Caldimonas thermodepolymerans: IS481_01315
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Entry
IS481_01315 CDS
T06911
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
sthm
Caldimonas thermodepolymerans
Pathway
sthm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IS481_01315 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sthm03400
]
IS481_01315 (xth)
Enzymes [BR:
sthm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
IS481_01315 (xth)
DNA repair and recombination proteins [BR:
sthm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
IS481_01315 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
QPC31856
LinkDB
All DBs
Position
complement(264545..265336)
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AA seq
263 aa
AA seq
DB search
MTRIITVNLNGIRSAVNKGFLPWLEKQTADFVCVQEIKAHEGDITPAMRTVDGFKSHFHC
AQKKGYSGVGLYLKSEPSDLVVGFDGGEFDSEGRYLEARYDRPGRKLSVISCYFPSGSSG
EERQQAKYRFLDAFFPHLQRLKAEREFVLCGDLNIAHQEIDLKNWKSNQKNSGFLPEERA
WFTRMLDEIGLVDVYRRLHPDHTGEAYTWWSNRGQAWAKNVGWRIDYHIATPALAETARS
AAVYKDERFSDHAPLTVDYGFSV
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcatcatcaccgtcaacctcaacggcatccggtccgccgtcaacaaggggttc
ctcccctggctcgagaagcagaccgccgacttcgtctgcgtgcaggaaatcaaggcccac
gaaggcgacatcaccccggcgatgcgcaccgtggacggcttcaagtcccatttccattgc
gcgcagaagaagggctattccggcgtcggcctgtacctgaagagcgagccgagcgacctg
gtcgtcggcttcgacggcggcgagttcgacagcgaaggccgctacctcgaggcccgctac
gaccggccgggccgcaagctgtcggtgatcagctgctacttcccgagcggctccagcggc
gaggagcgccagcaggccaagtaccgcttcctcgacgcgttcttcccgcacctgcagcgg
ctcaaggccgagcgggagttcgtcctgtgcggcgacctgaacatcgcccaccaggaaatc
gacctcaagaactggaagagcaaccagaagaacagcggcttcctgcccgaggaacgcgcc
tggttcacgcgcatgctcgacgagatcgggctggtggacgtgtaccgccgcctgcacccg
gaccacaccggcgaggcctacacgtggtggagcaaccgcggccaggcctgggccaagaac
gtggggtggcgcatcgactaccacatcgccacgcccgcgctggccgaaacggcccgctcg
gcggccgtctacaaggacgagcgcttctccgaccacgcgccgctgaccgtcgactacggc
ttttcggtctga
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integrated database retrieval system