KEGG   Stenotrophomonas sp. MYb57: CLM74_19220
Entry
CLM74_19220       CDS       T05384                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
stem  Stenotrophomonas sp. MYb57
Pathway
stem03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:stem00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CLM74_19220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:stem03400]
    CLM74_19220
Enzymes [BR:stem01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     CLM74_19220
DNA repair and recombination proteins [BR:stem03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CLM74_19220
 Prokaryotic type
     CLM74_19220
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AVJ34769
LinkDB
Position
complement(4223775..4224500)
AA seq 241 aa
MIDEVVDTPAIQLEPSWKQRVGDYLLQPQMRELSSFLRQRKASGAAVFPPGPQIFAAFDA
TPFDQVKVVILGQDPYHGRGQAHGLSFSVQPGVPVPPSLLNIYKEIEGDLGIARPDHGCL
IPWAQRGVLLLNAVLTVEEGKAGAHQGRGWEGFTDHVVDVLNREREGLVFMLWGAYAQQK
GKVIDTGRHRVLKAPHPSPLSAHRGFLGCRHFSMANEYLQRRGQAPIDWSLPPRAILAPS
G
NT seq 726 nt   +upstreamnt  +downstreamnt
atgatcgatgaagtagtggacaccccggcgatccagctggaaccgagctggaaacagcgt
gtgggcgattacctgctgcagccgcagatgcgcgagctgtccagcttcctgcggcagcgc
aaggccagcggtgcggcggtgttcccgcctggaccgcagatcttcgccgcctttgatgcg
accccgttcgatcaggtgaaagtggtcatcctcggccaggacccgtaccacggccgtgga
caggcccatggcctgagtttctcggtgcagccgggcgtgccggtgccgccgtcgttgttg
aacatctacaaggaaatcgagggtgacctcggtattgcccgcccggaccacggctgcctg
atcccgtgggcgcagcgcggcgtgctgctgctcaacgcggtgctgacggtggaagagggc
aaggccggtgcgcaccaggggcgcggatgggaaggcttcaccgaccacgtggtggacgtg
ttgaaccgtgagcgcgagggcctggtgttcatgctctggggtgcctacgcgcagcagaag
ggcaaggtgatcgataccggccgccaccgcgtgctgaaagccccgcatccctcgccgctg
tcggcccaccgcggcttcctcggctgccgtcatttctcgatggccaacgagtacctgcaa
cgccgcgggcaggcgccgatcgactggtcgctgccgccgcgggcgatcctggcgccatcg
ggctga

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