Streptococcus pasteurianus: SGPB_0388
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Entry
SGPB_0388 CDS
T01524
Name
(GenBank) predicted membrane protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
stb
Streptococcus pasteurianus
Pathway
stb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SGPB_0388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stb03019
]
SGPB_0388
Messenger RNA biogenesis [BR:
stb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SGPB_0388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_PNO1_2nd
HDOD
KH_NusA_2nd
KH_2
KH_KhpA-B
ATP-synt_B
dUTPase
Motif
Other DBs
NCBI-ProteinID:
BAK29515
UniProt:
F5X525
LinkDB
All DBs
Position
406648..408255
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AA seq
535 aa
AA seq
DB search
MPNIIILIVFALIGLIVGYALISVRLKSAKEAAELTLLNAEQDAVNLRGQAELEAEQIRK
TAERESKSYRKELLIEAKEEARKYREEIEKEFKSERQELKQMETRLTERASSLDRKDENL
TSKEKVLDSKEQSLTDKSRHINEREKQIGELEEQKKAELERVALMTIAEAREIILTETET
NLTHEIATRIKDAEREVRDKSSKLAKNILAQAMQRMAGEYVTEQTITTVHLPDDSMKGRI
IGREGRNIRTLESLTGIDVIIDDTPEVVVLSGFDPIRREIARMTLEALIQDGRIHPARIE
ELVEKNRLEMDNRIREYGEAAAFEIGALNLHPDLIKIMGRLQFRTSYGQNVLRHSVEVGK
MAGILAGELGENVTLARRAGFLHDMGKAVDREVEGSHVEIGTELAHKYKENPIVVNAIAS
HHGDVEPESVIAVIVAAADALSSARPGARNESMENYIKRLRDLEEIATSFEGVQNSYALQ
AGREIRIMVQPTKVSDDEVTILAHKVREKIEGNLDYPGNIKVTVIRELRAVDYAK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatattattatcttgattgtttttgccctcattggtttgatagttggttatgcg
ttgatttcagttagacttaagtctgcgaaagaagcggcagaactcactcttttaaatgca
gaacaagacgctgttaatctacgtggtcaagcggagttagaagctgagcaaatcagaaaa
acagccgaacgagaaagtaaatcatatcgtaaagaattactaatcgaggcaaaagaagag
gctagaaaatatcgtgaagagattgaaaaagaatttaaatctgaaaggcaagagttaaaa
caaatggaaactcgtttgacagaacgagcttcttctcttgaccgcaaggatgaaaaccta
accagcaaggaaaaagtgttggatagtaaagaacaaagtctaaccgataaatctagacac
attaatgagcgtgaaaaacaaatcggagaactagaagaacagaaaaaagcagaacttgaa
cgtgtagcgctcatgacgattgctgaagcgcgtgaaattattttaacggaaacagaaact
aatttgacgcacgaaattgctactcgtatcaaagatgctgaacgtgaagtccgagataaa
tctagcaaacttgctaaaaatattctcgcgcaagctatgcaacgtatggcaggtgaatat
gttactgaacaaactattacaacagttcacttaccagacgatagcatgaaaggtcgtatc
attggacgtgaaggacgtaatatccgcacacttgaaagtttgacaggaattgacgttatc
attgatgatacccctgaagttgttgttctttcaggatttgatccgattcgtcgtgaaatc
gctcgaatgactttggaagctttgattcaggacggacgtattcacccagctcgtatcgag
gaattggttgaaaaaaatcgtttggaaatggataaccgtattcgtgaatatggtgaggct
gctgcatttgaaattggagcccttaacttgcaccctgatttgattaaaatcatgggacgc
ctgcaatttagaacatcatacggtcaaaacgtcttacgtcattctgtcgaagttggtaag
atggcaggtattctcgcaggggaacttggagaaaacgtaacacttgctcgtcgtgccggt
ttcttgcatgatatggggaaagccgttgaccgtgaggttgagggaagccacgttgaaatc
ggaacggaacttgctcataaatacaaggaaaatccgattgtcgttaatgccattgctagt
caccacggtgatgtagaaccggaaagtgttatcgctgtgattgttgcagctgcagatgcg
cttagctcagctcgtccaggtgctcgtaacgaatcaatggaaaattacatcaaacgcctt
cgtgatttggaagaaattgccacaagctttgaaggtgtccaaaatagctatgctttgcaa
gcaggacgtgaaattcgtatcatggtgcaaccaactaaagtttctgatgatgaggtaaca
atcttagctcacaaagttcgtgaaaaaattgaaggtaatcttgattacccgggtaacatt
aaagttaccgttattcgtgaacttcgtgcagttgattatgcaaaataa
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