KEGG   Stenotrophomonas sp. Pemsol: PEM_01390
Entry
PEM_01390         CDS       T10809                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
steo  Stenotrophomonas sp. Pemsol
Pathway
steo00260  Glycine, serine and threonine metabolism
steo00460  Cyanoamino acid metabolism
steo00630  Glyoxylate and dicarboxylate metabolism
steo00670  One carbon pool by folate
steo00680  Methane metabolism
steo01100  Metabolic pathways
steo01110  Biosynthesis of secondary metabolites
steo01120  Microbial metabolism in diverse environments
steo01200  Carbon metabolism
steo01230  Biosynthesis of amino acids
steo01240  Biosynthesis of cofactors
steo04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:steo00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    PEM_01390 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    PEM_01390 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PEM_01390 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    PEM_01390 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    PEM_01390 (glyA)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    PEM_01390 (glyA)
Enzymes [BR:steo01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     PEM_01390 (glyA)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase Aminotran_5 DegT_DnrJ_EryC1 Glyco_hydro_92
Other DBs
NCBI-ProteinID: AYA89484
LinkDB
Position
316378..317631
AA seq 417 aa
MFPRDVRIETYDPELAKAIAAETQRQEDHVELIASENYTSPAVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDIAEQLAIDRLKQLFGADYANVQPHSGSQANQAVYFALLQPGDTILGMS
LAHGGHLTHGAKVNASGKLFNAVQYGVNDQGLIDYDEVERLALEHKPKMVVAGFSAYSQV
IDWARFRAIADKVGAYLFVDMAHVAGLVAAGVYPSPLEHAHVVTSTTHKTLRGPRGGIII
AKGADEDLVKKLQSIVFPGIQGGPLMHVIAGKAVAFKEALEPGFKAYQQQVVKNAQAMAN
TLISRGYKIVSGGTQNHLMLVDMIGKDVSGKDAEAALGKAHITVNKNSVPNDPRSPFVTS
GLRLGTPAVTTRGYVEQDCVDLANWIADVLDAPNDDAVIARVRDAVSAQCRKYPVYG
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgttcccgcgtgacgtccgcatcgaaacctacgatcccgaactggccaaggccattgcc
gctgagacccagcgccaggaagaccacgtcgagctgatcgccagcgagaactacaccagc
ccggcggtgatggaagcccagggcagccagctgaccaacaagtacgccgaaggctacccg
ggcaagcgctactacggtggctgcgaatacgtggacatcgccgagcagctggcgatcgac
cgcctcaagcagctgttcggtgcggactacgccaacgtgcagccgcacagcggctcgcag
gccaaccaggccgtgtacttcgccctgctgcagccgggtgacaccatcctcggcatgagc
ctggcccacggcggccacctcacccacggtgccaaggtcaatgcctcgggcaagctgttc
aacgccgtgcagtacggcgtcaacgaccagggcctgatcgattacgacgaagtcgagcgc
ctggccctggagcacaagccgaagatggtcgtcgccggcttctcggcgtactcgcaggtg
atcgactgggcgcgcttccgcgccatcgccgacaaggtcggtgcctacctgttcgtggac
atggcccacgtggccggcctggtcgccgctggcgtctacccgagcccgctggagcatgcc
cacgtcgttacctccaccacccacaagaccctgcgcggcccgcgtggcggcatcatcatc
gccaagggcgccgacgaagacctggtcaagaagctgcagtcgatcgtgttcccgggcatc
cagggcggtccgctgatgcacgtcatcgccggcaaggccgtggccttcaaggaagcgctg
gaaccgggcttcaaggcctaccagcagcaggtggtgaagaacgcccaggcgatggccaac
acgctgatctcgcgcggctacaagatcgtttccggtggcacccagaaccacctgatgctg
gtcgacatgatcggcaaggacgtgtccggcaaggatgcggaagctgcgctgggcaaggct
cacatcaccgtcaacaagaactcggtgccgaacgatccgcgttctccgttcgtgacctcg
ggcctgcgcctgggcaccccggccgtgaccacccgtggctacgtcgagcaggactgcgtg
gacctggccaactggatcgccgacgtgctggacgcgccgaacgatgatgccgtcatcgcc
cgcgtgcgtgatgccgtcagcgcgcagtgccgcaagtacccggtttacggctga

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