Streptomyces sp. CA-256286: JHY03_28590
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Entry
JHY03_28590 CDS
T11337
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
stcz Streptomyces sp. CA-256286
Pathway
stcz00040
Pentose and glucuronate interconversions
stcz01100
Metabolic pathways
stcz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
stcz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
JHY03_28590
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JHY03_28590
Enzymes [BR:
stcz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
JHY03_28590
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Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
QTA32698
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All DBs
Position
complement(3247360..3248703)
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AA seq
447 aa
AA seq
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MPARKRHTRAIAVTLGCASLALALSTPARATAHPHHPGPGVERAVLPAGDGWAAAEGSTT
GGANATPDHVYTVTDRAQLIAAFAEAGDAPKIIRISGTVHGNSDVHGTPIGCDEYRTGGY
TLEKYLAAYDPEVWGRDTVPSGPLEEARAASAKLQAAAVNIKVPSNTTLVGVGKNPKIIG
AGLQVRDVSNVIIRNIGFEDTYDCFPQWDPTDGAGGAWNAEYDNLVVYGSRHVWVDHNTF
SDGDRPDADQPHYFGQVYQQHDGLFDIVRGADLVTVSWNVLKDHDKTMLIGNSDGAGATD
RGKLRVTLHHNLFKDVKERAPRVRFGQVDSYNNHFVATRGSAYGYTYGIGAESRLVAEHN
AFTLAREVDRATILKKWSESSLTAENNYVNGRKTDLVAVHNAGVPAEQLTEGAGWTPGLR
TSVHHPLVVPVVVALKAGAGKASVTGH
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcacgcaagcgccacacccgcgccatcgcggtgaccctgggctgtgcctccctg
gccctcgccctcagcaccccggcccgggccaccgcccacccgcaccaccccggtccgggc
gtcgagcgcgccgtactgcccgccggggacggctgggccgccgccgagggctccaccacg
gggggcgcgaacgccacccccgaccacgtctacacggtgaccgaccgggcccaactcatc
gccgccttcgcggaggcgggcgacgcaccgaagatcatcaggatctccgggaccgtgcac
ggcaactccgacgtccacggcacgccgatcggctgcgatgagtaccggacgggcggctac
acgctggagaagtacctcgccgcctacgaccccgaggtctggggccgggacacggtcccc
tcgggtccgctggaggaggcccgcgccgcctccgcgaagctgcaggcggccgccgtcaac
atcaaggtgccctccaacaccaccctggtcggcgtcgggaagaacccgaagatcatcggc
gccgggctccaggtgagagacgtctccaacgtcatcatccgcaacatcggcttcgaggac
acctacgactgcttcccccagtgggaccccacggacggggccgggggcgcctggaacgcg
gagtacgacaacctcgtcgtgtacggctcccgccatgtctgggtcgaccacaacacgttc
agcgacggcgaccgccccgacgccgaccagccccactacttcggccaggtgtaccagcag
cacgacggcctcttcgacatcgtgcgcggcgccgacctggtcaccgtctcgtggaacgtc
ctcaaggaccacgacaagaccatgctcatcggcaacagcgacggcgccggggccaccgac
cggggcaagctccgcgtcacgctccaccacaacctcttcaaggacgtcaaggagcgggcc
ccgcgcgtgcggttcggccaggtcgactcgtacaacaaccacttcgtggcgacgaggggc
agcgcctacgggtacacctacggcatcggcgcggagtcccgactggtcgcggagcacaac
gcgttcaccctcgcgcgggaggtggaccgggcgacgatcctgaagaagtggtcggagtcc
tcgctcacggcggagaacaactacgtcaacgggcggaagaccgacctggtcgccgtgcac
aacgcgggtgtgccggccgagcagctcaccgagggcgcgggctggacgcccggcctccgg
acgtcggtccaccacccgctcgtcgtgcccgtggtcgtggcgctcaaggcgggagcgggc
aaggcgagcgtgaccggccactga
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