Stenotrophomonas sp. Pemsol: PEM_01390
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Entry
PEM_01390 CDS
T10809
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
steo Stenotrophomonas sp. Pemsol
Pathway
steo00260
Glycine, serine and threonine metabolism
steo00460
Cyanoamino acid metabolism
steo00630
Glyoxylate and dicarboxylate metabolism
steo00670
One carbon pool by folate
steo00680
Methane metabolism
steo01100
Metabolic pathways
steo01110
Biosynthesis of secondary metabolites
steo01120
Microbial metabolism in diverse environments
steo01200
Carbon metabolism
steo01230
Biosynthesis of amino acids
steo01240
Biosynthesis of cofactors
steo04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
steo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PEM_01390 (glyA)
09102 Energy metabolism
00680 Methane metabolism
PEM_01390 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PEM_01390 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PEM_01390 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PEM_01390 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PEM_01390 (glyA)
Enzymes [BR:
steo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PEM_01390 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Glyco_hydro_92
Motif
Other DBs
NCBI-ProteinID:
AYA89484
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Position
316378..317631
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AA seq
417 aa
AA seq
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MFPRDVRIETYDPELAKAIAAETQRQEDHVELIASENYTSPAVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDIAEQLAIDRLKQLFGADYANVQPHSGSQANQAVYFALLQPGDTILGMS
LAHGGHLTHGAKVNASGKLFNAVQYGVNDQGLIDYDEVERLALEHKPKMVVAGFSAYSQV
IDWARFRAIADKVGAYLFVDMAHVAGLVAAGVYPSPLEHAHVVTSTTHKTLRGPRGGIII
AKGADEDLVKKLQSIVFPGIQGGPLMHVIAGKAVAFKEALEPGFKAYQQQVVKNAQAMAN
TLISRGYKIVSGGTQNHLMLVDMIGKDVSGKDAEAALGKAHITVNKNSVPNDPRSPFVTS
GLRLGTPAVTTRGYVEQDCVDLANWIADVLDAPNDDAVIARVRDAVSAQCRKYPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcccgcgtgacgtccgcatcgaaacctacgatcccgaactggccaaggccattgcc
gctgagacccagcgccaggaagaccacgtcgagctgatcgccagcgagaactacaccagc
ccggcggtgatggaagcccagggcagccagctgaccaacaagtacgccgaaggctacccg
ggcaagcgctactacggtggctgcgaatacgtggacatcgccgagcagctggcgatcgac
cgcctcaagcagctgttcggtgcggactacgccaacgtgcagccgcacagcggctcgcag
gccaaccaggccgtgtacttcgccctgctgcagccgggtgacaccatcctcggcatgagc
ctggcccacggcggccacctcacccacggtgccaaggtcaatgcctcgggcaagctgttc
aacgccgtgcagtacggcgtcaacgaccagggcctgatcgattacgacgaagtcgagcgc
ctggccctggagcacaagccgaagatggtcgtcgccggcttctcggcgtactcgcaggtg
atcgactgggcgcgcttccgcgccatcgccgacaaggtcggtgcctacctgttcgtggac
atggcccacgtggccggcctggtcgccgctggcgtctacccgagcccgctggagcatgcc
cacgtcgttacctccaccacccacaagaccctgcgcggcccgcgtggcggcatcatcatc
gccaagggcgccgacgaagacctggtcaagaagctgcagtcgatcgtgttcccgggcatc
cagggcggtccgctgatgcacgtcatcgccggcaaggccgtggccttcaaggaagcgctg
gaaccgggcttcaaggcctaccagcagcaggtggtgaagaacgcccaggcgatggccaac
acgctgatctcgcgcggctacaagatcgtttccggtggcacccagaaccacctgatgctg
gtcgacatgatcggcaaggacgtgtccggcaaggatgcggaagctgcgctgggcaaggct
cacatcaccgtcaacaagaactcggtgccgaacgatccgcgttctccgttcgtgacctcg
ggcctgcgcctgggcaccccggccgtgaccacccgtggctacgtcgagcaggactgcgtg
gacctggccaactggatcgccgacgtgctggacgcgccgaacgatgatgccgtcatcgcc
cgcgtgcgtgatgccgtcagcgcgcagtgccgcaagtacccggtttacggctga
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