Sporomusa termitida: SPTER_34840
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Entry
SPTER_34840 CDS
T06115
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
sted
Sporomusa termitida
Pathway
sted00541
Biosynthesis of various nucleotide sugars
sted01100
Metabolic pathways
sted01250
Biosynthesis of nucleotide sugars
Module
sted_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
sted00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SPTER_34840 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sted01005
]
SPTER_34840 (kdsA)
Enzymes [BR:
sted01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
SPTER_34840 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
sted01005
]
Lipid A
SPTER_34840 (kdsA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
WHD_DUF6293
DUF5091
Motif
Other DBs
NCBI-ProteinID:
QDR82063
UniProt:
A0A517DXK6
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Position
complement(3632703..3633527)
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AA seq
274 aa
AA seq
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MHTVQIQDITVGTGQPIALLAGPCVIEEPERTLKIGRAIKEIADRLNIPYIFKASYDKAN
RSAYNSFRGPGLKEGLRILAHIKKELGVPVVSDIHCVTQIEAAAEVLDILQIPAFLCRQT
DLVYEAARTGRAINVKKGQFLAPLDMKNVITKIEEAGNRKILLTERGATFGYNNLVVDFR
GLPIMRSLGYPVVFDATHSVQLPGGAGTTSSGQREFVPTLTRAAAAAGIDMLFMEVHDNP
PEGKSDACNMLYVDKLEELLTDVLAIDSVVRKHK
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcatacagtacagattcaagacattaccgtcggcaccgggcagccaattgccctgctt
gccggaccctgtgtcatcgaagagccggaacggaccctgaagattggccgggccatcaag
gaaattgccgaccggctgaacatcccctatatctttaaagcctcctatgataaggccaac
cggtcggcgtataactccttccgcggaccgggcctgaaggaaggcctgcgtatcctggct
catatcaagaaagagctgggcgtgccggtagtcagtgatatccattgtgtaacccagatc
gaagcagcggccgaggtgctggatattctgcagatccctgcttttctctgccggcagaca
gacctggtttacgaggccgcccgcaccggccgggccattaatgtgaaaaaaggccagttt
ctggccccgctggacatgaaaaatgttattaccaagatcgaggaggccggcaatcggaag
atcctgctgaccgagcggggggccacctttggctataacaatctggtggttgatttccgg
gggctgccgattatgcggtccctgggatatccggtggtatttgatgccacccacagtgtg
cagctgcccgggggggcaggcaccacctccagcggccagcgggagtttgttcccacgctg
acaagagccgccgctgctgccggcattgacatgctgtttatggaagtccatgacaacccg
cctgagggtaaatcggacgcctgtaatatgctgtatgtggataaactcgaagaactgtta
acagacgtactggcaatcgacagtgttgtcagaaaacataaatag
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