Streptomyces sp. ICC4: DRB89_38445
Help
Entry
DRB89_38445 CDS
T10587
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
stic Streptomyces sp. ICC4
Brite
KEGG Orthology (KO) [BR:
stic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
stic03051
]
DRB89_38445 (pafA)
Enzymes [BR:
stic01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
DRB89_38445 (pafA)
Proteasome [BR:
stic03051
]
Prokaryotic proteasome
Bacterial regulatory particles
DRB89_38445 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Ribosomal_L19
Motif
Other DBs
NCBI-ProteinID:
AWZ09377
LinkDB
All DBs
Position
complement(8184349..8185710)
Genome browser
AA seq
453 aa
AA seq
DB search
MDRRIFGLENEYGVTCTFRGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDNLIELVTHDKAGERILEGLLVDAERRLHEEGIAGDVYLFKNNTDSAGNSY
GCHENYLVARHGEFSRLADILIPFLVTRQLICGAGKVLQTPRGAVYCVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMSETTMLLKVGATDLVLRMIEAGTVM
RDLTLENPIRAIREVSHDITGQRKVRLASGREASALEIQREYYDKAVDFAERRGIRTGVV
DQVLELWGRTLDAIDAEDLDRIGTEIDWVMKYQLIERYRAKHNMTMSNPRVAQIDLAYHD
IHRRRGLYYLLERKGQAARICNDLKIFEGKSVPPQTTRARLRGDFIRRAQEQRRDFTVDW
VHLKLNDQAQRTVLCKDPFRSVDDRVEKLIAGM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaccgccgcattttcgggctggagaacgagtacggcgtcacgtgcacgttcagggga
cagcgccgactgtctcctgacgaagtggcgcgctacctcttccgccgtgttgtgtcatgg
ggccgcagtagcaatgtcttcctgcggaacggcgcccgcctctacctcgacgtcggttcg
catccggagtacgcaactcccgaatgcgacaacctgatcgaactggtcacccacgacaag
gccggcgagcgcattctcgaaggcctgctcgtcgatgccgaacgccgtctgcacgaggag
ggaatcgcgggagacgtctatctgttcaagaacaacaccgactcggcgggcaactcgtac
ggctgccacgagaactatctggtggcgcggcacggggaattctcgcggctcgcggacatt
ctcatcccgttcctcgtcacgcggcagctgatctgcggtgcgggcaaggtgctgcagacg
ccgaggggcgcggtctactgcgtcagccagcgggcggagcacatctgggagggcgtcagc
tcggccacgacgcgttcgcggccgatcatcaacacgcgcgacgagccgcacgcggacgcg
gagcgctaccggcgcctgcacgtcatcgtgggcgactcgaacatgtccgagacgaccatg
ctgctgaaggtcggggcgaccgatctggtgctgcgcatgatcgaggcgggcacggtgatg
cgggacctgacgctggagaacccgatccgggcgatccgcgaggtcagccacgacatcacg
ggtcagcgcaaggtgcgtctggcgagcggccgggaggcctcggcgctggagatccagcgg
gagtactacgacaaggcggtggacttcgccgagcggcgggggatccgcacgggtgtcgtg
gaccaggtgctggagctgtggggccgcacgctcgacgcgatcgacgcggaggacctggac
cggatcgggaccgagatcgactgggtcatgaagtaccagctgatcgagcggtaccgggcc
aagcacaacatgacgatgtcgaatccgcgggtggctcagatagacctcgcctaccacgac
atccaccgcaggcgcgggctgtactacctgctggagcgcaaggggcaggcggcgcggatc
tgcaacgacctcaagatcttcgaggggaagtcggttcctccgcagacgacgagggcgcgg
ctgcggggcgacttcatccgccgggcgcaggagcagcggcgggacttcacggtcgactgg
gtgcatctgaagctcaatgaccaggcgcagcgcaccgtgctgtgcaaggacccgttccgt
tcggtggacgaccgggtggagaagctgatcgcggggatgtag
DBGET
integrated database retrieval system
