Streptomyces sp. BRB040: ABDE16_29565
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Entry
ABDE16_29565 CDS
T11010
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
stbr Streptomyces sp. BRB040
Brite
KEGG Orthology (KO) [BR:
stbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
stbr03051
]
ABDE16_29565 (pafA)
Enzymes [BR:
stbr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
ABDE16_29565 (pafA)
Proteasome [BR:
stbr03051
]
Prokaryotic proteasome
Bacterial regulatory particles
ABDE16_29565 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Ribosomal_L19
HTH_25
Motif
Other DBs
NCBI-ProteinID:
XAR13753
LinkDB
All DBs
Position
6651986..6653347
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AA seq
453 aa
AA seq
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MDRRIFGLENEYGVTCTFRGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDNVTELVTHDKAGERILEGLLVDAERRLHEEGIAGDVYLFKNNTDSAGNSY
GCHENYLVARHGEFSRLADILIPFLVTRQLLCGAGKVLQTPRGAVYCVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMSETTMLLKVGATDLVLRMIEAGTVM
RDLTLENPIRAIREVSHDITGRRKVRLASGREASALEVQREYYEKAVDFVDRRGIRTGTV
ERVLELWGRTLEAIENEDLDRIDTEIDWVMKYKLLERYRAKHNMTMSHPRVAQIDLAYHD
IHRRRGLYYLLERKGQAARVANDLKIFEGKSVPPQTTRARLRGDFIRRAQEQRRDFTVDW
VHLKLNDQAQRTVLCKDPFRSVDDRVEKLIAGM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaccgccgcattttcgggctggagaacgagtacggcgtcacgtgcacgttcagggga
cagcgccgcctgtcgcctgacgaggtggcgcggtacctcttccgccgtgtcgtgtcatgg
ggccgcagcagcaacgtctttctgcgcaatggcgcccgcctgtatctcgacgtgggatca
catccggaatacgcgacacccgagtgtgacaacgtgaccgaactcgtcacccacgacaag
gcgggcgagcgcattctcgaaggactcctggtggacgccgaacgacgcctgcacgaggag
ggaatcgcgggcgacgtctacctcttcaagaacaacaccgactccgcgggcaactcgtac
ggttgtcacgagaattatctcgtggcccggcacggggagttttcgcggctcgcggacatc
ctcattccgttcctggtgacgaggcagttgctctgtggtgccggcaaggtgctgcagacg
ccgcgcggtgcggtgtactgcgtcagccagcgggccgagcacatctgggagggcgtctcc
tcggcgacgacccggtcccggccgatcatcaacacgcgtgacgagccgcacgccgacgcg
gagcgctaccggcggctgcacgtcatcgtgggcgactcgaacatgtccgagacgaccatg
ctgctcaaggtcggcgcgaccgacctggtgctgcgcatgatcgaggcgggcacggtgatg
cgggacctgaccctggagaacccgatccgggcgatccgcgaggtcagccacgacatcacc
gggcggcgcaaggtgcgcctggccagcggccgggaggcgtccgcgctggaggtgcagcgg
gagtactacgagaaggccgtcgacttcgtcgaccgccgcggtatccgcaccggcaccgtg
gagcgggtgctggagctgtggggccgcacactggaggcgatcgagaacgaggacctcgac
cgtatcgacaccgagatcgactgggtcatgaagtacaagctgctggagcggtaccgggcc
aagcacaacatgaccatgtcgcatccgcgggtcgcgcagatagacctcgcgtaccacgac
atccaccgtcgtcgtggtctgtactacctgctcgagaggaaggggcaggccgcccgggtc
gccaacgacctgaagatcttcgagggcaagtccgtcccgccgcagaccactcgggcccgg
ctgcgcggcgacttcatccggcgagcccaggagcagcgccgggacttcaccgtcgactgg
gtccatctgaagctcaacgaccaggcgcagcgcaccgtgttgtgcaaggacccgttccgt
tcggtggacgaccgggtggagaagctgatcgccggtatgtga
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