Streptomyces sp. Go40/10: KBP30_21605
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Entry
KBP30_21605 CDS
T11184
Name
(GenBank) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
stgo Streptomyces sp. Go40/10
Pathway
stgo00040
Pentose and glucuronate interconversions
stgo01100
Metabolic pathways
stgo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
stgo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
KBP30_21605
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KBP30_21605
Enzymes [BR:
stgo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
KBP30_21605
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Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
UFR07446
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Position
5068820..5070064
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AA seq
414 aa
AA seq
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MHANADAVDLYHQTLAAKDGWAASGTGTTGGAKADSAHTFTVSTRAQLVKALGSASDTTP
RIIKVKGTIDANTDDSGKKLTCADYASGTGYALSAYLKAYDPATYGRSKLPSGTQEKARA
AAQARQAKNIVFKVPANTSIVGVPGTNAGITGGMLQIQHVDNVIVRNLAFSATEDCFPQW
DPTDGDDGNWNSDYDSVTLRGATHVWADHNTFTDAPHFDKANPKYFGREYQIHDGALDIT
KGSDLVTVERNRFTDHDKTMLIGSSDTDSTGKLRVSLHHNVWKGIVQRAPLTRIGQVHIY
NNLYDTTTADGYAPLYSINSRAKAQVVAQANYWTVPSGGKVAKLLSGDGTGSVAGNGNLV
NGTVTDLVAAYNAASSKKIQTTVNWTPTLTAGLETSAKNLPAELADTTGAGVLK
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcgaacgccgacgccgtcgacctgtaccaccagaccctcgccgccaaggacggc
tgggccgcctccggcacggggaccaccggcggggcgaaggccgactccgcgcacaccttc
accgtctccacccgggcccagctggtgaaggcgctgggttcggcgtcggacaccacgccc
cggatcatcaaggtcaagggcacgatcgacgccaacaccgacgacagcggcaagaagctg
acgtgcgccgactacgcctccggcaccggatacgcgctgtcggcctacctcaaggcctac
gaccccgccacctacggccgctccaagctgccctccggcacccaggagaaggcacgcgcc
gccgcccaggccaggcaggcgaagaacatcgtcttcaaggtgccggccaacacctcgatc
gtgggcgtgcccggcaccaacgccgggatcaccggcggcatgctccagatccagcacgtg
gacaacgtcatcgtccgcaacctggccttctccgccaccgaggactgcttcccgcagtgg
gaccccaccgacggcgacgacggcaactggaactcggactacgactcggtcaccctgcgc
ggcgcgacccacgtctgggcggaccacaacacgttcaccgacgcgccccacttcgacaag
gcgaacccgaagtacttcggccgcgagtaccagatccacgacggcgccctggacatcacc
aagggctccgacctggtgaccgtcgagcggaaccggttcaccgaccacgacaagacgatg
ctgatcggctccagcgacaccgacagcaccggcaagctccgggtctccctccaccacaac
gtgtggaagggcatcgtccagcgggccccgctgacccgcatcggccaggtccacatctac
aacaacctgtacgacacgacgaccgccgacggctacgcgcccctgtacagcatcaactcc
cgcgccaaggcccaggtcgtcgcgcaggccaactactggacggtgccctccggcggcaag
gtggccaagctgctcagcggtgacggcaccggctccgtcgcgggcaacggcaacctggtc
aacggcacggtcaccgacctggtcgccgcgtacaacgccgcgagctcgaagaagatccag
acgaccgtgaactggacgccgacgctcaccgcgggcctggagacctcggcgaagaacctg
ccggcggagctggcggacacgaccggcgcgggcgtgctcaagtag
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