Streptococcus pseudopneumoniae: SPPN_03115
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Entry
SPPN_03115 CDS
T01590
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
std
Streptococcus pseudopneumoniae
Pathway
std03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
std00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPPN_03115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
std03019
]
SPPN_03115
03016 Transfer RNA biogenesis [BR:
std03016
]
SPPN_03115
Enzymes [BR:
std01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SPPN_03115
Messenger RNA biogenesis [BR:
std03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SPPN_03115
Transfer RNA biogenesis [BR:
std03016
]
Prokaryotic type
tRNA degradation factors
SPPN_03115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
S1_2
Hemerythrin
PCB_OB
SPATA25
DUF4404
Motif
Other DBs
NCBI-ProteinID:
AEL10063
LinkDB
All DBs
Position
574392..576605
Genome browser
AA seq
737 aa
AA seq
DB search
MTKQVFQTTFAGRELIVETGQVAKQANGSVVVRYGESTVLTAAVMSKKMATGDFFPLQVN
YEEKMYAAGKFPGGFMKREGRPSTDATLTARLIDRPIRPMFAEGFRNEVQVINTVLSYDE
NASAPMAAMFGSSLALSISDIPFDGPIAGVQVSYVDGQIIINPTQEQAEQSLLELTVAGT
KHAINMVESGAKELSEEIMLEALLKGHEAVKELIAFQEEIVAAVGKEKAEVELLHVAAEL
QAEIISAYNSDLQKAVQVEEKLAREAATQAVKDQVTAVYEEKYADHEEFDRIMRDVAEIL
EQMEHAEVRRLITEDKVRPDGRKVDEIRPLDAVVDFLPRVHGSGLFTRGQTQALSVLTLA
PMGETQIIDGLDPEYKKRFMHHYNFPQYSVGETGRYGAPGRREIGHGALGERALAQVLPS
LEEFPYAIRLVAEVLESNGSSSQASICAGTLALMAGGVPIKAPVAGIAMGLISDGNNYTV
LTDIQGLEDHFGDMDFKVAGTRDGITALQMDIKIQGITAEILTEALAQAKKARFEILDVI
EATIPEVRPELAPTAPKIDTIKIDVDKIKIVIGKGGETIDKIIAETGVKIDIDEEGNVSI
YSSDQDAINRAKEIIAGLVREAKVDEVYRAKVVRIEKFGAFVNLFDKTDALVHISEMAWT
RTNRVEDLVEIGDEVDVKVIKIDEKGRIDASMKALLPRPPKPEHDEKGEKSERPHRPRHH
KEHKPKKEFTETPKDSE
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaacaagtgtttcaaacgacttttgcgggtcgtgagttaattgtagagactggt
caggttgctaagcaagcaaatggctctgttgtcgtgcgttacggtgagtcaactgtcttg
actgcggccgttatgtctaagaaaatggcaactggggatttcttccctcttcaagtcaac
tacgaagaaaaaatgtatgcagcagggaagtttcctggtggctttatgaaacgtgaagga
cgtccttcaacggatgcgaccttgacagcgcgtttgattgaccgtccaattcgtcctatg
tttgcggaaggtttccgtaatgaagtacaagtgattaacaccgtgctttcttatgatgaa
aatgcatctgcaccaatggctgctatgtttggttcatccttggcgctgtctatttcagat
attccatttgacggcccaatcgctggggtacaagtgagctatgtagatggtcaaatcatc
atcaaccctacgcaagaacaagcagagcaatctcttcttgaattgacagtagctggaacc
aagcacgctatcaacatggtagagtctggtgccaaagaattgtcagaagaaatcatgttg
gaagcgcttcttaaagggcacgaagctgtcaaagaattgattgccttccaagaagaaatc
gttgctgctgtcggtaaagaaaaagcagaagtggaattgcttcacgtggctgctgaattg
caggcagaaatcatctcagcttacaacagtgacctccaaaaagcggttcaagtagaagaa
aaattggctcgtgaagctgctactcaagcagttaaagaccaagtgactgctgtttatgaa
gaaaaatatgcagaccacgaagaatttgaccgtatcatgcgtgatgtggctgaaatcttg
gaacaaatggaacacgcagaagtgcgacgtttaattacagaagacaaggtgcgtcctgat
ggtcgtaaggtcgatgaaatccgtcctttggatgcggttgttgacttccttcctcgtgtg
cacggctccggtctcttcactcgtggacaaactcaggctctttcagtcttgaccttggct
ccgatgggagaaactcaaatcattgatggtttggatccagagtacaagaaacgctttatg
caccactataactttccacaatactctgtaggggaaacaggtcgttacggtgcgccaggt
cgtcgtgaaatcggtcacggtgctcttggtgagcgtgctcttgctcaagtcttgccaagc
ttggaagaattcccatacgctatccgtctagtagcagaagttttggaatcaaacggttct
tcatctcaagcttctatctgtgcgggaactcttgcccttatggctggtggtgtgccaatc
aaggcgccagtagctggtattgctatgggacttatctcagatggaaataactacacagta
ttgacagatatccaaggtttggaagatcactttggagatatggacttcaaggttgcaggt
actcgtgatgggattacagcccttcaaatggatatcaagattcaagggattactgcagaa
atcttgacggaggctcttgctcaagccaagaaagcgcgttttgaaatccttgatgtcatt
gaagcaaccattccagaagttcgtccagaattggctccaactgctccgaaaattgatacg
atcaagattgatgtggacaagattaagattgtcatcggtaagggtggagaaaccatcgac
aagattatcgctgaaacaggcgttaagattgacatcgacgaagaaggtaacgtatctatc
tactctagcgaccaagatgccatcaatcgtgctaaagaaattattgctggtttggttcgt
gaagctaaggtggacgaagtttaccgtgctaaagtcgttcgtatcgagaaatttggtgcc
tttgttaacctctttgataagacagatgctcttgttcatatctcggagatggcttggact
cgtaccaatcgtgtagaggatttggtagaaatcggggatgaagttgatgttaaggttatc
aagattgatgaaaaaggccgtatcgatgcctctatgaaggctcttctacctcgtccgcca
aaacctgagcatgatgaaaaaggtgaaaagtctgagcgccctcaccgcccacgtcatcac
aaggaacacaaacctaagaaagaatttacagagacaccaaaagattcagagtaa
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