Sphaerodactylus townsendi (Townsend's least gecko): 125443784
Help
Entry
125443784 CDS
T08213
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1-like isoform X1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
125443784
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stow04040
]
125443784
Ion channels [BR:
stow04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
125443784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
125443784
NCBI-ProteinID:
XP_048372054
LinkDB
All DBs
Position
LG14:28439084..28473951
Genome browser
AA seq
849 aa
AA seq
DB search
MSKQNRDLELVHLMQDKALDLQNSTLSYQGIAEQLPNVPMASSRIPVLASRKQKAGVVNP
SFVKEEASLSRSLGLQATKYPTVNTKTVKIKNGSSGLPRLIRSTRPISQKKSRKKSQTLT
VPATPTAIKRKKLHSQEDSVGEIGVASPRHSPVNVDEFQEPSRYPSPVIVDELQVPSSYQ
SPVKAWPDQSSPQSEDLPKRGSSTTSQSSDVINDRLQELVRLFKDRTEKVKEKLVDPDAS
SDEETPVPSPSNEKPPEEKKEETEKEEQTGKPKRRCLKTCQFPRNIDPLTNLTYILWLFI
VVLAWNWNCWLIPVRWAFPYQTPENVYYWMIMDYVCDLIYILDISVFQVRLQFVERGDII
TDKKAMRQNYLKSRRFKMDLICLLPLDFLYFKVGINSLLRLPRCLKYMAFFEFNNRLESI
LSKAYVYRVIRITAYLLFSLHVNSCLYYWASSINGLGSTPWAYDGEGNSYLRCYYWAVKT
LITIGGLPDPYTLFEIIFQLLNYFTGVFAFSVMIGQMRDVVGAATAGQTYYRNCMDSTVK
YMAFYKIPRSVQNRVKKWYEYTWHSQGMLDESELLRQLPEMMRLDIAVDVNYDIVSKVPL
FQGCDRQMIFDMLKRLRSVVYLPNDYVCKKGEIGREMYIIQAGQVQVLGGPDGKTILVTL
KAGSVFGEISLLAVGGGNRRTANVVAHGFTNLFILDKKDLNDILVHYPESQKLLRKKARR
MLKNNSKPKEEKGMLKDVLIIPPKAGTPRLFQAALMAAGKMGGKGRLAHIRWKLKELKAL
QAASSSPIAPKSPASHSSPAGSRKSDDLRSEKAAVMSPVPSVLIRVTPAPGDDQQTLSVE
NEVKEENNK
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacaaaaccgagacctggagttagttcacctgatgcaggacaaagcacttgat
cttcaaaactccaccctttcctaccaaggcatagccgagcagttacccaatgttcccatg
gcttcatctcgcatccctgtccttgcctccagaaagcagaaggctggtgtggtgaatccc
agctttgtgaaggaagaagcatctctttctcgcagcttaggactacaggcaaccaagtac
cctactgtgaacaccaagactgtaaaaattaaaaatggctcttcggggctgcccaggctt
atccgaagcactcgtcccatttcccaaaagaaatcccgaaagaaatcccaaaccctcaca
gttccagctacacccaccgccatcaagagaaaaaagctgcactcccaagaggacagtgtg
ggagaaattggagtagcatctccacgccattctccggtcaatgtggatgaatttcaagaa
ccatctcggtatccgtctccagtcattgtagatgaacttcaagtaccatcttcatatcag
tctccggtcaaagcttggccagaccaatccagtccgcagtcagaagacttgcccaaacgc
ggtagctcaacgaccagccagagcagtgatgtgatcaacgatcgccttcaggaactggtg
cggctttttaaggaccggacagagaaagtgaaagagaagctggttgacccagatgcctct
tctgatgaagagacgcctgtgccctcaccttccaatgaaaagcctccagaagaaaagaaa
gaagaaactgagaaagaggagcagactggcaaaccaaagcggcgttgcttgaaaacatgc
cagttcccccgcaatattgatcctctcaccaatctgacctatatcttgtggctcttcatt
gtggttctggcatggaattggaactgttggttgattccagtccgctgggctttcccatac
cagactcctgaaaatgtctactactggatgattatggactacgtctgtgacctcatctac
attttggacatctccgtctttcaagtccgcctacagtttgttgaaagaggcgacattatt
actgataaaaaggccatgagacagaattacctaaagtccaggcgcttcaagatggacctc
atctgccttctgccattggatttcctctacttcaaagtgggcataaattccctcttgcgt
ttacctcgctgcttaaagtatatggctttctttgagttcaacaaccggcttgaatctatt
ctgagcaaggcctatgtttacagagtaatcagaatcacggcctacctgctattcagcttg
catgtaaactcttgcctgtattactgggcatcatccatcaatggattgggatctaccccg
tgggcctatgatggagaaggaaacagttacctccgctgttactactgggctgtcaagacc
ttaataacaattggagggctgccggacccctacaccctctttgagatcatctttcagctc
ctcaattacttcacaggggtctttgctttctcggtgatgattggtcagatgcgagatgtc
gtgggtgctgccactgctggacaaacatactatcggaactgcatggatagcacagtgaag
tatatggctttctacaaaattccccgctctgtccagaatagggtcaaaaagtggtatgaa
tatacttggcactctcaaggcatgctggacgagtcagagctgctgaggcaattgccggaa
atgatgcggctggacatcgctgtcgacgtgaactatgatatagtgagcaaggtgccactc
tttcagggttgtgaccgacaaatgatttttgacatgttaaagaggctcagatctgttgtt
tacttgccaaatgactacgtatgcaagaagggagaaattggccgagagatgtacatcatt
caagctggacaagtccaggtattgggaggacctgatgggaagacgatccttgtgaccttg
aaagctggatcagtatttggagaaataagcttgctggctgtaggaggtggaaatcgccgc
acagccaatgttgtggctcatggatttacgaatcttttcattttggacaagaaagatttg
aatgacattttggtgcattacccagagtctcagaagctgctgcggaagaaggccaggcga
atgctgaagaataacagtaaacccaaagaagaaaaagggatgctaaaagacgtgctgatc
attcctccaaaagctgggactccaagactctttcaagcagccctcatggcagcaggaaag
atggggggcaagggacggttggctcacatccgatggaaactgaaagaactgaaggcgttg
caggctgccagttcctctcccatcgcaccaaaatcaccggccagtcatagttcaccagct
ggttcaaggaaatcagatgatctcagaagtgagaaggctgcggtgatgtctcctgtcccc
tccgttctcattcgtgtgactccggcacctggggatgatcaacagacgctctctgtagaa
aatgaagtcaaagaagaaaacaacaagtag
DBGET
integrated database retrieval system
