Sphingobacterium thalpophilum: NCTC11429_03912
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Entry
NCTC11429_03912 CDS
T06778
Symbol
mutS_3
Name
(GenBank) DNA mismatch repair protein mutS
KO
K03555
DNA mismatch repair protein MutS
Organism
stha
Sphingobacterium thalpophilum
Pathway
stha03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NCTC11429_03912 (mutS_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stha03400
]
NCTC11429_03912 (mutS_3)
DNA repair and recombination proteins [BR:
stha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
NCTC11429_03912 (mutS_3)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
AAA_27
AAA_14
AAA_23
Motif
Other DBs
NCBI-ProteinID:
VTR49561
UniProt:
A0A4U9VZP4
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Position
1:complement(4502376..4503725)
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AA seq
449 aa
AA seq
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MSFIIDKQTLQDLNISGKYKRDSIFSLYNKTETFGGEQLLEKLFEQPLADSEAIRRRSTL
ISFFRRLPRRFQIRPEDLDIAQSYTNSYSGRGLTVALLRAARRQLLAVLGLKEEKKHTES
GIRATFRIMLELASYLSLLREHDTDGLLQDSVFEQSWLRSEHSLLLQLQQQIDSHTDTLP
LVLAARCDYQLRYRWAREIQQSLSAIYHIDLYQSIAEVANQRHFVQAEVLPPDQQAIELH
DVYHPAIPDAVGNDLQFKGSHNLIFLTGANMAGKSTYMKSFGIAIYLAHLGLPVAAAKMR
FSVKDGLYSSINVADNIDLGHSHYYAEVLRVKKVATYVSQGKNMVIIFDELFKGTNVKDA
FEATLTVTRAFQQHHNCQYLISTHIVEVGEQLQQDNSNIQFVYMPTTMRGQVPYYSYRSA
NGISSDKHGMVLIHKEKVLELLEQNSKNI
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcatcattgataaacagacccttcaagatctcaatatttccggaaaatataaa
cgggactcaatcttttccctttacaataagaccgagactttcggcggggagcagctgctg
gaaaaactatttgagcaacccctcgccgacagcgaagcgatccggcggcggagcacactc
atttccttctttcggaggctaccccgccggttccaaatccgtccggaggacctcgatatc
gcccagagctataccaacagttactccggccgcggtttgactgtcgccctgctccgcgct
gcccgtcggcagctgctcgccgtgctcgggctgaaagaagaaaaaaaacatactgagtca
ggcatccgcgcaacattccggatcatgcttgagctcgccagctacctttcactcctgcgg
gagcacgatacagatggtctgcttcaggacagcgtcttcgagcagtcatggttgcgcagc
gaacacagcctgctgctgcagctacagcagcagattgactcacatacggatacattacca
cttgttctcgctgcacgttgtgactatcagctgcgctacagatgggccagggaaattcag
cagagtctttccgctatctatcatattgatctgtatcagtccattgccgaggtcgccaac
cagcgtcattttgtacaggcagaggtcctgcccccagatcagcaggcgattgaactgcac
gacgtataccaccccgccatccccgatgccgtgggcaatgatctgcaatttaagggcagc
cacaacctgatctttctgaccggagccaatatggcaggcaaatccacctatatgaagagc
tttggcatcgcgatctaccttgcccatctcggcctgcccgtggcggcagctaaaatgcgc
ttctcggtgaaagacgggttatatagctccatcaatgttgccgacaacatcgatctgggc
cacagccattactacgccgaggtactccgtgtcaaaaaggtcgcgacctatgtcagtcag
ggcaaaaatatggtcatcatttttgatgagctcttcaagggcaccaacgtcaaagatgcc
tttgaagcaacgctcacggtgacacgcgcatttcagcagcatcacaactgccagtatctg
atttcgacccatattgttgaggtgggcgagcagctgcagcaggacaacagcaacatacaa
tttgtctatatgcccacaacgatgcgcggacaagttccttattacagctaccgttcagct
aacggaatcagtagcgataagcatggtatggtactcatccacaaagaaaaagtactcgaa
ttattagaacaaaacagcaaaaacatataa
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