Sphaerodactylus townsendi (Townsend's least gecko): 125428522
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Entry
125428522 CDS
T08213
Symbol
TNXB
Name
(RefSeq) tenascin-X
KO
K06252
tenascin
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04510
Focal adhesion
stow04512
ECM-receptor interaction
stow04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125428522 (TNXB)
04518 Integrin signaling
125428522 (TNXB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125428522 (TNXB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
stow00536
]
125428522 (TNXB)
Glycosaminoglycan binding proteins [BR:
stow00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125428522 (TNXB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_Dep-1_3rd
fn3_2
Motif
Other DBs
NCBI-GeneID:
125428522
NCBI-ProteinID:
XP_048344679
LinkDB
All DBs
Position
LG03:complement(12319435..12428732)
Genome browser
AA seq
2608 aa
AA seq
DB search
MPLVATRPSPPPKRLELPAAPESITLEDLESRTRYLITLVARQGSENSRSTRVTTSTTAP
GTSATKVQTTPGSVTAPGVPLSNLNVTDVSPNSLRVTWSAPPSTFHTFSLQYRDPKSSAT
PGEIRVPGTERSVNVMGLNPGTEYDLKLSGETPDGIHSAPVATKASTAPAAAPPEKEKPT
LGSLSVSEVTDSSARLLWDIPTGNFDSFLIQYKDAEGKQRALPMDASSREATIADLVPSR
KYKFNLYGLIGRKRLGPVSTEIVTVASEQGEKVELAALPSLGELVASEITTDSVRLSWSV
PSGSFDSFVVQFKDAEGRPHSLPVEGVFREVIVPNLSPSHRYRFNLYGVANRKRLGPVTK
DVVTASSPERPGEDRAVQPSLGELSTSDASSNSVRLSWTVRSGRFDSFQVQFKDAEGKPR
ALPVEGDSREVTVPNLSPSTRYKFNLYGVSGKQRYGPISAEALTAASVVSPEGRIPIQPS
LGELSVSDVTSDSVILSWTVPTGSFDSFLVHFKDTEGKVQMLPVEGVFRTVTVPNLAPSH
RYKFNLYGVSGRKRSGPISTDATTAATVTSPEVTTERVPVQPSLEQLAVSDITSDSLRLS
WIVRTGNFDSFLVHYKEPEGKSQSLPVEGPFRTVTVQNLEPSQKYKFNLYGISGNKRLGP
LSVDAVTAPVPAPPEAALTLKPSLGELSALDVTTDSLRLSWGVSTGSFDSFLVQYKDAEG
RPQSLPVDGGSREVILSNLAPSHRYKFNLYGVSGRKKMGPVSIDVFTASQMVKPTSPLRL
GELSAGNIMPSSLDLSWNIEAGNFDSFIIEYRDAEDHPQALPVDGVLRSFHIHDLAPSHR
YKFNLYGISGRKRLGPVSTEAVTAPSPTAPPAQPSLGELSVSDVTSDSARLFWTVSTGTF
DSFTIQYKDADGKPQALPVEGALREVTMSNLAPSRRYKFNLYGVSGRKRLGPVSADAVTA
SLTTEPPAQPSLGELSVSDVTSDSARLSWTVPTGTFDSFTIQYKDADGKPQALPVEGVFR
EVTVPNLAPSRRYKFNLYGVSGRKRLGPISTDTVTAPLPTATPAQPSLGELSVSDVTSES
ARLSWTVPMGTFDSFTIQYKDSDGKPQTLSVEGVLREAIITSLAPSRRYKFNLFGVSGRK
RIGPISTDTTTAPLPTAPPVQPSLEEFRVYDVTSDSIRLSWIISTGRFDSFQIQYKDTEG
QPQTLPVNGDSREVTVPNLAPSHRYKFNLYGVSGHKRLGPVSVDATTAPSPTTPPPQPSL
GELSVSDVTSDSARLSWTVPTGSFDSFMIQYKDADGKPQALPVEGVSREVTISSLAPSRR
YKFNLYGVSGQKRLGPVSADAITASPPQDPPVPPSLGGVSASDITSNSLRLSWTVLNGVF
DSFVIQYKDAEGKLQALPVEGAVRDVTVPNLMPSRRYKFNLYGLTGRKRLGPVSTDAVTA
PLEENSAPPTLGDLFVSDVTSNSAHLSWTVPTGNFNSFLVQFKDADGKPQSLPLDGSARQ
TTISGLSPSRRYKFNLFGVSGRKRLGPISVDTVTASSEREDAVKPSLGELAVSDVTSNSA
LLSWTVSAGSFDSFLIQYKDAEGQPQALPVAGGSHEVTVSNLAPSHRYKFNLYGVSGRKR
FGPISAEATTVSTPEVTPRLEDLSISDVTSDSVSLSWAVPAGEFDSILVQYKDAKGKVQM
LPLNGNSRNVTVPNLASSRKYKFNLYGIYGRKRLGPITIDAVTDPRPQSEEPVQLGLGEL
LAGDITSESVLLSWTVKNGNFDSFIIQYYDAEGKAHALPVDGGLHSLRLHDMTPSHRYRF
NLYGVSGRKRLGPISTEAVTASAASNQVVPPRPSLGEIKASNVTGTSVHLSWSVVSGNFD
FFTIQYRDAEGKAQSLRVDGRSREAVISNLAPSRRYKFNLYGLVGRKRLGPISTEAITAR
MVEPEKHPRLGELSISEVTKDSVRLSWTIAVGKFDSFLIQYKDAEDMPQTLPVDADSRSF
VVPGLQPSQKYKFNLYGFSGGKQIGPVSTDAVTAFPEAISKPVTLLKNLVVSDVTPTTLQ
LTWEAPEGQCDSFQIRYKYSLVGSGKNPPPAKEAEVPGTERSAVLRGLTPNKEYSVTLYG
IKNGLEVANINTVARTSGLELDSPQDLRFSDIRETSVVTSWRGPSSRVDRYKISFQPSDG
GEPRSISVDGSVLKTIIKGLTPGTSYEVSVMSIRGFEESEPLVGYVTTVPDGPANLRAVN
VTDSSAVLIWQPAVAEMNSYIVTYGPAGGSRVSESVPGNRAELRLSGLQLDTEYRASVYG
EKEGNRSSPVSATFTTGADGPRNLQASEISARSARLTWLPPRAPPGGYLLSYETPYGQTK
EITVDASVTSYELQDLFPSSRYQVQVQALRRGMPTAPTSTSFTTGHLTYPFPRDCGEESW
NGPGRSRETTIYLGGNRDRAIQAYCDMETDGGGWLVFQRRMNGKTDFWRDWQDYATGFGN
RSDEFWLGNDALHEMTTSRDYELRVDLRAGNESVYALYDGFRVDSPTDYYRLHLGSYSGT
AGDAFTYHSGSVFSTRDRDPNRVIIPCAVSYRGAWWYHNCHYANLNGLYANNRDHQGINW
FNWKGFEFSIPFTEMKLRPRGFQPLRRV
NT seq
7827 nt
NT seq
+upstream
nt +downstream
nt
atgcctttggttgccacccggccctccccacctcccaaacgcctggagctaccagcagca
cctgagagcatcaccttggaagacctggaaagccgcacccgatatctcatcactctggtc
gcccgccaaggcagtgagaacagccgatccaccagggtcacgaccagcactaccgctcca
ggtacatctgcaaccaaggtccaaaccacgccgggttccgtcacagctccaggggtgcca
ttaagcaacctaaatgtgaccgacgtctctccgaacagtctccgggtgacttggtctgcc
ccgcccagtaccttccacaccttttcccttcagtatagggatcctaaatccagtgcaacc
ccgggggagattagagtgcccgggaccgagaggagtgtcaacgtgatgggtttgaacccc
ggcactgaatatgatctgaagttaagtggggagacacccgatgggatccacagtgctcca
gttgcaacaaaggcatccacagcacccgcagcagcgccaccagaaaaggaaaagcccacc
ctgggttcgctctctgtttcagaagttacagatagctctgcgcgcctattgtgggacatt
cccactgggaacttcgactcctttttgatccagtataaagatgctgagggcaaacagagg
gcacttcccatggatgcgagctctcgggaggccactatcgccgatttggtaccttcccga
aagtacaagtttaatctctatggactcataggccgcaagcgacttggtcctgtctccaca
gagatagtcacagtggcatcggaacaaggggaaaaggtggaattggcggcattaccgagc
ctgggagaacttgttgcctcagaaatcacaacagattccgtccgtttgtcttggagcgtc
ccttccgggagctttgattcctttgtggtccagttcaaggatgctgaaggccggcctcat
tctttgcctgtggagggggtcttccgcgaagtcattgttcccaacctgtctccttcccat
agatacaggttcaatctctatggcgtcgccaaccgcaaacgtctcggccctgtcactaaa
gatgttgtcacagcgtcatctccagaaaggccaggtgaggacagagccgtccagcccagt
ctgggggagctctctacctccgatgcctccagcaattctgtccgtctctcctggactgtc
cgcagtgggagattcgactcctttcaagtccaattcaaggatgccgagggcaagccccgg
gcattgcccgtggaaggagactcccgtgaggtcaccgtccccaacctctcgccttccacg
agatacaagttcaacctctatggggtctccggaaagcagcgctatggcccgatttccgcc
gaggctttgacagctgcttctgtggtttcaccggagggaaggatccctattcagccgagc
ttgggagagctctcagtctctgatgtcaccagtgactctgtcatcctctcctggacagtt
cctactggaagctttgactccttcctggttcatttcaaggacacagagggcaaggttcag
atgctgcccgtggagggtgtcttccgcacggtcactgtccccaacctggctccctcccac
agatacaagttcaacctctatggtgtctctggccgcaagaggtcaggcccaatttccaca
gatgccaccacagctgcaacagtaacatcaccagaggtgactacagaaagggttccagtt
cagcctagtctggagcaactcgcagtgtctgacatcactagtgactctctccgactttcc
tggattgtccgcactgggaattttgattccttcttagtccattacaaagaaccagaagga
aaatctcagtcgttgcctgtggaggggcctttccgcacagtgaccgtccaaaacttggaa
ccctcccagaaatataagttcaacctttacggcatctctggcaacaagcgcctcggtcct
ctctccgtggatgctgtcacagcccccgtgccggcacccccagaagcagcactgactctg
aagcctagcctgggggaactctcagccttagacgttactaccgattcactccgcctctcc
tggggggtctctactgggagctttgattccttcctggttcagtacaaggatgccgaaggt
agacctcagtctcttcccgtggatgggggctcccgcgaggtcatcctttccaaccttgca
ccttcccacagatacaaattcaatctctatggtgtctccggccgcaagaaaatgggtccg
gtttccattgatgttttcacagcttcacagatggtaaaacctacgtcgccactcagactc
ggggagctgtcagcgggcaatatcatgcccagttcccttgacctgtcctggaatattgag
gcagggaactttgattcttttatcattgagtaccgagatgctgaggaccatccccaagcc
ctccccgtcgacggggtcctacgctccttccacatccatgacttggctccttctcacaga
tacaaattcaacctctatggcatttcaggtcggaagcgtttgggccctgtctccaccgaa
gccgtcacagccccctcaccaacagcacccccagcccagcccagcctcggggagctctct
gtctctgatgtcaccagtgattctgcccgcctcttctggactgtatccacaggaaccttc
gactctttcacaatccagtacaaagatgctgatggcaaaccccaggccttgcccgtggag
ggggccttgcgcgaggtcaccatgtccaacctggctccgtcccgcagatacaagttcaac
ctctacggtgtctctggccgcaagcgtcttggccctgtttctgctgatgctgttacagcc
tccttaacaacagaacccccagcccagcccagcctgggggagctctcagtctccgacgtc
accagtgactcggcccgcctctcgtggaccgtccccactggcaccttcgactccttcacg
atccagtacaaagatgctgatggcaaaccccaggccttgcccgtggagggggtcttccgt
gaggtcaccgtgcccaacctggctccatcccgcagatacaaattcaacctctatggagtc
tccgggcgtaaacgtctaggccccatttccactgacacagtcacagcccccttaccaaca
gcaaccccagcccaacccagcctaggggagctctcggtctctgacgtcaccagtgagtct
gcccgcctctcatggaccgttcccatgggaaccttcgactccttcacgatccagtacaag
gactccgatggcaagccccagacattgtccgtagagggggtcttgcgcgaagccattatc
accagcctggctccgtcccgcagatacaagttcaacctcttcggagtatccgggcgcaag
cggattggccccatttcaactgataccaccacagctcctttaccaacagcacctccagtc
cagcccagcctagaggaattcagagtctatgatgtcaccagtgattctatccgtctctcc
tggatcatctccacaggaaggtttgactccttccagatccagtacaaggacacagagggc
caacctcagacattgccagtaaatggagactcccgtgaggtcactgtccccaacttggct
ccttcccacagatacaagttcaatctctacggtgtctctggccacaagcgccttggccct
gtttctgtggatgccacgacagccccttcaccaacaacaccacctccccaacccagccta
ggggagctctcggtctctgatgtcaccagcgattctgcccgtctctcctggaccgtcccc
actggaagttttgactccttcatgatacagtacaaggatgctgatggcaaaccgcaggcc
ttgcccgtggagggggtctctcgtgaggtcaccatctccagtctggctccttcccgtaga
tacaagttcaatctctatggtgtctccggtcagaaacggctgggtcccgtttctgctgac
gccatcacagcatcaccacctcaagatccaccagttccccccagcctaggcggggtgtct
gcttctgacatcaccagcaactccctacgtctctcatggactgtcctcaatggtgtcttt
gactccttcgtcatccagtataaagatgcggagggcaaacttcaagccctcccagtggag
ggagccgtccgtgatgtcactgtcccgaatctcatgccttcccgcagatacaagttcaac
ctttacggactgactggccgcaagcgtcttggtcccgtttctactgatgctgtcacagct
ccactggaggaaaattcagctccgcccaccttgggggatctttttgtttctgatgtcacc
agcaactccgcccacctctcctggactgtccccacagggaactttaactccttcttggtc
cagttcaaggatgctgatggcaaacctcagtcactgcccttggatggaagtgcccgccag
accaccatctcaggcttgtctccttcccgccgatacaaattcaacctctttggggtgtct
gggcgcaaacgccttgggcccatctctgttgatacagtcacagcctcgtcggagagggaa
gatgcagtaaagcccagtctaggagaactcgcagtctctgatgtcaccagcaattctgcc
cttctttcctggacggtgtccgccgggagctttgattcttttctgatccagtacaaggat
gcagagggccaaccccaggcgcttcccgtggcaggaggctcccacgaggtcactgtctcc
aacttggctccttcccacagatacaagttcaacctctatggcgtctcaggccgcaagcgc
tttggccccatttctgctgaagcaaccacagttagtacccctgaggtcacgcctcgccta
gaagatctctccatctccgatgtcaccagtgattctgtcagcctctcctgggctgtccct
gcaggggaatttgactcaatcttagtccagtacaaagatgcaaagggcaaggttcagatg
ctgcccttaaacggcaattcccgtaacgttacagtccctaacctggcttcttctcgcaaa
tacaagttcaacctttatggcatttatggccgtaagcgtcttggtcccatcaccatcgat
gctgtcacagacccacgcccccaatcggaggaacctgttcaactcgggctcggagaattg
ttggctggtgacatcacttctgaatcagtcctcctctcctggactgtcaagaatggaaat
tttgattcctttatcatccagtactacgacgcagaaggcaaggcgcacgctttgccagtg
gatgggggattgcactcgctgcggctccacgacatgacaccctcccacagatacaggttc
aacctctatggagtctctggccgcaagcgcctgggtccgatctccacagaggcagtaaca
gcgtctgcagcctctaaccaggtagtccctccacggcccagtcttggtgagatcaaagcc
tccaatgtcaccggcacgtctgtccacctgtcctggagtgttgtgtcggggaattttgac
ttcttcactatccagtaccgagatgcagagggcaaagcccagtcgttgcgtgtggatgga
cgctcccgcgaagccgtcatctccaatttggcaccttctcgcagatacaaattcaatctt
tacggccttgttggacggaagcgcctcggccccatttccaccgaagctatcacagctcgg
atggtggagccggaaaagcatcccagactgggggaactgtccatctccgaggtgaccaag
gattccgtccgcctctcatggaccattgctgttgggaagtttgactctttcctcatccaa
tacaaggatgccgaggacatgccccaaacgttgcctgtagacgctgactcccgctcattt
gtcgtgcctggccttcagccttcccagaaatacaagttcaatctctacggtttttcaggt
gggaagcagattggacccgtttctactgatgctgtcacagccttcccagaagccatcagt
aagccggtcactttgctcaagaacctggttgtctccgatgtgacccccaccaccctgcag
ctcacatgggaagcccccgaaggacagtgcgattccttccagatccgatacaaatattcc
ctcgtgggaagcgggaagaaccccccgccagccaaggaagccgaagtgcccgggactgag
cgctcagctgtgctgaggggtctgacccctaacaaagaatacagtgtcacgctgtacggt
atcaagaatggattggaagtggccaacatcaacactgtggcgcggacaagtgggctagaa
ctggacagtcctcaggacctgcggtttagtgacatccgcgagacctccgtcgtgaccagc
tggaggggaccatcctcccgtgtggaccgctacaaaatttcttttcagccctcagatggg
ggggagcccagaagcatctctgtggatggatctgtgctaaagacaatcatcaaaggcctg
acccccggaacgagctatgaggtcagcgtgatgtcaatccggggctttgaagagagcgag
cccttggtgggctatgtcaccacagttccagatggtcctgccaacctgcgagctgtcaac
gtgaccgattcctctgccgtgctgatttggcagcctgccgtggccgagatgaacagctac
attgtcacctacggacctgcgggtggctctagggtgtccgaatccgtaccagggaaccgg
gctgagctgcggctgtcagggctacaactggacacagaatatcgggccagtgtctacggg
gagaaggaaggaaaccgtagctccccagtcagtgctaccttcaccactggagctgatgga
ccacgaaatctccaggctagcgaaatctcagcccgcagtgcccgtctgacctggttacca
ccccgtgcccctcctggcggttatctattgagctatgaaaccccatatggacaaacaaag
gagatcaccgtggatgcttctgtcacctcctacgaactccaggatttgtttccttctagt
cggtaccaggttcaagtccaggcactgaggagaggcatgccgacagcccccacctcgacc
tctttcaccactgggcacctgacatatcctttccctcgggattgcggtgaggagagttgg
aatggaccagggcgatctcgagaaacaaccatttatctggggggcaaccgtgaccgggct
atacaggcatactgcgacatggagaccgatggtggaggttggctggtcttccagcgtcgg
atgaacggcaagacagatttttggcgtgactggcaggattatgccactggctttggcaac
cgctccgatgaattttggctagggaatgacgctctgcatgagatgaccacatcaagggac
tacgaactgcgtgtggacctccgtgctgggaatgagtccgtctacgccctctacgacggt
ttccgcgtggactccccgaccgactattaccgcctgcacctgggcagctacagtggcaca
gccggtgacgctttcacctaccactcgggtagcgtcttctccacccgcgaccgggacccc
aaccgggtcattattccgtgtgccgtgtcgtaccgtggggcgtggtggtaccacaactgc
cattatgccaacctcaacgggctctacgcaaacaaccgcgaccaccagggcatcaactgg
tttaactggaaagggttcgagttctccatcccctttaccgagatgaagctccggccccgc
ggcttccaacccttgcggcgggtgtaa
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integrated database retrieval system
