Sphaerodactylus townsendi (Townsend's least gecko): 125425737
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Entry
125425737 CDS
T08213
Symbol
SCN2A
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stow04040
]
125425737 (SCN2A)
Ion channels [BR:
stow04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
125425737 (SCN2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
IQCJ-SCHIP1
ATP-synt_B
IQ
FraC
Neur_chan_memb
Lustrin_cystein
HB_ELP1
Motif
Other DBs
NCBI-GeneID:
125425737
NCBI-ProteinID:
XP_048339268
LinkDB
All DBs
Position
LG02:complement(33422250..33557764)
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AA seq
2009 aa
AA seq
DB search
MAQSMLVPPGPDSFHFFTRESLAAIEERIAEEKAKKPKQERKDIDDDENGPKPNSDLEAG
KSLPFIYGDIPPGMVSEPLEDLDPYYLNKKTFIVLNRGKAIFRFSATSAVYLLTPFNPIR
KIAIKILVHSLFSMLIMCTILTNCVFMTMSNPPEWTKNVEYTFTGIYTFESLIKILARGF
CLEGFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVG
ALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCLIWPPDNSTFQINITSYFNSS
AGENGTFINTTISTFNWNEYVDDDSHFYFLDGQNDALLCGNSSDAGQCPEGYMCVKAGRN
PNYGYTSFDTFSWAFLSLFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINL
ILAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQAAALAAAAGESREFSEPV
GVGGFSESSSATSKLSSKSAKERRNRRKKRKQREQSEGDEKDEDDFHKSESEDSIRRKGF
RFSIEGNRLTYEKRFSSPHQSLLSIRGSLFSPRRSSRTSLFSFRGRAKDIGSENDFADDE
HSTFEDNESRRDSLFVPHRHSERRNSNISQASRSSRMIPILPSNGKMHSTVDCNGVVSLV
GGPPALMSPTGQLLPEGTTTETELRKRRSSSYHMSMDFLSDHAARQRAMSIASILTNTME
ELEESRQKCPPCWYKFANMCLIWDCCAPWLKIKHVVNLIVMDPFVDLAITICIVLNTLFM
AMEHYPMTPQFNNVLSVGNLVFTGIFTAEMFLKIVAMDPYYYFQEGWNIFDGIIVSLSLM
ELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFA
VVGMQLFGKSYKECVCKISNDCELPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQ
TMCLTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVARIQKGIDY
VKRKVHEFVQKAFVRKQKALDEIKPLEDLNNKKDSCISNHTIVDIGKDLNYLKDGNGTTS
GIGSSVEKYIIDESDYMSFINNPSVTVTVPIAVGESDFENLNTEEFSSESDLEESKEKLN
ASSSSEGSTVDVGVPQIGEQPEAEPEESLEPEACFTEGCVRKFKCCQVSIEDGKGKLWWN
LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE
MLLKWVAYGFQIYFTNAWCWLDFLIVDVSLISLTANALGYSELGAIKSLRTLRALRPLRA
LSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNTSTGEMFD
ISQVDNQTQCEELIERNETARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRN
VEEQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKK
YYNAMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQAFDISIMILICLNMVTMMVETDDQT
DAMENILYRINLIFIVLFTGECVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAEIIE
KYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAI
FGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGEPDCDPNKD
HPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFE
MFYEVWEKFDPDATQFIEFSKLSNFAASLDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLD
ILFAFTKRVLGESDEMDALRVQMEDRFMAANPSKASYEPITTTMKRKQEEVSAVIIQRAF
RAYLLKQKIKKISCLLNKDRIKAGDDTLIKEDLIIGKLNDNSTPEKNDMTPSTTSPPSYD
SVTKPDKDKYEKDKSEKEDKGKDIRDSKK
NT seq
6030 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatcaatgctggtaccaccaggacctgacagcttccactttttcacgagagaa
tctctggcagctatcgaggaacgtattgccgaggaaaaagctaagaagcctaaacaagaa
cgcaaagacattgacgacgatgaaaatggacccaaacccaatagtgacttggaggctggc
aaatcactgccctttatttatggagacatccccccgggaatggtctctgagcctttagaa
gacctggacccgtactaccttaacaaaaaaacatttatagtattgaatagagggaaggcg
attttccgattcagtgccacctctgctgtgtacctgttaacgcctttcaaccctattaga
aaaatagctattaaaattttggtacattcattattcagcatgcttattatgtgcactatt
ttgaccaattgtgtatttatgaccatgagtaaccctccagaatggaccaagaatgtagaa
tacactttcactggaatttatacttttgaatccctaataaaaattcttgcaaggggcttc
tgtttagaaggtttcactttccttcgtgacccttggaactggcttgacttcactgtcatt
acatttgcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattc
agagttctccgagcattgaaaacaatatcagtcattccaggcctgaaaactattgtggga
gccctaattcagtcagtgaagaagctctccgatgtaatgatcctgactgtgttttgtctg
agtgtgtttgcgctcatagggctccagcttttcatggggaacttgaggcataaatgtctg
atctggccaccagacaattccacttttcagataaacattacttcctacttcaatagctca
gcgggagaaaacggaacatttataaacacaaccatcagcacatttaactggaatgagtat
gtcgacgatgacagtcacttttactttttggatggacaaaatgatgctttgctgtgtggc
aacagttcagatgcaggtcaatgtccagaaggatatatgtgtgtaaaggctggtagaaat
cccaactatggctacacaagctttgataccttcagctgggccttcttgtctctctttcgg
ctgatgactcaggactactgggagaatctgtatcaactgaccttgagagctgctggcaaa
acatacatgatctttttcgttctggtgatcttcctgggctctttctatctgatcaacttg
atcctggctgttgtcgccatggcctatgaagaacagaatcaggctaccatggaagaggcg
gagcagaaagaggccgagttccagcagatgcttgagcagctgaaaaaacaacaagaagaa
gctcaggcagctgctttagctgcagcggcaggcgaatcccgagagttcagtgaacctgtg
ggtgtaggagggttctcggagagttcttcggcaacgtcaaagctgagttcaaagagtgct
aaagagaggaggaacaggcggaaaaagagaaaacagagagaacaatctgaaggagatgaa
aaggatgaagatgactttcacaaatctgaatcggaggatagcattagaaggaaaggcttt
cgattctccattgaaggaaacagactgacatatgaaaaacggttttcttccccacaccag
tcgttgctgagcattcgagggtccctgttttccccacggcgcagcagcagaactagtctt
ttcagcttcagaggccgagcaaaggatataggatctgagaatgactttgcggacgatgag
cacagcacatttgaagacaacgagagcagaagagattcactgtttgtccctcataggcac
agtgagcggcgcaatagcaacatcagtcaggccagccgatcatcccggatgatacctata
cttccatcgaatgggaagatgcatagcactgtggattgcaatggggtggtgtccttggtt
ggtgggcctccagctctcatgtcacccacaggccaacttctacctgagggtaccactaca
gaaacagagttaaggaaaaggcgctcaagttcttaccatatgtctatggattttttgtct
gatcatgctgcaagacaacgagcaatgagtatagctagcatacttactaacacaatggaa
gagcttgaggaatccagacagaaatgccctccatgctggtataaatttgctaacatgtgc
ttgatctgggattgctgtgctccatggttaaagataaaacacgttgttaacttgattgtg
atggacccatttgttgacctggctatcaccatctgcatcgtcttgaacaccttgttcatg
gccatggaacattatccgatgacacctcagtttaataatgtgctgtcagtcggaaacttg
gtgttcactgggatcttcacagcagaaatgtttctgaagatagtagccatggatccttat
tattatttccaagaaggctggaatatttttgatggcattatcgtcagccttagtttaatg
gaactgggccttgcaaacgtggaaggattatccgtcctaagatctttcagattgttgcga
gttttcaagttggctaaatcctggccaaccttaaatatgttgataaagatcattggcaac
tcagttggagctctgggaaatctgaccttagtcttggccatcatcgtcttcatctttgct
gtggttggaatgcagctatttggcaaaagttacaaagaatgtgtctgcaagatctctaac
gactgtgaacttccacgttggcacatgaacgactttttccactctttcttgattgtcttt
cgagtcctgtgtggagaatggatagagaccatgtgggattgtatggaagttgctggacaa
acaatgtgccttacggtcttcatgatggttatggtgattggaaatctagtagttttgaac
ttgtttctagccttgttgctgagctccttcagttcagacaatctcgctgctacagacgat
gacaatgaaatgaacaatctgcagattgctgtggcaaggattcaaaagggcattgattat
gtgaaaagaaaagtgcacgaatttgtccaaaaggcctttgtgaggaaacaaaaagcgtta
gatgaaatcaaaccacttgaagatttgaacaacaagaaggacagctgcatttccaaccat
actatagtagacattggtaaagatctcaactaccttaaagatggtaatggaactaccagt
ggtataggcagcagtgtggaaaaatacatcattgatgaaagcgattacatgtcattcata
aacaacccaagtgtaactgtgactgtacccatagctgttggagaatcagattttgaaaat
ctaaatacggaagagttcagcagcgagtcagatttggaagaaagcaaggagaaactaaat
gcatctagctcatctgaaggcagcacagttgatgttggagttccccaaataggagagcaa
ccagaggccgaaccagaagaatctcttgaaccagaagcctgttttacagaaggctgtgtg
cggaagttcaaatgctgccaagtcagcatagaagatgggaaagggaaattatggtggaac
ctccggaagacctgctacaaaatagtagaacataattggtttgaaacttttattgtcttc
atgattcttctcagcagcggcgctctggcctttgaagatatatatattgaacagcgcaag
actattaagaccatgttggaatacgctgacaaagtcttcacatacatcttcatcctagaa
atgcttctgaaatgggtagcctatggttttcaaatatatttcacgaatgcctggtgctgg
ctggatttccttattgttgatgtctctttaattagcttaacagcgaatgccttgggctac
tcggaacttggtgcaattaaatcgctgaggactttaagagctttgagacctctaagagcc
ttatcaagatttgaaggaatgagggttgtggtgaatgctcttttgggagctatcccatct
atcatgaatgtacttcttgtgtgtcttatattctggctcatcttcagcattatgggagtt
aatctgtttgccggcaagttctaccattgtgttaatacttccactggcgaaatgtttgac
atcagtcaagttgacaatcagactcaatgtgaggaactcatagaaagaaatgaaacagcc
cgatggaaaaatgtgaaagtcaactttgataacgtgggtcttggttacctttctttgctt
caagtagccacttttaaaggctggatggatatcatgtacgcagctgtggattcacgaaat
gtagaggagcaacctaaatatgaggataacctatatatgtacctttactttgtcatcttt
atcatctttggctccttctttacattgaacttatttattggtgtcatcatagacaatttt
aatcagcaaaaaaagaagtttggaggtcaagatatctttatgacagaagaacagaagaaa
tactacaatgcaatgaaaaaactagggtccaagaaaccacagaaacctattcctaggcca
gcaaataaattccaaggcatggtttttgattttgtaacaaagcaagcttttgacatcagc
atcatgatccttatctgccttaacatggtcaccatgatggtagaaacagatgaccaaacc
gatgcaatggaaaacattttataccgaattaatctgatcttcatagttcttttcactgga
gaatgtgtcttgaaactgatctctcttcgatattattatttcaccattggctggaacatc
tttgattttgtggttgtcattttatccatcgtaggtatgtttctagcagagattattgag
aaatactttgtgtctcctaccttgttccgagttatccgacttgccaggataggtcgaatc
ctacggcttatcaagggtgctaaagggatccgcactctgcttttcgccttgatgatgtct
ctgcctgccttatttaacattggtctcctgcttttcctcgtcatgttcatctatgctata
tttggaatgtccaacttcgcctatgtcaagagagaagttgggattgatgacatgttcaac
tttgaaacctttggtaacagcatgatctgcctttttcaaattaccacctctgctggctgg
gatggcttactggcacccattcttaacagtggggagccagattgtgaccctaacaaggat
catccaggaagctcagtcaaaggagactgcggcaatccttctgttgggattttcttcttt
gtcagctacattatcatatcgtttctagtcgtagtaaatatgtatattgctgtaattctg
gagaacttcagtgtcgcaacagaagaaagcgctgaacctttgagtgaagatgactttgaa
atgttctatgaagtctgggaaaagtttgatccagatgcaacccaattcatagagtttagt
aaactctccaattttgctgcttcgctggatccacctcttttaatagcaaaaccaaacaaa
gttcagcttattgcaatggacctgcctatggtaagtggtgacagaattcactgccttgac
attttgtttgctttcacaaaacgcgttttgggcgaaagcgatgaaatggacgcccttcgg
gttcaaatggaagatcggtttatggcagccaatccttcaaaagcctcctatgaaccaatc
acaactacaatgaagcgaaagcaagaggaagtatctgctgtcataattcagcgagccttc
cgggcctacctcttaaaacaaaaaattaaaaaaatttcctgccttttaaataaagatcga
attaaagctggagatgacacacttatcaaggaagatctgatcattggtaaactcaatgac
aattctactcctgaaaaaaatgatatgactccctccaccacctctcccccttcctatgac
agtgttacaaaaccagacaaagataaatatgaaaaagacaaatcagaaaaagaagataaa
ggtaaagatatcagggacagtaaaaaatga
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integrated database retrieval system
