KEGG   Sphingomonas taxi: MC45_06320
Entry
MC45_06320        CDS       T03398                                 
Name
(GenBank) RNA-binding protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
stax  Sphingomonas taxi
Pathway
stax02024  Quorum sensing
stax03060  Protein export
stax03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:stax00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    MC45_06320
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    MC45_06320
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    MC45_06320
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:stax02044]
    MC45_06320
Enzymes [BR:stax01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     MC45_06320
Secretion system [BR:stax02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   MC45_06320
  Eukaryotic Sec-SRP protein
   MC45_06320
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA AAA_22 Zeta_toxin AAA_16 AAA_33 AAA_31 DnaB_C ABC_tran AAA_14 AAA_19 AAA_24 APS_kinase AAA ResIII cobW AAA_17 ArsA_ATPase Thymidylate_kin AAA_28 NACHT nSTAND3 MMR_HSR1 AAA_5 ATPase
Other DBs
NCBI-ProteinID: AIT06074
UniProt: A0A097EES8
LinkDB
Position
complement(1422958..1424478)
AA seq 506 aa
MFDSLSDRLGGVFDRLRGRGALTEADVRTAMREVRVALLEADVALPVARSFVDKVTEQAV
GQNVLRSVTPGQQVVKIVNDALVEMLGADASELELSVTPPAVVMMVGLQGSGKTTTTAKI
AKRLVARERKKVLMASLDVNRPNAQEQLATLGTQIEVATLPIIAGQQPVDIARRALQAAK
LQGFDVLMLDTAGRLHVDQALMDEMKAVAEIATPQEILLVVDSLTGQDAVNVAQNFSEQV
PLTGVVLTRMDGDARGGAALSMRAVTGKPIKFAGTGEKLDALEAFHPSRVAGRILGMGDV
VSLVERAAESIQQEDAERMTARLAKGQFDMNDLRGQLQQMRRMGGLGALAGMMPGMKKAQ
GALATAGGDKMLIHMEAMIGSMTLKERAKPELINAKRKIRIAKGSGTTVQEVNKVLKMHQ
EMSTAMKKIKKMGGLKGMMAMLGKGGPRGGMSGLGNALGGAGLGDMMEKAGGGAGGGLPK
GLPGLGGGQDGMPKLPPGFENLLKKK
NT seq 1521 nt   +upstreamnt  +downstreamnt
atgttcgacagtctgagcgaccggctaggcggagtattcgaccgtctgcgtggccgtggc
gcgctgaccgaggccgatgtgcggaccgcgatgcgcgaagtgcgcgtcgcgctgctcgag
gccgacgtcgcgctgccggtggcgcgcagcttcgtcgacaaggtcaccgaacaggcggtc
ggccagaacgtgcttcgctcggtcacgccggggcagcaggtcgtcaagatcgtcaacgac
gcgctggtcgagatgctcggcgccgacgcgtcggagctcgaactgtcggtcacaccgccc
gcggtggtgatgatggtcggcctgcagggctcgggcaagacgacgaccaccgccaagatc
gccaagcgcctcgtcgcccgcgagcgcaagaaggtgctgatggcgtcgctcgacgtcaat
cgccccaatgcgcaggaacagctcgcgacgctgggtacgcagatcgaggtggcgacgctg
ccgatcatcgccggccagcagccggtcgatatcgcccgccgcgcgctccaggccgccaag
ctccagggcttcgacgtgctgatgctcgacaccgcgggtcgcctgcacgtcgatcaggcg
ttgatggacgagatgaaggcggtggcggagatcgctacgccgcaggaaatcctgcttgtc
gtcgattcgctgaccggtcaggacgcggtcaacgtcgcgcagaacttctccgaacaggtg
ccgctgaccggcgtcgtgctgacccggatggacggcgacgcgcgcggcggtgccgcattg
tcgatgcgcgccgtcaccggcaagccgatcaagtttgccggcaccggcgaaaagctcgac
gcgctcgaggccttccaccccagccgcgtcgccggccgcatcctcggcatgggcgacgtc
gtcagcctcgtcgagcgtgccgccgaatcgatccagcaggaagacgccgagcgaatgacc
gcgcggctcgccaagggtcagttcgacatgaacgacctgcgcggccagctccagcagatg
cgccgcatgggtggcctcggcgcgctcgccggcatgatgccggggatgaagaaggcgcaa
ggcgcgctcgccaccgcgggcggcgacaagatgctcatccatatggaagcgatgatcggc
tcgatgacgctgaaggagcgcgccaagcccgaactcatcaacgccaagcgcaagatccgc
atcgccaaaggctccggcacgacggtgcaggaggtcaacaaggtcctgaagatgcatcag
gaaatgtcgaccgccatgaagaagatcaagaaaatgggcggcctcaagggcatgatggcg
atgctcggcaagggtggcccgaggggcggcatgtccggcctcggcaatgccctcggcggc
gccggcctcggcgacatgatggagaaagccgggggtggggccggcggcggcctgcccaag
ggtctccccggcctcggcggcggccaggacggcatgcccaaactgccccccggcttcgaa
aatcttctcaagaagaaataa

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