Sphaerodactylus townsendi (Townsend's least gecko): 125433610
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Entry
125433610 CDS
T08213
Symbol
POLRMT
Name
(RefSeq) DNA-directed RNA polymerase, mitochondrial
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
stow03029
]
125433610 (POLRMT)
Enzymes [BR:
stow01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
125433610 (POLRMT)
Mitochondrial biogenesis [BR:
stow03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
125433610 (POLRMT)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
PPR_2
PPR_3
PPR
Sas6_CC
Motif
Other DBs
NCBI-GeneID:
125433610
NCBI-ProteinID:
XP_048354229
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All DBs
Position
LG05:complement(9924341..9990895)
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AA seq
1245 aa
AA seq
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MSLLKLQGALLRGTESLWVVVRSYSSATAKEETRKRWVYEKTELLEVLENRVKQLEANNA
STVVTPKAQEAPARKRGVSQPAPWQAAAPTRKEPAPNLGEKSASHPSRWMEKLSKEKSIK
HKRLLRLEAKLSRAGFETRLSRAGDNAAHGEEKGLSECPTKGKPAPRESRDGLDGLKGAA
APGGLGADPSEGGVASKGLPKQTPKQAPSRAPAKEKLFLEEEGGNRHRNVQLSILAYLDC
CLFLGQTERAHQCLMFYHRSHARRKLLDVQMYNLLMGGYAKKRALNHVGQLFRQLEEAGL
KPNLDSYAAALECMGRSGAHPQVIARCLQQLKEDGLRLEDLLRDSQHKEAETKMALKAIR
RVMPDFQPPPLVRPAEICTVPLFRDFYTKAEPVSYPKLDFTAQELRERFQQQQQLEASNA
VTIESVEAEKPLSEQAVRARELLAALRSRWRAALLQGFQESKLHLHQKQSGQLNLYPFLC
VLKDEEYVDILMQGLSRFPPQGESLLILARELGTKVYNKYVIQKKSRSCLVKNIQRLYDS
YVQLLAKDTPPDNYLPREYWEELEARAGYSPSLVNQDCVWPHSLMVQLGLHLVELLVQVL
KMESNLLTPSLEPKLIPILYHVYSFRSGRQIGFIRPHPLLTRLFSKASETTLTFDSFVMP
MLCPPVPWISPSFGAYLLSPTKLMRCVDGAVQHQMLLERCPRNNLFSVMDALNQLGNCPW
KVNQAVLGVVISIFNDKGDEKLDVPPPPSEAPQPARLTLGGAPLTKSAWKREVAQCRKKA
METFSLRMDTLYKLSIAKHMGDRAFWFPHNMDFRGRTYPCPPHFNHLGNDLTRAILLFAE
GKPLGPRGLDWLKIHLINLTGLKKKSSLQDRLAYANEIVEDVLDSADHPLTGRKWWMTVD
EPWQALACCMEIAMATRAPDPAAYISHFPVHQDGSCNGLQHYAALGRDAIGAASVNLMPF
DVPQDVYSGVAQQVEVFRKKDAEKGTKIAQVLDGFIGRKVVKQTVMTVVYGVTRYGGRLQ
IEKRLKEIEGFPQEYVWEASHYLVQMVFNSLKEMFSGTREIQNWLTESARLIAKSGHAVE
WVTPLGLPIVQPYHRSKIMLVNSNIQSVNLNSRHDVSQKPDTVKQKNAFPCFIHSLDSTH
MMLTALHCHRRGLTFVSVHDCYWTHALTVDIMNQVCREQFVELHSQPILQDLSKFLLKKY
CARFPAEWRQKKPLEFQRLVQLLSSVPKKGDFDLQKVKESTYFFS
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgctgaagctgcagggggcgttgctgcgggggacagaaagcttgtgggttgtg
gtgcgcagttattcctcggccacagcaaaggaagaaaccaggaaaagatgggtgtatgag
aaaaccgaacttttggaagtgctggaaaacagagtgaaacagctggaggccaacaatgcc
tccacggtggtgaccccgaaagctcaggaggccccggcaaggaagaggggcgtctcccag
cctgccccgtggcaggcggccgcaccgaccaggaaggagcctgccccgaacctcggcgag
aagagcgcttcccatcccagccggtggatggagaagctgagcaaagagaagtccatcaaa
cacaagcggctcttgaggctcgaagccaagctttcgagggctggtttcgagacgaggttg
tctagggcaggggacaatgctgcccatggggaggagaaaggcctctctgaatgtcccacg
aaaggaaaaccagcccccagggaatccagagacggccttgatggtctcaagggcgccgca
gctccgggcggtcttggtgccgatccttcggaaggcggcgttgcctccaaagggctgccg
aagcaaacgccgaagcaggcaccgagcagggcgcccgccaaggagaagctgttcctggaa
gaggaaggaggaaaccgccacaggaacgtccaactcagtatcttggcctacttggactgc
tgcctgtttcttggccagacagagagagctcaccagtgcctgatgttctaccaccggtcc
cacgccaggaggaagctgctggacgtacagatgtacaatctgctcatgggcggatatgcc
aagaagcgcgccctgaaccacgtcggacagctcttccgtcagctggaggaggccggactg
aagcccaacctggactcttacgccgctgccctggagtgcatgggccgatccggtgcccac
ccacaagtcattgccaggtgcctccagcagctcaaggaagatggcctccgactagaagat
ctcctgagagactcccagcacaaggaggccgaaacgaagatggcgctgaaggccatccgg
agggtcatgccggacttccagcctccaccgcttgtccgcccggctgagatctgtaccgtt
cccctgttccgggacttctacacaaaggcggagcccgtttcttaccccaagctggatttc
acggcgcaagagctgcgggaacggtttcagcagcagcagcagctggaggcgtccaacgct
gtcaccatcgagtcagtggaggcggaaaagcccctgtcggagcaagccgtcagagcgcgg
gagctcctggctgcgctgcgttcccggtggcgggcagccctcctccagggcttccaggaa
tccaagctgcatctgcaccagaaacaatcagggcagctgaatttgtaccctttcctgtgc
gtgttgaaggatgaggaatatgtggacattttgatgcagggactctcccgcttcccgccg
cagggggaatcccttctgatcttggcaagagaactgggtaccaaagtctacaacaagtat
gtcatccagaagaaatccaggagctgtttggtgaagaacatccaaaggctctacgacagc
tacgtccagctgctggcgaaggacactccgcctgacaattacttgccccgggaatattgg
gaggagctagaagcaagggccggctacagcccttctctagtcaaccaggactgcgtctgg
ccccactcactgatggtgcagctgggcctccacctggtcgagttgctggtccaagtcctc
aagatggagagcaatcttctcaccccaagcctggagccgaaactcattcccatcctgtac
cacgtctattctttccgaagcggccgccagatcgggttcatcagacctcatccgctcctg
acccggctcttctcgaaggcttccgaaaccaccctcacctttgactccttcgtcatgccc
atgctgtgcccgccggtgccgtggatctctccttcctttggcgcctacctcctcagcccc
accaagctcatgcggtgcgtggacggggcggtgcagcaccagatgcttctagagcggtgt
ccccgcaacaacctcttttcggtcatggatgcgctcaaccagttgggcaactgcccgtgg
aaagtcaaccaggccgtcttgggcgtcgtgatctccattttcaacgacaaaggcgacgag
aagctggacgtcccgcccccgccttccgaagccccccagcctgcccggctgaccctcgga
ggggcccccctgaccaagtcagcttggaagcgggaggtggcccagtgccgcaagaaagcc
atggagacgttcagcctgcgcatggacaccctttacaaactgtccatagccaagcacatg
ggggaccgcgccttctggttcccccacaacatggacttccgcggaaggacctacccctgc
cccccccacttcaaccacctgggcaacgacctcacgcgggccatcctcctcttcgccgag
gggaagccactgggcccgcgcggccttgactggctgaagatccacctgatcaatctcacc
gggctcaagaagaagagctcactgcaagacaggctggcctacgccaacgagatcgtggag
gacgtcttagactcggcggatcacccactgacgggcaggaaatggtggatgaccgtcgat
gagccgtggcaggccttagcgtgttgcatggagatagccatggccacaagagccccggac
ccggctgcttacatctcccacttccccgtccatcaggacggttcttgcaatgggctgcag
cattatgcggccctcggacgggacgccattggcgcggcctcggttaacctgatgccgttt
gacgtgccccaggacgtttacagcggcgtggctcagcaggtggaggtgtttcggaaaaaa
gatgcagagaagggcacgaagatcgctcaagtcttggacggcttcatcgggcgcaaagtg
gtgaagcagacggtgatgacggtggtctacggggtcacccggtacgggggccgcctgcag
atcgagaaacgcctcaaggagatcgagggcttcccacaggagtacgtttgggaagcatct
cactacttggtccagatggtcttcaacagcctcaaggagatgttctccggcacccgggaa
atccagaattggctgaccgagagtgcccgccttatcgccaagtccgggcacgctgtggag
tgggtgactcccctcgggctgcccatcgtccagccgtaccatcgctcgaagatcatgctg
gtgaatagcaacattcagtcagtcaacctgaattcacgccacgatgtcagccagaaaccc
gacacagtgaagcagaaaaacgccttcccatgcttcatccattccttggactccacgcac
atgatgttgacggctctgcattgccacaggcgggggctgaccttcgtctccgtccatgat
tgctactggacccacgccctcactgtagacatcatgaaccaggtgtgccgagagcagttt
gtggaacttcacagccagcccatcctgcaggacctctccaagttcttgctcaagaaatac
tgtgcccgtttcccggctgagtggaggcaaaagaaaccccttgagttccagagactggtg
cagctgctgtctagtgttcccaagaaaggtgacttcgacctgcagaaagtgaaggaatcc
acctacttcttcagttga
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