Streptomyces tirandamycinicus: DDW44_13645
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Entry
DDW44_13645 CDS
T06843
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
stir
Streptomyces tirandamycinicus
Pathway
stir03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
stir00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DDW44_13645
09124 Replication and repair
03420 Nucleotide excision repair
DDW44_13645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stir03021
]
DDW44_13645
03400 DNA repair and recombination proteins [BR:
stir03400
]
DDW44_13645
Enzymes [BR:
stir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DDW44_13645
Transcription machinery [BR:
stir03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
DDW44_13645
DNA repair and recombination proteins [BR:
stir03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
DDW44_13645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
ETAA1
IMD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AWI29718
UniProt:
A0A2S1STL1
LinkDB
All DBs
Position
3101038..3102681
Genome browser
AA seq
547 aa
AA seq
DB search
MNGPLIVQSDKTLLLEVDHDLADACRRAIAPFAELERAPEHIHTYRVTPLGLWNARAAGH
DAEQVVDALVEFSRYPVPHALLVDVAETMARYGRLTLVKHPTHGLVLSTTDRPVLEEVLR
SKRIQPLVGPRIDPDTVAVHPSERGQIKQTLLKLGWPAEDHAGYVDGEAHRIDLDESGWA
LRPYQKQAVEGFWHGGSGVVVLPCGAGKTLVGAGAMAQAKATTLILVTNTVSARQWKHEL
VKRTSLTEEEIGEYSGAKKEIRPVTIATYQVLTTRRKGVYPHLELFDSRDWGLIVYDEVH
LLPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYIAPA
DCVEVRVNLTDSERLAYATAETEEKYRFCATTDTKRKVAEALVRRHAGQQTLVIGQYIDQ
LDELGEHLDAPVIKGETPNSQREKLFDAFRNGEISVLVVSKVANFSIDLPEATIAIQVSG
TFGSRQEEAQRLGRVLRPKADGHKAHFYSVVARDTIDQDFAAHRQRFLAEQGYAYRIVDA
DDLAAEG
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgggccgcttatcgtccaaagcgacaagactcttctgctcgaggtcgaccacgac
ctggccgacgcgtgccgccgcgccatcgcccccttcgccgagctggagcgcgcccccgag
cacattcacacctaccgtgtcaccccgctcggactgtggaacgcacgggcggccgggcac
gacgccgagcaggtcgtggacgcgctcgtcgagttctcccgctaccccgtcccgcacgcg
ctgctggtcgacgtggccgagacgatggcccggtacggtcgtctcacgctggtcaagcac
cccacccacggcctggtgctgtccacgaccgaccgccccgtgctggaggaggtcctgcgc
tccaagaggatccagccgctggtcggcccaaggatcgacccggacacggtcgccgtgcac
ccctccgagcgcggccagatcaagcagacgctgctgaagctcggctggcccgccgaggac
cacgccggctacgtcgacggggaggcccaccgcatcgacctggacgagtccggctgggcc
ctgcgcccgtaccagaagcaggcggtcgagggcttctggcacggtggctcgggtgtcgtg
gtgctcccctgcggcgcgggcaagacgctggtcggcgccggggcgatggcccaggcgaag
gcgaccacgctcatcctcgtcaccaacacggtctccgcccgccagtggaagcacgagctc
gtgaagcgcacctcgctgaccgaggaggagatcggcgagtacagcggcgcgaagaaggag
atccgaccggtcaccatcgccacgtaccaggtgctcacgaccaggcggaagggtgtctac
ccgcacctggagctgttcgactcccgcgactgggggctgatcgtctacgacgaggtgcac
ctcctgcccgcaccggtcttcaagttcaccgcggacctgcaggcccgccggcggctcggc
ctgacggcgacgctcgtgcgcgaggacggccgcgagtcggacgtcttctcgctcatcggc
cccaagcggttcgacgcgccctggaaggagatcgaggcgcaggggtacatcgcgcccgcg
gactgcgtcgaggtccgggtcaatctgacggactccgagcggctcgcgtacgcgacggcg
gagaccgaggagaagtaccgcttctgcgccaccacggacaccaagcggaaggtcgcggag
gcgctcgtgcgcaggcacgcgggccagcagaccctggtcatcggccagtacatcgaccag
ctcgacgaactcggcgagcacctggacgcgcccgtcatcaagggcgagacgcccaactcc
cagcgggagaagctcttcgacgcgttccggaacggcgagatctcggtcctggtcgtctcc
aaggtcgcgaacttctcgatcgacctgccggaggcgacgatcgccatccaggtgtcgggc
accttcggctcccgccaggaggaggcccagcgcctcggccgcgtgctgcgcccgaaggcg
gacggccacaaggcgcacttctactcggtggtggcccgcgacacgatcgaccaggacttc
gcggcgcaccgccagcgcttcctcgcggagcaggggtacgcgtaccggatcgtggacgcg
gacgacctggccgccgagggctga
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