Sphaerodactylus townsendi (Townsend's least gecko): 125433366
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Entry
125433366 CDS
T08213
Symbol
CACNA1S
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1S
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04010
MAPK signaling pathway
stow04020
Calcium signaling pathway
stow04260
Cardiac muscle contraction
stow04261
Adrenergic signaling in cardiomyocytes
stow04270
Vascular smooth muscle contraction
stow04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125433366 (CACNA1S)
04020 Calcium signaling pathway
125433366 (CACNA1S)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
125433366 (CACNA1S)
09153 Circulatory system
04260 Cardiac muscle contraction
125433366 (CACNA1S)
04261 Adrenergic signaling in cardiomyocytes
125433366 (CACNA1S)
04270 Vascular smooth muscle contraction
125433366 (CACNA1S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stow04040
]
125433366 (CACNA1S)
Ion channels [BR:
stow04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
125433366 (CACNA1S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
125433366
NCBI-ProteinID:
XP_048353825
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Position
LG05:complement(78853518..78953509)
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AA seq
1407 aa
AA seq
DB search
MEPTSVQDDIQKKKQQKEKAKKAALEAPPRPLRSLFCLTLQNPVRKACIAIVEWKPFETI
ILLTIFANCVALAIYLPMPEDDSNKVNSRLEKLEYFFLIVFAIEAALKIIAYGFLFHADA
YLRNGWNVLDFTIVFLGVFTVILERISVMESALLSGQGGFDVKALRAFRVLRPLRLVSGI
PSLQVVLNSIMKCMLPLLHIAVLVVFMLIIYAIVGQELFKGKMHKTCYFIGTDIIATVEN
EKPSPCTNSGHGRHCTINGSECRGWWPGPNDGITHFDNFGFSMLTVFQCISMEGWTQVLY
WVNDAIGNEWPWIFFVSLILLGSFFILNLILGVLSGEFTKEREKAKSRGTFQKLREKQQL
EEDMKGYMDWIIHAEVMDSDRTRGEGMMPLDEGGSETESLYEIEGMNKWILFFRHWRRWN
RLFRRKCREVVKSKFFYWFVIMIVSLNTLSIATEHHNQSDWLTKVQDIANRVLLALFTVE
MILKMYALGLHQYFMSIFNRFDCLVVCTGILELILVEIVSMSPLGISVLRCIRLLRIFKI
TKYWTSLNNLVASLLNSVRSIASLLTLLFLFIVIFALLGMQLFGGKFDFDDAIIRRSTFD
NFPQALISVFQVLTGEDWTSVMYNGILSYGGPSYPGILVCIYFIILFVCGNYILLNVFLA
IAVDNLAEAETLTSAQKAKAEEKKRKKMARSYPEKSDEEKQLLAKKLELKAKGEGIPTTA
KLKVDEFESNVNEIKDPYPSADFPGDDEEDEPEIPLSPRPRPLAELQLKEKAVPMPEASA
FFIFSPTNKIRVLCHRIVNATWFTNFILLFILLSSISLAAEDPIRADSFRNKILGYFDIG
FTSVFTVEIVLKMTTYGAFLHKGSFCRNYFNILDLLVVAVSLISMGFESSTISVVKILRV
LRVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVLVSALLQFMFACIGVQLFKGKFYSCT
DPLKITEQECRGHFISYVDADPTQIVLGERIWQHNDFHFDNVFSAMMSLFTVSTFEGWPK
LLYKAIDTSSENMGPVYNHHMGTAIYFIVYLILIAFFMMNIFVGFVIVTFQEQGETEYKD
CELDKNQRQCVQYALKARPLKCYIPKNPYQYQIWYIVTSSYFEYLMFFLITLNTICLGMQ
HYNQSETMNQVSDVLNVVFTILFTVEMILKLIAFKAKGYFGDPWNVFDFLIVIGSIIDVI
LSQIDTVLASRGGLYCLSGGCNGIPPTTGNEENGRISITFFRLFRVLRLVKLLSRGEGIR
NLLWTFIKSFQALPHVALLIVMLFFIYAVIGMQMFGKVALVDGTQINRNTNFQTFPQAVL
LLFRYVSYKPFSVLGFDSTTAKVLGTALISGGLSCLVKDSSFLKLVRDEMAAALQMELTE
VEDVAAMLLKTKESLAGSLEATLDTRL
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atggagcccacttctgtccaggatgatatccagaagaaaaagcaacagaaagaaaaggcg
aagaaagcagcactggaagctccccccaggcctctccggtccctgttctgcctcaccctc
cagaacccagtgcgcaaggcctgcattgctattgtggaatggaagccctttgagaccatc
atcctgttgaccatctttgccaattgtgtggcactagctatctacctgcctatgcccgaa
gatgattccaataaagtcaactccagactggagaaactagaatacttctttctgatcgtg
tttgccattgaggcagcgctaaagatcatagcctatggatttctattccatgcagatgct
tacctacgaaatggctggaatgtgctggattttaccatagtctttttaggagttttcacg
gtgatcctggagagaatcagcgtaatggagagtgcccttctcagtgggcagggtggtttt
gatgtcaaagctctgagagcctttcgtgtgctacggcctctacgcctggtgtcgggaata
ccgagcctgcaagtggtactgaactctattatgaaatgcatgttgcccctgctccacatt
gctgtgcttgtcgtcttcatgctgattatctatgccattgtagggcaggagctctttaag
ggcaaaatgcacaagacctgctacttcattgggacagatatcattgccacagtagaaaat
gaaaaaccatctccgtgtaccaactcgggccatgggcgccattgcaccatcaatggctct
gaatgcagaggctggtggccaggtcccaatgatggcatcactcattttgacaactttggg
ttttctatgctgactgtcttccagtgtatctccatggagggttggactcaggtcctctac
tgggtaaatgatgccattgggaatgagtggccctggatcttctttgtcagcctcatctta
cttgggtcattttttatcctcaacctgatcttgggtgtgctcagtggggagttcaccaaa
gagcgtgagaaagccaaatcacgaggtacattccagaaactgagggagaaacagcaatta
gaggaagacatgaaaggttacatggattggatcattcatgcagaagtcatggacagtgac
cggacccgtggtgaagggatgatgccattggatgaaggcggctcagagacggagagcctg
tatgaaattgagggcatgaataaatggatcctcttcttccggcattggcggcgatggaac
cgtctttttcgccggaaatgccgtgaagtcgttaagtccaagtttttctattggtttgtg
atcatgattgtctccttgaatacactctcaatagcaactgagcatcacaatcagtctgac
tggctgaccaaggtacaagatattgccaaccgggtgctgctagccctcttcacagttgag
atgattctgaagatgtatgccttgggtctgcaccagtacttcatgtccatcttcaaccgc
tttgattgcctggtggtttgtactggaattctggaacttatactggtggaaattgtttcc
atgagtcccttgggcatctcagttttgaggtgcattcgcctgttgaggatcttcaagata
accaaatattggacctctctgaacaacttggtggcatctttgctgaattcagtgcgctcc
attgcttccctgcttactctcctcttcctgttcattgtcatctttgcccttttagggatg
cagctttttggaggcaagtttgacttcgatgatgcaataatacggcgtagtacctttgat
aactttcctcaggcactcatcagtgtcttccaggtcttgactggggaagactggacatct
gtaatgtataatggaatcttgtcctatggaggaccatcataccctggtattctggtctgc
atttatttcatcattctctttgtctgtgggaactatattttgctcaatgtcttcttggcc
attgctgtggataaccttgctgaagctgaaacgttgacttctgctcagaaagctaaagct
gaagaaaaaaagagaaagaaaatggccagaagttaccctgagaaatcagatgaggaaaaa
cagttgctggctaagaagctggaactgaaagccaagggggaaggaatccctactacagct
aagttgaaagtagatgagtttgagtccaatgtcaatgagatcaaggatccttatccttct
gctgacttcccaggtgatgatgaagaagatgagcctgaaatcccactgagtcctcggcca
cgtcctctagcagagctgcagttgaaggagaaagcagtgcccatgccagaagccagtgca
ttcttcatctttagcccaaccaataagatccgtgtattgtgtcaccgaattgtcaatgcc
acctggttcaccaacttcatcctcctctttatcctgctgagcagcatctcactggcagct
gaagatcccatccgagccgattccttcaggaataagatcctaggatattttgacattggc
ttcacttctgtgtttacagtggaaatagttctaaagatgaccacttatggtgccttcctt
cataagggttccttctgccgcaactacttcaacatcctagacttgcttgtggtagctgtc
tccctcatctccatgggatttgaatccagtaccatctcagtggtgaaaatcctaagggtt
ctcagagtactgagaccactgagagccatcaacagagcaaagggcctgaagcatgtcgtc
cagtgtgtttttgtggccatcaagacaattggcaacattgtattagtttctgccttactg
cagttcatgtttgcctgcattggggtccagctcttcaaggggaaattctacagctgcact
gatccactgaagataactgaacaggagtgcagaggacatttcatctcatatgtcgatgca
gatccaacacagattgttcttggtgagcggatatggcagcataatgatttccactttgac
aacgtcttttcggccatgatgtctcttttcaccgtatccacctttgagggatggcccaaa
ctgctgtacaaagccattgataccagcagcgagaacatgggccctgtatataaccatcac
atgggaactgccatctatttcatcgtctatctcatcctcatagcctttttcatgatgaac
atctttgtaggctttgtcattgtaactttccaggagcaaggggaaacagagtacaaagac
tgtgaacttgacaagaaccagcgtcagtgtgtccagtatgccctgaaagcacgccctttg
aaatgttacattcctaagaacccctaccagtatcagatatggtacatcgtgacctcctcc
tactttgaatatctcatgttcttcctgatcacattgaacaccatctgcttaggcatgcag
cattacaatcagtcagaaacaatgaaccaggtgtcagatgttctcaacgtggtcttcacc
atcctctttactgtggagatgattcttaaacttatagccttcaaggcaaagggctacttt
ggggacccttggaatgtctttgatttcctcattgttattggcagcatcattgatgtcatc
cttagtcagattgatacggttcttgcttccagaggtggattgtactgcctaagcggtggc
tgtaatggcattcctcctaccacaggtaacgaggagaacgggcggatctcaatcaccttc
tttcggctgttccgtgtcctgcgactggtaaaattgctaagccgaggagaaggcattaga
aacctactctggaccttcattaagtctttccaggccctgccgcatgttgccctgttgatt
gtgatgttgtttttcatctatgctgtgattgggatgcagatgtttggaaaagttgctcta
gtggatggaacccaaatcaatcggaataccaattttcagaccttcccacaagcggtgttg
ctactgttcaggtatgtatcatataagcccttttctgtgttaggttttgatagtaccact
gccaaagttcttggaacagctctaatctctgggggactcagctgccttgtcaaagacagt
tcatttctgaaattggtgcgagatgagatggctgctgccctccagatggagttgacagaa
gtggaggatgttgcagcaatgttgttgaagacaaaagaaagtttggctggctctttggag
gctactttggataccagactgtga
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