Stenotrophomonas sp. KCTC 12332: AXG53_13160
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Entry
AXG53_13160 CDS
T04408
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
stek
Stenotrophomonas sp. KCTC 12332
Pathway
stek00190
Oxidative phosphorylation
stek03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stek00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
AXG53_13160
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AXG53_13160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stek03019
]
AXG53_13160
Enzymes [BR:
stek01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
AXG53_13160
Messenger RNA biogenesis [BR:
stek03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AXG53_13160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
AMJ57473
LinkDB
All DBs
Position
3071229..3073316
Genome browser
AA seq
695 aa
AA seq
DB search
MTPPPPPLAPSAVSSDPLRDPSLYINRELSQLDFNFRVLAQAMDEQVPLLERLRFLCISC
TNLDEFFEIRAAAVRHAQEFGLPPAPDGMSPQAILNAIHDRAAELVDQQYRCWNQVLRPA
LGEAGVGILAHKSWTARQRRWLRAYFRNEIMPVLSPLGLDPSHPFPKILNKSLNIVVVLK
GTDAFGRAGHLALVRAPRSLPRIIQLPESLGGPQNFVLLSAVLSAFVDELFPGMDVQGAY
QFRVTRNSELVVDEEEVENLALALRDELVDRGYRPAVRLEIAHDCPKPIMQTLLQNFGLS
ENAAYRIDGPVNLNRVIQVYDLLQRADLKYPPMTPRVFKSPEGIFVTAAQGDVLLHHPFD
SFSTVLEMIREAAIDPNVLAIKQTLYRTGKDSGIVEALILAARNGKDVTVVVELRARFDE
EANLGLADRLQDAGVQVVYGVVGFKTHAKMLLVVRREGRKLRRYVHLGTGNYHSGTARAY
TDLSLITADPDIGNDVHLLFQQLSGLAPKMKLKCLLQSPFTLHAGLIKRIERETALALEG
KPARIIAKMNALNEAQVIRALYAASQAGVQIDLIVRGACTLRPGVEGVSENIRVRSIVGR
FLEHSRVYWFGNNGAPELYCASADWLERNLLRRVETCFPILDSGLARRIYREVLQNYLDD
NLNAWELQEDGRYSKCVPAPGQPPHSAQQALMEGL
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgacccctcctcccccgcccctcgccccgtccgccgtcagcagcgatcccctgcgcgat
ccctcgctgtacatcaaccgggaactgtcacagctggatttcaatttccgcgtgttggca
caggcgatggacgagcaggtgccgctgctggagcgactgcgcttcctgtgcatctcctgc
accaacctggacgagttcttcgagatccgggcggcggcggtgcggcatgcgcaggagttc
gggctgccaccggcgccggacgggatgagcccgcaggccatcctcaacgccatccacgac
cgcgccgccgagctggtggaccagcagtaccgctgctggaaccaggtgctgcggccggcc
ttgggtgaagccggggtcggcatcctcgcgcacaagagctggaccgcgcgccagcgccgc
tggctgcgcgcctacttccgcaacgagatcatgccggtgctgtcgccactgggcctggat
ccctcgcatccgttcccgaagatcctcaacaaatccttgaacatcgtcgttgtgctcaag
ggcaccgacgccttcggccgggccggtcaccttgcgctggtgcgcgcaccgcgctcgttg
ccacgcatcatccagctgcccgaatcgctgggcggcccacagaacttcgtgctgctgtcg
gcagtgttgtcggcgttcgttgatgaactgttcccgggcatggatgtgcagggcgcctac
cagttccgcgtcacccgcaattccgagctggtggtggacgaggaagaagtggagaacctg
gcgctggcactgcgcgatgaactggtcgaccgcggctaccggccggcagtgcgactggag
atcgcgcacgactgccccaagccgatcatgcagaccctgctgcagaatttcggcctgtcc
gaaaacgccgcctaccgcatcgatggcccggtcaacctcaaccgcgtgatccaggtctat
gacctgctgcagcgcgcggacctgaagtacccgccgatgaccccgcgcgtgttcaagtcg
cccgagggtattttcgtgacggcggcgcagggcgatgtgctgctgcaccacccgtttgat
tccttcagcaccgtgctggagatgatccgcgaagcggccatcgaccccaacgtgctggcg
atcaagcagaccctgtaccgcaccggcaaggactcgggcattgttgaagcgctgatcctg
gccgcgcgcaacggcaaggacgtgaccgtggtggtcgagctgcgtgcgcgcttcgacgag
gaagccaacctcggcctggccgatcgcctgcaggatgccggcgtgcaggtggtgtacggc
gtggtcggtttcaagacccacgccaagatgctgctggtcgtgcgccgcgaaggccgcaaa
ctgcgccgctacgtgcacctgggcaccggcaattaccacagcggcaccgcccgtgcctac
accgacctgagcctgatcaccgccgatccggatatcggcaacgatgtgcacctgctgttc
cagcagctgtccgggcttgccccgaaaatgaagctcaagtgcctgctgcaatcgccgttc
accctgcatgccgggctgatcaagcgcatcgagcgcgagaccgcgcttgccctggaaggc
aagccggcacgcatcatcgccaagatgaacgccctcaacgaggcgcaggtgatccgcgcc
ctgtacgcggcctcgcaggccggcgtgcagatcgacctgatcgtgcgtggcgcctgcacc
ctgcgcccgggtgtggagggcgtatcggagaacatccgcgtccgctctatcgtcgggcgc
ttccttgaacacagccgcgtgtactggttcggcaacaatggcgcgcccgagctgtattgc
gccagcgccgattggctggaacgcaacctgctgcgccgcgtggaaacctgcttcccgatc
ctggacagtgggctggcccggcgtatctaccgcgaggtgctgcagaactacctggacgac
aacctcaacgcctgggagctgcaggaagacggccgctacagcaaatgcgtgccggccccg
ggccagccaccgcattcggcgcagcaggcgctgatggaagggctttga
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