Streptococcus thermophilus ND03: STND_1428
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Entry
STND_1428 CDS
T01978
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
stn
Streptococcus thermophilus ND03
Pathway
stn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
stn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
STND_1428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stn03400
]
STND_1428
DNA repair and recombination proteins [BR:
stn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
STND_1428
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
STND_1428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
T2SSE
AAA_5
AAA_7
AAA_19
AAA_14
AAA_16
AAA_22
HEM4
Microtub_bd
AAA
Motif
Other DBs
NCBI-ProteinID:
ADQ63467
LinkDB
All DBs
Position
complement(1349932..1351923)
Genome browser
AA seq
663 aa
AA seq
DB search
MIDRKEDNQFHLVSKYEPSGDQPQAIETLVDNIKGGEKAQILKGATGTGKTYTMSQVIQR
VNKPTLVIAHNKTLAGQLYGEFKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTYIEKDSSI
NDEIDKLRHSATSALLERNDVIVVASVSCIYGLGSPKEYADSAVSLRPGQEISRDKLLND
LVDIQFERNDIDFQRGKFRVRGDVVEIFPASRDENAFRVEFFGDEIDRICEIESLTGRNL
GEVEHLVLFPATHFMTNEEHMEEAIKNIMEEMEVQVNQFEAEGKLIEAQRIRQRTEYDVE
MLREMGYTNGIENYSRHMDGRKEGEPPFTLLDFFPEDFLIMIDESHMTMGQIKGMYNGDQ
ARKKMLVDYGFRLPSALDNRPLRREEFESHVHQIVYVSATPGDYEMEQTETVVEQIIRPT
GLLDPEVEVRPTMGQMDDLLGEINARTEKGERVFVTTLTKKMAEDLTDYLKEMGVKVKYM
HSDIKTLERTEIIRDLRLGVFDVLIGINLLREGIDVPEVSLVAILDADKEGFLRNERGLI
QTIGRAARNSDGHVIMYADKITESMQKAMDETARRREIQMAYNKEHGITPQTIKKEIRDL
ISITKTNEAEVAEDTVNYCAMNKKERQEAIKKLQKQMHEAAELLDFELAAQIRDMVLELK
SMD
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgatagatagaaaagaagacaaccaatttcatttggtttctaaatacgaaccctcagga
gatcagccccaggctatcgaaaccttggttgataatatcaaaggtggggagaaggctcaa
attttaaagggtgcgacagggacaggtaagacctataccatgagtcaagtcatccaacgt
gttaataagccaactctggttatcgcccacaataagaccttggcaggccagctctatggt
gagttcaaggagtttttcccagacaatgctgtagagtattttgtttcctattatgattat
taccagccagaggcttatgtgccttcatcagatacctatattgaaaaagatagctctatt
aatgatgaaattgataaactccgtcactcagcgacatcagccctattggaacgcaatgat
gtaattgttgtggcttccgtgtcttgtatttacggtttgggttcgccaaaagaatatgcg
gattcagctgttagcctgcgtcctggtcaagaaatttctcgggacaagttgctcaatgac
ttggttgatatccagtttgagcgtaacgatattgattttcaacgcggaaaattccgtgta
cgtggcgatgtggttgaaattttccctgccagccgtgatgaaaatgcttttcgagtggaa
tttttcggtgatgagattgaccgtatctgtgaaattgaaagtttgacaggacgtaatctc
ggtgaagttgagcaccttgttctttttccggctactcactttatgaccaatgaagagcat
atggaagaagctatcaagaatattatggaagagatggaggttcaggttaatcaatttgaa
gccgagggtaaactcatcgaggctcaacgtattcgtcaacggacagaatacgatgtcgaa
atgcttcgtgagatgggttacaccaatggtatcgaaaactactcacgtcacatggatggt
cgtaaagaaggtgagccaccgtttactctacttgatttcttcccagaagatttcctcatc
atgattgatgaaagtcacatgaccatgggacagattaaaggaatgtataacggagaccaa
gcccgtaagaagatgcttgtcgattacggcttccgtttaccatcggctcttgataaccgt
ccccttcgtcgtgaagaattcgaaagtcatgtgcatcagattgtctatgtgtcagcgaca
ccaggtgactatgagatggagcagactgagactgtcgttgagcaaatcatccgtccgaca
ggacttcttgatccagaagtcgaagttcgtccaactatgggtcaaatggatgacctcctt
ggtgaaatcaatgcccgtactgaaaaaggagagcgtgtctttgtaacaactttgactaag
aagatggctgaggacttgaccgattacctcaaggaaatgggagtcaaggtcaaatacatg
cactctgatattaagactttggagcgtactgagattatccgtgacttgcgtttgggtgtc
tttgatgttcttattgggattaaccttcttcgtgagggtattgacgttcctgaagttagt
ctggttgctattttggatgctgataaggaaggtttccttcgtaatgaacgtgggcttatc
caaacgattggacgtgctgcccgaaatagtgatgggcacgttatcatgtatgcggataag
attacggagtctatgcagaaagctatggatgaaactgctcgtcgtcgtgaaatccaaatg
gcctataataaggagcacggtattactccgcaaacgattaagaaagaaattcgtgacctt
atttcgattaccaagaccaatgaagcagaagtggcagaggatactgtgaactactgtgcc
atgaacaagaaagaacgccaagaagccatcaagaaacttcaaaagcaaatgcacgaagcg
gcagagctgcttgattttgaattggcagcccaaattcgtgatatggttctagagctgaag
agtatggattaa
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integrated database retrieval system
