Streptomyces sp. BRB040: ABDE16_29980
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Entry
ABDE16_29980 CDS
T11010
Symbol
cobT
Name
(GenBank) nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
KO
K00768
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:
2.4.2.21
]
Organism
stbr Streptomyces sp. BRB040
Pathway
stbr00860
Porphyrin metabolism
stbr01100
Metabolic pathways
stbr01240
Biosynthesis of cofactors
Module
stbr_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
stbr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
ABDE16_29980 (cobT)
Enzymes [BR:
stbr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.21 nicotinate-nucleotide---dimethylbenzimidazole phosphoribosyltransferase
ABDE16_29980 (cobT)
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Gene cluster
GFIT
Motif
Pfam:
DBI_PRT
Nitroreductase
Motif
Other DBs
NCBI-ProteinID:
XAR13826
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Position
6737311..6741033
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AA seq
1240 aa
AA seq
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MTDTGQIPGEGLPENAGMVEQPGVPAPGAYTYLSEATTEDEDLLLLPGAQSAWGNEVAPP
APEPVVETVHQPGPHEMAGRDSGSVDLSGVRLPDPAQDAASAPAPPRRPLHLGPPIPDTS
ASPVRSLADRGPADAPVRHPGPPTAGPEYLDVPQAAVATPQAAAPWGAQQTAPQAQEVPV
NAGAGHAETVVPVPEQQSAEPVGAAQALVTRVATEAVAATGGAAAGTDAGEPGEPREEAV
PEAAQTVPEAVPAVPEAAAQDGQAEQGGPVVHAVQEDPAEPPAPHAEPEQDAASVQDAVP
VQGAVPAPEPVAAEPVSAPAPEAQETPGQPVPEEAPAEAPQGPEESQGPEEPQAADATAA
PAPQEAAPSEAPGPEAADAQAPDAPEAVEAPGVPGVPAPGPSPVQESQEAPEQPAPVQEA
PAQPQPVAQPAPEAPAPQPAQGPQSLVNAEVPQEQKQEQEQEPALGEKREDEQPQPQEVP
VAEAAHEPVGTEAAATGTPGTTAQEPLPAPARGPVVPEAHPGGPGGQFVPVDGGQVPTTP
HLAPTPLEAVLVPPEAPAPEQPAAEPFAAEPAAAVPAPRESDPGLLQSADDLDTRGAGQE
DHEAEAADTARAPQAPHVDPAPQDVPGAQEVPAPQEVLAPQEAPHEAPDEASPAEAAEAP
RSAGPAAPAYDDAERAAVLKVMRERRDIRNGFRGDPIPHEVLLRVLEAAHTAPSVGHSQP
WDFVVIRSADTRRAMHELATRQRDAYAKSLPKGRAKQFKELKIEAILDTPVNIVVTADPT
RGGRHTLGRHTQPQMAPYSSALAVENLWLAARAEGLGVGWVSFFDEREMVRALGLPEHLD
VVAYLCVGYVDEFPDEPELMQAGWSKRRPLSWVVHEETYGRRALPGEAPHDLLAETVAQI
RPLDAKALGEAWERQKRMTKPAGALGMLEIISAQLSGLSRQCPPPIPEPAAVAVFAGDHG
VHAQGVTPWPQEVTAQMVANFLGGGAVCNAFATQVGAEVCVVDVGVATDLPATPGLLPRK
VRAGTSDMTTGAAMTREEAKQAIEVGIETARDLVAAGNKALLTGEMGIANTTASAALISV
FTGADPAEVTGRGTGINDETLVRKTEVVRRALELHQPDPADPIGVLAAIGGFEHAAMVGL
LLGGASLRTPVILDGVSAGAAALVARAIAPEVLAACIAGHRSAEPGHVAALNKLGLRPLV
DLDLRLGEGTGALLALPMVQSTARAMHEVATFDSAGVTEK
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaccggccagatcccgggcgaggggctgccggagaacgcaggcatggtggag
cagccgggcgtccccgcacccggcgcgtacacctacctctccgaggccaccaccgaggac
gaggacctgttgttgctgccgggagcccagagtgcctggggcaacgaggtcgctccgccg
gcgccggagccggtcgtcgagaccgtccaccagcccggcccgcacgagatggccggtcgc
gacagcggctcggtcgacctcagtggcgtccgcctgcccgacccggcgcaggacgccgcg
tccgccccggccccgccgcgcagacccctccacctcggtccgccgatcccggacacctcc
gccagcccggtccgctccctcgccgaccgcggccccgccgacgcaccggtacggcatccc
ggcccgccgaccgcggggcccgagtacctcgacgtcccgcaggccgccgtggcgaccccg
caggcggcggcgccctggggggcccagcagacggcaccgcaggcccaggaggtcccggtg
aacgccggggcggggcatgcggaaacggttgttccggtaccggagcagcagtcggccgag
ccggtgggcgcggcccaggcgctggtgacccgcgtggcgacagaggccgtggcggcgacg
ggcggggcggccgcgggcacggacgccggggagcccggcgaaccgcgcgaggaggccgtg
ccggaggcggcgcagaccgtgcccgaggcggtgccggccgtgcccgaggcggctgcgcag
gacggacaggccgagcagggcggtccggtcgtgcacgccgtgcaggaggaccccgccgaa
ccgcccgccccgcacgccgaaccggagcaggacgccgcttccgtgcaggacgccgttccc
gtgcagggcgccgtaccggcccccgagccggtcgccgcggagcccgtgagcgcgcccgcc
ccggaggcccaggagactcccgggcagccggtaccggaggaggcaccggcggaagcaccg
cagggccccgaggagtcgcagggccccgaggagccccaggcggccgacgccacggcggca
cccgcgccgcaggaagccgcgccctccgaggcacccgggcccgaggccgccgacgcccag
gcgccggacgcacctgaggccgtcgaggcgcccggggtgcccggggtgcccgcacccggg
ccgtccccggtccaggagagccaggaggcccccgagcagcccgcgcccgtccaggaggcg
cccgcccagccgcaacctgtggcgcagcccgctccggaggcccccgcgccacagcccgcc
cagggcccccagtccctcgtgaacgccgaagtaccgcaggagcagaagcaggagcaggag
caggaaccggcgctgggagagaagcgcgaagacgagcagccgcagccgcaggaggtgccc
gtggccgaggccgcgcacgagcccgtagggaccgaggcggccgccaccggcacccccggc
accaccgcacaggagccgctgcccgcaccggcccggggccccgtcgtcccggaggcgcac
cccggcgggcccggggggcagttcgtgcccgtcgacggcggtcaggtacccacgaccccg
cacctcgcgcccacgccgctcgaagccgttctcgtcccgccggaggccccggcaccggag
cagcccgccgcggaaccgttcgccgcggaacccgcggccgcggtaccggcgccgcgcgag
tccgaccccggactcctccagagcgccgacgacctggacacccgcggcgccggccaggag
gaccacgaggccgaagcggcggacacggcgcgagcgccccaggcgcctcacgtggacccc
gcgccccaggacgtacccggtgcgcaggaagtccccgcgccgcaggaagtcctcgcgccg
caggaggccccgcacgaggcccccgacgaagcgagcccggccgaggccgcggaagcaccg
cggtccgcgggaccggcggcacccgcctacgacgacgccgagcgcgcggccgtactgaag
gtcatgcgcgagcgccgcgacatccgcaacggcttccgcggcgaccccatcccgcacgag
gtgctgctccgggtcctggaggccgcgcacaccgcgccctccgtcggccactcccagccc
tgggacttcgtcgtgatccgctcggccgacacccgccgggcgatgcacgaactggcgacg
cgtcagcgcgacgcgtacgccaagtcgctgcccaagggccgggccaagcagttcaaggaa
ctgaagatcgaggccatcctcgacaccccggtcaacatcgtcgtcaccgccgacccgacc
cgcggcggccggcacaccctgggccgccacacccagccgcagatggcgccgtactcctcc
gcgctcgccgtcgagaacctgtggctcgccgcccgcgccgagggcctcggcgtcggctgg
gtcagcttcttcgacgagcgcgagatggtccgcgccctcggcctgcccgagcacctggac
gtcgtcgcctacctgtgtgtcggctacgtcgacgagttcccggacgagcccgagctgatg
caggccggctggtccaagcgccgcccgctgtcctgggtggtccacgaggagacgtacggc
cgtcgggccctgcccggcgaggcgccgcacgacctgctcgccgagaccgtggcgcagatc
cgcccgctggacgccaaggcgctcggcgaggcctgggagcggcagaagcggatgacgaag
ccggccggcgcgctcggcatgctggagatcatctccgcccagctgtccggactgtcccgg
cagtgcccgccgcccatcccggagcccgcggccgtcgcggtcttcgccggcgaccacggc
gtgcacgcccagggcgtcaccccctggccgcaggaggtcaccgcccagatggtggccaac
ttcctgggcgggggagcggtgtgcaacgccttcgccacccaggtcggcgccgaggtgtgc
gtcgtggacgtcggtgtcgccaccgacctgcccgccacgccgggcctgctgccgcgcaag
gtgcgtgcgggcacgtccgacatgaccaccggcgccgcgatgacccgcgaggaggccaag
caggccatcgaggtcggcatcgagaccgcccgcgacctggtggcggccggcaacaaggcg
ctgctcaccggcgagatgggcatcgcgaacaccaccgcgtccgccgcactcatctccgtg
ttcaccggcgccgacccggccgaggtcaccggtcgcggcaccggcatcaacgacgagacg
ctggtccgcaagaccgaggtcgtgcgccgcgccctggaactccaccagcctgacccggcc
gacccgatcggcgtgctcgcggcgatcggcggcttcgagcacgcggccatggtcggcctg
ctgctcggcggcgcgtccctgcgcaccccggtgatcctggacggcgtcagcgccggcgcc
gccgccctggtggcccgcgcgatcgcccccgaggtcctggcggcctgcatcgccggtcac
cgcagcgccgagcccggccacgtcgccgcgctcaacaagctgggcctgcgaccgctggtc
gacctcgacctccgcctcggcgagggcaccggcgcgctgctcgcgctcccgatggtgcag
agcaccgcgcgggccatgcacgaggtggcgacgttcgactcggcgggcgtcaccgagaag
tag
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