Streptomyces sp. CA-256286: JHY03_37240
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Entry
JHY03_37240 CDS
T11337
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
stcz Streptomyces sp. CA-256286
Pathway
stcz00190
Oxidative phosphorylation
stcz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stcz00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
JHY03_37240
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JHY03_37240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stcz03019
]
JHY03_37240
Enzymes [BR:
stcz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
JHY03_37240
Messenger RNA biogenesis [BR:
stcz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
JHY03_37240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
DUF3509
AcetylCoA_hyd_C
Motif
Other DBs
NCBI-ProteinID:
QTA33536
LinkDB
All DBs
Position
complement(4193982..4196234)
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AA seq
750 aa
AA seq
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MSQQPSSEVPVQPAQPSVGSLAAHRPHAVAHSSSGNVGFSTAADLDPDLDADADAYEPDR
DGDELPQGRFLDRERSWLAFNERVLELAEDPATPILERANFLAIFASNLDEFFMVRVAGL
KRRIATGVATRSASGLQPREVLDLIWTRSRELMARHAACFQQDIAPALSDESIQLIRWPD
LTEKEQARLFTFFRQRVFPVLTPLAVDPAHPFPYISGLSLNLAVVVRNPVSGHRHFARVK
VPPLLTRFLEASPQRYVPIEDVIAAHLEELFPGMEVLAHHMFRVTRNEDLEVEEDDAENL
LQALEKELMRRRFGPPVRLEVEESIDPYVLDLLVRELKVSDAEVYPLPGPLDLTGLFAIA
SLDRPELKFPKFIAGTHRDLAEVESASAPDIFAALRERDVLLHHPYDSFSTSVQAFLEQA
AGDPDVLAIKQTLYRTSGDSPIVDALIDAAESGKQVLVLVEIKARFDEQANIKWARKLEE
AGCHVVYGLVGLKTHCKLSLVVRQEGDTLRRYSHVGTGNYHPKTARLYEDLGLLTADPQV
GADLSDLFNRLSGYSRRETYRRLLVAPKSLRDGLIARINKEIAHHRAGRPAYVRIKVNSM
VDEAIIDACYRAAQAGVPVDIWVRGICAIRPGVAGLSENIRVRSILGRFLEHSRVFSFGN
GGEPEVWFGSADMMHRNLDRRIEALVRVTDPAHRAALSRLLETGMADTTSSWHLGPDGNW
TRHATDAEGQPLRHVQEMLIDARRRRRATP
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcagcccagctccgaggtcccggtccagcccgcacagccgtccgtcggctcg
ctcgccgcgcaccggccgcacgccgtcgcccactcctcctccggcaacgtcggcttctcc
accgccgccgacctggaccccgatctcgacgccgacgccgacgcgtacgagcccgaccgg
gacggcgacgagctcccccagggccgtttcctggaccgcgagcgctcctggctcgccttc
aacgaacgcgtcctggagctggccgaggacccggcgacgccgatcctggagcgggccaac
ttcctcgcgatcttcgcctcgaacctggacgagttcttcatggtccgggtggccggcctc
aagcgccgcatcgccaccggtgtcgccacccgctccgcctccggcctccagccccgcgag
gtgctggacctgatctggacccgctcgcgcgagctcatggcccggcacgccgcctgcttc
cagcaggacatcgccccggccctctccgacgagtccatccagctgatccggtggccggat
ctgaccgagaaggagcaggcccgcctgttcaccttcttccggcagcgcgtcttcccggtc
ctgaccccgctggccgtcgaccccgcgcaccccttcccgtacatctccgggctctccctc
aacctggccgtcgtcgtccgcaacccggtcagcggccaccgccacttcgcccgggtcaag
gtcccgccgctgctgacccgcttcctggaggcgtccccgcagcgttacgtgcccatcgag
gacgtcatcgcggcccacctggaggagctgttcccggggatggaggtgctggcgcaccac
atgttccgggtcaccaggaacgaggacctggaggtcgaggaggacgacgcggagaacctg
ctccaggcgctggagaaggagctcatgcggcgccgcttcggcccgccggtccgcctggag
gtcgaggagtccatcgacccgtacgtcctcgatctgctggtccgcgagctgaaggtgtcc
gacgcggaggtctacccgctgcccggccccttggacctgaccggcctgttcgcgatcgcc
tcgctggaccggccggagctgaagttcccgaagttcatcgcgggcacccaccgggacctg
gccgaggtggagtccgcttccgcgcccgacatcttcgccgccctgcgcgagcgggacgtc
ctgctccaccacccgtacgactcgttctccacctccgtccaggcgttcctggagcaggcg
gcgggcgacccggacgtgctggccatcaagcagacgctgtaccgcacctccggcgactcc
ccgatagtggacgccctcatcgacgcggccgagtccggcaagcaggtcctcgtcctggtc
gagatcaaggcccgcttcgacgagcaggccaacatcaagtgggcccgcaagctggaggag
gcgggctgccatgtggtgtacgggctcgtcgggctgaagacccactgcaagctctcgctc
gtcgtccgccaggagggcgacaccctgcgccgctactcccacgtcggcaccggcaactac
caccccaagacggcgaggctgtacgaggacctcggcctgctcacggcggacccgcaggtc
ggggcggacctctccgacctgttcaaccggctctccggctactcccgccgcgagacctac
cgccgcctcctcgtcgccccgaagtcgctgcgggacgggctgatcgcccggatcaacaag
gagatcgcccaccaccgtgccgggcgccccgcctacgtacgcatcaaggtcaactcgatg
gtcgacgaagcgatcatcgacgcctgctaccgggcggcccaggccggcgtgcccgtcgac
atctgggtgcgcgggatctgcgccatccgccccggggtcgccgggctctcggagaacatc
cgggtccgctccatactcgggcgcttcctcgaacactcccgggtcttctccttcggcaac
ggcggcgaacccgaggtgtggttcggcagcgccgacatgatgcaccgcaacctcgaccgc
cggatcgaagccctcgtccgggtcaccgaccccgcccaccgcgccgcactcagccgactc
ctggagaccggtatggccgacaccacctcttcctggcacctgggccccgacggcaactgg
acccggcacgccacggacgcggaggggcagccgctgcggcacgtccaggagatgctcatc
gatgcccggaggcgcaggcgtgcgacgccctga
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