Stenotrophomonas sp. 169: ICJ04_05490
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Entry
ICJ04_05490 CDS
T08645
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
steq
Stenotrophomonas sp. 169
Pathway
steq00040
Pentose and glucuronate interconversions
steq01100
Metabolic pathways
steq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
steq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
ICJ04_05490
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ICJ04_05490
Enzymes [BR:
steq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
ICJ04_05490
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
QNR99044
LinkDB
All DBs
Position
complement(1284352..1285467)
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AA seq
371 aa
AA seq
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MVAFVVAASLSWPHSAAAQPDRSREIATSGWATQDGGTRGGSNAAASAVFTVNNAATLRS
ALKAEVGDTGRIIRINGVIDLSEGMPYTSSADMKARARVEVPAKTTIVGIASDAEFREAY
LIIKADDVIIRNLTIENPWDPVPVWDPNDGNAGNWNSEFDGITIDGAKNVWVDHVTFTDG
RRTDDQNGSENGRPKQHHDGALDIKNGANYVTVSYSAFRLHEKNSLIGASDAASSKDSGK
LKVTIHNTLFENIGSRGPRVRFGQVHLYNNYHVGSASHPVYPFAYAHGVGKESKILAEAN
VYQLDGISSCDKVAVNYGGTVYRDDGSMLNGTSLECSWNRNIGWTPPYPYLPLNAGEVAA
DVLGKAGAGKL
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggttgccttcgtcgtagcggcatcactctcttggccgcacagtgcagcagcgcagcct
gatcgaagtcgcgagatagccaccagtggctgggcgacccaggacggcggcacccgcggt
ggttccaacgcagcagcgagcgctgtttttaccgtcaacaacgcggccacactccgaagc
gcactcaaggccgaggtgggtgacaccgggcggatcatccgcatcaacggtgtgatcgac
ctcagcgaagggatgccatacaccagctcggccgatatgaaggcgcgggcaagggtcgag
gtgccggccaagaccacgattgtcggcatcgcgtctgatgctgagttccgagaggcctat
ttaatcatcaaggcagatgacgtcatcatccggaatctcacgatcgagaatccatgggac
ccagtgcccgtttgggaccccaatgacgggaacgcaggcaattggaactctgagttcgac
ggcatcacgatagatggcgccaagaatgtgtgggtggaccacgtgacgttcacagacggg
cgtcgtaccgatgatcagaatggcagtgagaatgggcggcccaagcagcaccacgatggt
gcactggacataaagaacggcgcgaactacgtgaccgtgtcctactcggcgtttcgcttg
cacgaaaagaacagcctgattggcgccagcgacgcagcgtcatccaaagatagcggcaag
ctcaaagtcaccatccacaacacgttgttcgagaacatcggttcgcgcggacctcgggtt
cgattcggccaggtacacctgtacaacaattatcatgtcgggagcgcgagtcacccggtg
tatcccttcgcgtacgcgcatggcgttggcaaagagtcaaagattctcgctgaagccaat
gtgtaccaactcgacggcataagcagctgcgataaggtcgcggtcaattatggcggaacc
gtctaccgcgatgacggatcgatgctcaacggaacctcactggagtgcagctggaaccgc
aatatcggctggactccgccttacccttacttgccattgaatgccggcgaggttgctgcc
gatgtgctggggaaagccggggcggggaagctttga
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