Sphingomonas taxi: MC45_06015
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Entry
MC45_06015 CDS
T03398
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
stax
Sphingomonas taxi
Pathway
stax03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
stax00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MC45_06015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stax03021
]
MC45_06015
03400 DNA repair and recombination proteins [BR:
stax03400
]
MC45_06015
Enzymes [BR:
stax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MC45_06015
Transcription machinery [BR:
stax03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MC45_06015
DNA repair and recombination proteins [BR:
stax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MC45_06015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
AIT06027
UniProt:
A0A097EEM9
LinkDB
All DBs
Position
1341477..1345631
Genome browser
AA seq
1384 aa
AA seq
DB search
MASKAIQGSTAKRRIRKIFGDIHEVIQMPNLIEVQRESYEQFLRSDKSTGHVSGLEKTLR
SVFPIQDFAGTAYLDFDDYVLEPPKFDVEECRQRGITYAAPMRVTLRLTAFEVDPDTEAK
SVIDIKEQDVYMGDMPLMTENGTFFINGTERVIVSQMHRSPGVLFDHDRGKTHASGKYLF
AARVIPYRGSWLDFEFDAKDIVNVRIDRKRKLPVTALLYALGMTSEDILNYFYNRVTYVR
GQGGWIIPFAPENWRGVKPLFDIVDASSGEVVFAAQQKISPRAANKAAKDGLTQLLIPTE
EIFGRYSAYDLINETTGEIYVEAGDEIGAENLEALDKAGIDTIELLDIDHVSTGAWIRNT
LKADKAEEREQALSDIYRVMRPGEPPTLETAEALFAGLFFDPDRYDLSAVGRVKLNMRLD
LDCPDTVTTLRSEDILAVIKTLVGLKDGKGEIDDIDNLGNRRVRSVGELLENQYRVGLLR
MERAVKERMSSVDVSTVMPNDLINAKPAVAAVREFFGSSQLSQFMDQTNPLSEVTHKRRV
SALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLASFSRVNKYGFIETP
YRKVVDHKVTDDVVYLSAMEEAKHTIAQASAELGPDKGFTEELVSSRQAGEFLMALPDNV
TLMDVSPKQLVSVAASLIPFLENDDANRALMGSNMQRQAVPLVKAEAPFVGTGMEETVAR
DSGAAIAAKRAGIVDQVDASRIVVRATGEVDSAKSGVDIYTLMKFQRSNQSTCINQRPLV
KVGDVVNAGDVIADGPSTEFGELALGRNALVAFMPWNGYNYEDSILISERIVKDDVFTSI
HIDEFEVMARDTKLGPEDITRDIPNVGEEALRNLDEAGIVYVGAEVEPGDILVGKITPKG
ESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGVAGTIVDVRVFNRHGIDKDERAMAIERE
EIERLKKDSDDERTILNRATWSRLREMLLDQVATAVPKGLKKGATIDMDLLDSVDRHEWW
KFAVADDKVQGDLEAVKQQYDEAAKRITDKFHDRREKLERGDELPPGVLKMVKVFVAVKR
KLQPGDKMAGRHGNKGVISRILPQEDMPFLADGTPVDLVLNPLGVPSRMNVGQIFETHLG
WAARNLGMQVATALEDWREANPDAKAGEMPDAVRSRLVEVYGDHYAEDIQSREPEEIVEL
VKNIRTGIPMGTPVFDGARESDVSAMLELAGLDTSGQSELFDGRTGDKFDRKVTVGIIYM
LKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALQAYGAAYTLQEMLT
VKSDDVVGRTKVYEAIVKGDDTFEAGIPESFNVLVKEMRSLGLNVDLKTMQDQVDEDGIA
IAAE
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaaggcgatccagggcagcaccgcgaagcggcgcatccgcaagatcttcggg
gacatccacgaagtcatccagatgccgaacctgatcgaggttcagcgcgagagctacgaa
cagttcctgcgttcggacaagagcaccggccacgtgtcgggtctcgaaaagacgctgcgc
agcgtcttcccgatccaggatttcgccggcaccgcctatctcgacttcgacgactatgtt
ctcgagccgccgaagttcgacgtcgaggaatgccgccagcgtggcatcacctatgccgcg
ccgatgcgcgtcacgctgcgcctgaccgcgttcgaggtcgatccggataccgaggccaag
tcggtcatcgatatcaaggagcaggacgtctacatgggcgacatgccgctcatgaccgag
aacggcaccttcttcatcaacggcaccgagcgcgtcatcgtgtcgcagatgcaccgttcg
ccgggcgtgctgttcgaccatgaccgcggcaagacccatgcctcgggcaagtatctcttc
gccgcgcgcgtcatcccctatcgcggctcgtggctcgacttcgagttcgacgccaaggac
atcgtcaacgtccgtatcgaccgcaagcgcaagctgccggtgacggcgctgctctatgcg
ctcggcatgaccagcgaggacatcctcaattacttctacaaccgcgtcacctatgtgcgc
ggccagggcggctggatcatcccgttcgcgccggagaactggcgtggcgtcaagccgctg
ttcgacatcgtcgacgcctcgtcgggcgaggtcgtgttcgccgcgcagcagaagatcagc
ccgcgtgccgccaacaaggcggccaaggacggcctcacccagctgctgatcccgaccgaa
gagatcttcggccgctactcggcctatgaccttatcaacgagacgacgggcgagatctac
gtcgaggccggtgacgagatcggcgccgagaatctcgaggcgctcgacaaggcgggcatc
gacacgatcgagctgctcgacatcgaccatgtctcgaccggggcgtggatccgcaacacg
ctcaaggccgacaaggccgaggagcgcgagcaggcgctcagtgacatctatcgcgtcatg
cgccccggcgagccgccgacgctcgagaccgccgaggcgctgttcgccggcctgttcttc
gatccggaccgctacgatctgtcggcggtgggtcgcgtcaagctcaacatgcgcctcgac
ctcgactgcccggatacggtgacgacgctgcgcagcgaggacatcctcgccgtcatcaag
acgctcgtcggcctgaaggacggcaagggcgagatcgacgacatcgacaacctcggcaac
cgccgcgtgcgttcggtgggcgagctgctcgagaaccagtatcgcgtcggcctgctccgc
atggagcgcgccgtgaaggagcgcatgagctctgtcgacgtgtcgacggtgatgccgaac
gacctcatcaacgccaagccggcggtcgccgcggtgcgcgaattcttcggctcgtcgcag
ctgtcgcagttcatggaccagaccaacccgttgtccgaagtgacgcacaagcgtcgtgtt
tcggcgctcgggccgggcggtctgacgcgcgagcgtgcgggcttcgaggtccgcgacgtt
cacccgacgcattacggccgcatctgcccgatcgagacgccggaaggcccgaacatcggc
ctgatcaacagcctcgcctcgttcagccgcgtcaacaaatacggcttcatcgagacgccg
taccgcaaggtcgtcgaccacaaggtcaccgacgacgtggtgtatctgtcggcgatggaa
gaggccaagcacacgatcgcgcaggcctcggcagagctgggtccggacaagggcttcacc
gaggagctggtgtcgtcgcgtcaggcgggcgagttcctgatggcgctccccgacaacgtc
acgctgatggacgtcagccccaagcagctggtgtcggtcgccgcgtcgctcattccgttc
ctggaaaacgacgacgccaaccgcgcgctgatgggctcgaacatgcagcgtcaggccgtg
ccgctggtgaaggcggaagcgccgttcgtcggcaccggcatggaagagacggtcgcccgt
gactcgggcgccgcgatcgccgccaagcgcgccggcatcgtcgaccaggttgacgccagc
cgcatcgtcgtgcgcgccaccggtgaggtcgattcggccaagtcgggcgtcgacatctac
acgctgatgaagttccagcgctcgaaccagtcgacctgcatcaaccagcgtccgctggtg
aaggtgggcgacgtggtcaacgccggcgacgtcatcgccgacggcccgtcgaccgaattc
ggcgagctggcgctgggccgcaacgcgctcgtcgcgttcatgccctggaacggctacaac
tatgaggattcgatcctcatcagcgagcggatcgtgaaggacgacgtgttcacgtcgatc
catatcgacgagttcgaggtgatggcccgtgacacgaagctcgggcccgaggacatcacg
cgcgacatccccaacgtcggcgaggaagcactgcgcaacctcgacgaggcgggcatcgtc
tacgtgggcgccgaggtcgagccgggcgacatcctcgtcggcaagatcacgccgaagggc
gagagcccgatgaccccggaagaaaagctcctccgcgccatcttcggtgagaaggcgtcc
gacgtccgcgacacctcgctgcgtctgccgccgggcgttgccggcacgatcgtcgacgtc
cgcgtcttcaatcgtcacggcatcgacaaggacgagcgcgcgatggcgatcgagcgcgag
gagatcgagcgcctgaagaaggactcggacgacgagcgcaccatcctcaaccgcgcgacc
tggtcgcgcctgcgcgagatgctgctcgatcaggtcgccacggcggtgccgaagggcctg
aagaagggcgcgacgatcgacatggacctgctcgacagcgtcgaccgccacgaatggtgg
aagttcgcggtcgccgacgacaaggtccagggcgatctggaagccgtcaagcaacagtat
gacgaagccgccaagcggatcacggacaagttccacgatcgtcgcgagaagctggagcgt
ggcgacgagctgccgcccggcgtgctcaagatggtcaaggtcttcgtcgcggtgaagcgc
aagctgcagccgggcgacaagatggccggccgtcacggcaacaagggcgtcatcagccgc
atcctgccgcaggaggacatgccgttcctcgccgacgggacgccggtcgatctggtgctc
aacccgctgggcgtgccgtcgcgcatgaacgtcgggcagatcttcgaaacgcatctcggc
tgggccgcccgcaatctgggtatgcaggtcgcgaccgcgctcgaggattggcgcgaggcc
aaccccgacgccaaggcgggcgagatgcccgacgcggtccggtcgcgcctcgtggaagtc
tatggcgatcattatgccgaggacatccagagccgcgagcccgaggagatcgtcgagctg
gtcaagaacatccggaccggcatcccgatgggcaccccggtgttcgacggcgcccgcgag
agcgacgtgtcggcgatgctggagctggcgggtctcgacacgtcgggccagtcggagctg
ttcgacggccgcaccggcgacaagttcgaccgcaaggtgaccgtcggcatcatctacatg
ctgaaactgcaccatctcgtggacgacaagatccacgcccggtcgatcgggccgtacagc
ctcgtcacccagcagccgctgggcggcaaggcgcagttcggtggccagcgcttcggtgag
atggaggtctgggccttgcaggcatacggcgccgcctacaccttgcaggagatgctgacg
gtgaagtccgacgacgtcgtcggccgcaccaaggtctatgaggcgatcgtcaagggcgac
gacacgttcgaggccggcatccccgagagcttcaacgtgctcgtcaaggaaatgcgctca
ctgggtctcaacgtcgatctcaagacgatgcaggaccaggtcgacgaggacggcatcgcg
atcgccgcggagtga
DBGET
integrated database retrieval system
