Sphaerodactylus townsendi (Townsend's least gecko): 125434334
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Entry
125434334 CDS
T08213
Symbol
CNTN1
Name
(RefSeq) contactin-1 isoform X1
KO
K06759
contactin 1
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04514
Cell adhesion molecule (CAM) interaction
stow04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
125434334 (CNTN1)
04517 IgSF CAM signaling
125434334 (CNTN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stow04515
]
125434334 (CNTN1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
stow00537
]
125434334 (CNTN1)
Cell adhesion molecules [BR:
stow04515
]
Immunoglobulin superfamily
Contactins
125434334 (CNTN1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
stow00537
]
Others
125434334 (CNTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_VIN3
Ig_5
Interfer-bind
Ig_Rha78A_N
Motif
Other DBs
NCBI-GeneID:
125434334
NCBI-ProteinID:
XP_048355503
LinkDB
All DBs
Position
LG06:complement(67039281..67251683)
Genome browser
AA seq
1028 aa
AA seq
DB search
MKLQPLISYFVAICSFFFLAGLRCCSAVRHSVLDAFQGHRVHMQEELKGYGPIFEEQPID
TIYPEESSDGRVSMNCRARGIPAPIYKWKLNNWDIDITRGRHLMVGGNLEITNPEKSRDE
GIYVCIASNIHGIIRSREANLKFGYLNTFTPEERHEVKVREGVGAVLLCDPPRHYPDDLS
YRWVLNDFPEFITLDKRRFVSQTNGNLYIAKVEASDKGNYSCFVTSNSIAKSVFSSFIPL
IPQPDRTKGYLPDIRVKFKDTYALLGQNVTLECFALGNPVPEIRWSKYREPMPTTAEISV
SGAVLKIFNIQFEDEGTYECEAENHKGKDKHSANVYVQAMPEWVEHINDTERDLGSDLHW
ICTAAGKPIPTIRWLKNGLPYWKGELRLYDLKFDDAGMYQCVAENVHGIIYSNAELKVIV
LPPTFEFYPMKKKVLAARGGHAIIECKPRAAPRPRITWSRGTEILVNSTRMRIWYDGSLE
IINVTRTDGGNYTCFVENNKGKANGSSTLVVTDSTRIILAPTNVDVTVGYNATMQCLADH
DLTLDLTFIWTLNGYPIDVDKESDHYERSIMIKNNGELIVKNAQLRHAGRYTCVAQTIVD
NATASADLVVRGPPGPPGGLRIENIRNTSVVILWSRGTDNHSPISNYTIQSRTPFHDDWK
DTKTDPAIVEGNVESAKLIDLIPWMEYEFRIMATNTLGTGDPSIPSKKIRTEGAPPNVAP
SEVGGGGGRNRELTITWVPLPREYHFGHNFGYIVSFSPFNENSWKRVKVPQSDASRYVHK
DESMLPTSKYQARVRAFNNKGEGPDSITVSITSAEDAPTEQPKRVDVKVRSATEVTVIWQ
QVIQQIDGYEIRYWPANEKDVTANRVQVSNQNFSVRLENLKPDTRYAVRVFSFNSAGFSP
PSSQVYFTTQKAPPRQKPKITSYVKSGSKYIITWDHVRSDSNESDVKGYKVLYRPDGQYN
GTLVTTGKHYIEVPAPVKGQYVVEVRVHSDGGDGEVAQVKIPGAASGISSNYLGFLLPII
GILAYLEF
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgcagcctttaatcagttattttgttgcaatctgttccttcttttttctggca
gggctgaggtgctgcagtgctgtgcgacattctgtacttgatgcattccaagggcataga
gttcacatgcaagaggaattaaaaggatatgggccaatttttgaagagcaacccattgac
acaatctacccagaagagtcctcagatggaagagtttcaatgaattgcagagccagagga
atccctgctcccatttacaagtggaaactaaacaactgggatattgatattacaaggggg
cgccaccttatggtaggaggtaacttggaaatcactaaccctgagaaatcaagggatgaa
ggaatatatgtctgcatagcatccaacatacatggaatcatacggagtcgagaagcaaat
ctaaagtttggatatttaaatacatttactcccgaagagagacatgaggtaaaagttcgg
gaaggtgtgggtgcagtgcttctctgtgaccccccacgtcattatccagatgatctgagt
taccgttgggttctgaatgatttccctgaatttattactttggataaacgacgatttgtt
tctcagacaaatggcaacctctacatagcaaaagttgaagcatcagataagggcaactac
tcttgctttgtgaccagcaactcaatagctaagagtgtgttcagcagtttcattccactt
attccccaaccagatcgtacgaaaggttatctgccagatatcagagtgaagttcaaagat
acctatgcacttctagggcagaatgtgacactagagtgttttgcacttggaaatcctgtt
cctgagattagatggtctaagtatcgtgaacccatgccaaccactgctgagataagtgtg
tctggtgcagttctcaagattttcaatattcagtttgaagatgaagggacttatgaatgt
gaagctgaaaatcacaaaggaaaggataaacattcagcaaatgtttatgttcaagcgatg
ccagaatgggtagaacatatcaatgacacagagagagatttgggaagtgatttacactgg
atttgtacagctgctggcaagccgattccaacaatccggtggttgaaaaatggattaccg
tactggaaaggagaactgagactttatgatctgaagtttgatgatgctgggatgtatcag
tgtgtagcagaaaatgtacatggaatcatctattcaaatgctgaactgaaagttatagtt
ttacctcctacatttgaattctatcccatgaagaaaaaagtcttagctgctaggggaggt
cacgctataattgagtgcaagcctagagctgcccctaggccaaggatcacatggagcaga
gggacagaaattcttgtaaactccacccggatgcgtatttggtatgatggaagtctggaa
attattaatgtcacaaggactgatggaggcaattatacatgttttgtagaaaacaacaaa
ggaaaagctaatggttcctctactcttgtagtcacagattctacaaggattattttagca
ccgactaatgttgatgtcactgttggatacaatgctaccatgcagtgtctggcagaccat
gatctcactttggacctgactttcatttggacacttaatggatacccaatagatgttgat
aaagagagtgatcattatgaaaggagcatcatgataaagaacaatggtgaacttatagta
aaaaatgcacaactgcgacatgctggaagatatacatgtgttgctcagacaattgttgat
aatgccacagcttcagctgatcttgttgtgagaggacctccaggacctccaggaggactc
agaattgaaaatattagaaacacatctgtagttattctgtggagccggggaacagacaat
cacagtcctatttcaaattacactatccagtcaagaaccccttttcatgatgattggaag
gataccaaaacagatccagcaatagttgaaggaaatgtggagtcagccaagttgattgat
ttaattccatggatggaatatgaatttcggataatggctactaatactttagggacagga
gaccctagtataccatcaaagaaaattaggacagagggagctcctcccaatgtggctcct
tctgaagttggaggagggggtggcagaaatcgagaactgactataacatgggtgcctttg
ccaagagagtatcactttggtcataattttggatatatcgtatcattttcacctttcaac
gaaaactcttggaagagagttaaagttcctcagtcagatgctagtcgatatgtccacaag
gatgaatcgatgctccctacctcaaagtatcaagcaagagtgagagcatttaataacaaa
ggggaaggacctgatagtatcactgtttccattacctcagcagaagatgctcccaccgag
caaccaaaaagagtggatgtaaaagtcagatcagccactgaagtcactgttatttggcag
caggttatccagcagattgatggatatgagatccgctactggcctgctaatgaaaaagat
gtgactgcaaacagagtacaagtgagcaatcagaatttctcagtgaggctggaaaacctg
aagcctgacacacgatatgccgtgagagtgttttcctttaacagtgcaggctttagccct
cccagtagtcaagtatacttcacaacacaaaaagcacctccaagacaaaaaccaaaaatt
accagttatgtaaaatctggttcaaaatacatcatcacctgggaccatgtcaggtcagat
tctaatgaatcggatgtgaaaggatataaagtgctttatagaccggatggccagtataat
ggtacactggttacaactggtaagcattatatagaggttcctgctcctgttaagggtcaa
tatgttgttgaagttcgagtgcacagtgatggaggtgatggagaagtagctcaagtaaaa
attccaggagctgcttctggaatatcatctaattatcttggttttttgctgcctatcatt
ggcatccttgcctatttggaattctga
DBGET
integrated database retrieval system
