Scyliorhinus torazame (cloudy catshark): 140387432
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Entry
140387432 CDS
T11303
Name
(RefSeq) LOW QUALITY PROTEIN: aggrecan core protein-like
Organism
stoz Scyliorhinus torazame (cloudy catshark)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
Lectin_C
V-set
EGF
Sushi
EGF_TEN
hEGF
EGF_CA
EGF_3
Ig_3
I-set
cEGF
Motif
Other DBs
NCBI-GeneID:
140387432
NCBI-ProteinID:
XP_072326633
LinkDB
All DBs
Position
12:23129504..23272917
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AA seq
1861 aa
AA seq
DB search
MTTLLLVFVCLRVIAAAISIEISDNTKALSVKIAAQSPVKAVLASSVTIPCYFINTTPLS
PDTPLATLLAPRIKWTKITEGGKETVIVVATSGKVKISHEYQGRVMLPSYHEIPSDATLE
LDKLQSSDSGMYRCEVMHGIEDSQDVIELVVKGVVFHYRAISSRYTLNFYKAQQACIDNT
ATIATPGQLQAAYDDGFDQCDAGWLADQTVRYPIHNPRVGCYGNLDEYPGVRSYGLRDTN
ETYDVYCFAKELQGNVFYITTTGRYAFKEAMEACYDKGAQLATTGQLYMAWKDGMDQCNT
GWLADASVRYPISKRRPNCGGNLLGVRTVYRYPNQTCYPDPITRHDAYCFSASTDIEAFT
ETPLTYPATEPEELFTDEGSAFTVQTITERVEQFFTKVSREKEAKADIITLGPFTPVTLP
FTEETPGVTGFPEVLTPETGSIPTSEEPVLSISQETLAHKITDLPENITLSEELTTSGIV
SAVTAAISQTEVTVSEVATVVVSVPVEEGTATARLEEVTATPQETLATIEEVITAATAAP
VVLATMPEELTTAPQETGTPGTEAITQISTEEEGSATIEPIFPISPITPTGIVFHYRAIS
SRYTLNFTEAQISCLENSAIIATPQQLQAAYEQGYNQCDAGWLSDQTVRYPIVNPRERCF
GDKDGFPGVRSYGVRKPEETYDVYCYIDCLNGKVFHATVADGFTYDEAVDYCLSHNAKMA
TTGQLYAAWKQGMDKCRAGWLSDGSVRYPIQNPRSSCGRGRAGVRTVYLHVDQTGYPDPE
SRFDVYCFRETLVPVITEEPEVEKLTVPVILVERVSPTPDIELDVKTTVRPEEAEKGRTE
TFVVDTTGQPNVTSGLIEETIATQVAPVLEILPPERTTVSLVSGPTTEAIPDKYLTTAEK
FFATVTPTLEPGFADVTPLTEIDTSAEPSEEPFVSGEPSGEPVSSGEPSGEPVVSGEPSG
ETVSSGEPSGDHFESGEASGEPVISGEPSGESSGETVASGETSGEPSVSGEQSGDAVTSG
EPSGEPSGEPSGEPSGEPVTSGEPSGEPVTSGEPSGEPISSGEPSGEPSGEPVTSGEPSG
EPITSGEPSGEPITSGEPSGEPFTSGEPSGEPLTSGEPSGEPFTSGEPSGEPFTSGEPSG
EPISSGEPSGEPSGEPVTSGEPSGEPITSGEPSGEPITSGEPSGEPLTSGEPSGEPFTSG
EPSGEPVTSGEPSGEPVSSGEASGERVTSGEPSGEPVSSGEPSGEPVSSGEPSGESVTSG
EPSGEFVSSGEPSGEPVSSGEPSGEFVSSGEPSGEPYSSGEASGIPDASGLPSGIPKISV
EPSEIQVILITPEDKEYPTIPSIFVEAGEGPIDEQISGVPISSGDLEANGKPYDSSGEPS
GAPDGSGEPFGLPQIVIATSRIIDTSKEPSGIPEGSGELSGVTEVAEEPSGVHEVSDDLS
GLLQISKELSGAPDVSELPATLLPLIPNVSGDFSLPDVVVSTAPTQLEITRVETKVPEEA
EREGDEVSSVSIDSAASGQTEVSIEPKSVGVLTVTSAAPVVLTTVPPQISPDVVTIVAEP
VIAEVVPGPCQGNLCGSGTCVLRDGSFACECPAGFMGEHCEIDIDECHSSPCLNGATCID
GIDSFKCLCLPSYGGDLCEVDVEQCEDGWAKFQGHCYKHFVDRQTWESAEHQCREHKAHL
ASIITPEEQEFVNNHAQDYQWIGLNDKTIEGDFHWSDASPLLYENWRPNQPDSFFNSGED
CVVMIWHESGQWNDVPCNYHLPYTCKKGTVACGQPPVVDNAKTFGKKRERFEINSLVRYQ
CKNGYLQRHFPNIKCKPDGHWEQPRIMCIDTATYNRRPLKRVDTSRPHPQSESNASHGSY
P
NT seq
5586 nt
NT seq
+upstream
nt +downstream
nt
atgaccactctacttttagtgtttgtatgtttgcgagtgatcgcagcggctatttccatc
gaaatttctgataacactaaggcattgagcgtgaagattgccgcgcagtcgccagtgaag
gctgttcttgcgagctctgtgactatcccctgctactttatcaacaccacgccactctca
ccggacactcccttagcaaccctgctggccccaagaatcaaatggaccaaaatcaccgaa
ggagggaaagagaccgtcattgtggttgccacttctggaaaagttaagatcagccacgag
taccaaggtcgagtcatgcttccaagctaccatgaaatcccaagtgacgccaccttggag
ttggataaactacaatcaagtgattcaggaatgtaccgctgtgaggtgatgcatggtatt
gaggacagccaggatgttatcgagctggttgtcaaaggtgttgtcttccattaccgtgcc
atttccagcaggtacaccctcaacttctacaaagcccagcaggcttgtattgacaacact
gccaccatcgcaaccccagggcaactgcaggcagcttatgatgatggatttgatcagtgt
gatgctggatggttagccgatcaaacagtaaggtatccaattcacaatccacgagtggga
tgctatggtaatttggatgaatacccaggtgtcagatcgtatggtcttcgagatacaaat
gaaacctatgacgtttattgttttgcaaaagaattacaaggtaacgtcttctacataact
accactggaagatatgcgtttaaggaagcaatggaagcttgctatgacaaaggtgcccag
ttagccaccactgggcaattgtacatggcatggaaagatggcatggatcagtgcaatact
ggctggcttgctgatgccagtgtcagatacccaatctcgaagcgacgacccaactgtggt
ggtaacctactaggtgtaagaactgtgtaccggtacccgaaccaaacttgttaccctgat
ccgatcactcgacatgatgcctactgcttcagtgcaagtactgatatagaagcattcacg
gagacgccattaacctacccagccacggagccagaagagttatttactgacgaaggaagt
gcctttactgttcaaactattactgaaagggtagagcagttcttcacaaaagtcagcaga
gagaaagaagcaaaggctgacattatcacacttggtccttttactccagtaactcttcca
ttcactgaggagacacctggggtgaccggatttccagaggttctcaccccagagactggc
agcattccaacttctgaggaacctgttctgtccattagccaggaaacacttgctcataaa
attacggacctacctgaaaacataacactgagtgaagaattgaccacctctggaatcgta
tcggctgttactgcagccatctcccaaacagaagtcacggtttccgaagtcgcaactgtt
gtggtgtctgtacctgtcgaagaagggacagcgactgcgaggcttgaggaagtcacggcg
actccacaggagactctcgccaccattgaggaggttattactgctgcaacagcagctcct
gttgtccttgcgacgatgcccgaggagctaacaacagctccacaagaaacaggtaccccg
ggcacagaggccatcacccaaatatcgactgaagaggaaggaagtgcaacaatagaacca
atatttcccatcagcccaatcaccccaactgggattgttttccattaccgtgctatttcg
agcagatacactctcaacttcactgaggcccaaatttcctgcttagaaaatagtgccatc
atcgccacccctcagcagcttcaagcagcctatgaacaagggtacaaccagtgcgatgcc
ggctggctctctgaccagactgtcaggtacccaatagtgaaccctagagaacgctgtttt
ggtgacaaagatggcttccctggtgtaagaagttatggtgtccgcaaaccagaggaaaca
tatgatgtttactgctacatcgactgtctcaatgggaaggtattccatgcgactgtggca
gatgggtttacctatgatgaagcagttgactattgcctcagccacaatgctaagatggcc
accaccggccagctgtatgcagcctggaaacagggcatggacaagtgtcgggcaggttgg
ctatcagatggcagcgttagataccctatccaaaatcccaggtcatcctgtggtaggggg
cgtgctggagtgaggacagtctacctgcacgtggatcagactggataccctgatcccgag
tcacgcttcgacgtctattgctttagagaaaccctcgttcccgtgattactgaagagcca
gaggttgagaaactaacagtacctgtgattctagtggagagagtgtcaccaacccctgat
attgagcttgatgtaaaaacgacagtgaggccagaagaagctgaaaagggaaggactgag
acctttgttgtggacactacagggcagcccaacgttacatctggcttgattgaagagact
atagcaacgcaggtggcaccagtgctggagatattgccacctgaacggactacagtatct
ttggtttctgggcctaccactgaagccatcccagataaatatctcacgacggctgagaaa
ttctttgcgacagtaacccccacacttgaacccgggtttgcagacgtaacgcctctgacg
gaaattgatacaagtgccgaaccttctgaagaaccttttgttagtggggaaccttccgga
gaacctgtttctagtggggaaccttctggagaaccagttgtaagtggagaaccttctggg
gagaccgttagtagtggggaaccttctggagaccattttgaaagtggtgaagcctctggt
gaacctgtcattagtggagaaccttctggagaatcttctggagaaactgttgctagtgga
gaaacctctggagaaccttcagttagtggagaacaatctggagatgctgttaccagtggg
gaaccttctggagaaccttctggagaaccttctggagaaccttctggagaacctgtaact
agtggagaaccttctggagaacctgttaccagtggagaaccttctggagaacctatttcc
agtggtgaaccttctggagaaccttctggagaacctgtaactagtggagaaccttctgga
gaacccattaccagtggagaaccttctggagaacccattaccagtggagaaccttctgga
gaaccttttaccagtggagaaccttctggagaacctcttaccagtggagaaccttctgga
gaaccttttaccagtggagaaccttctggagaaccttttaccagtggagaaccttctgga
gaacctatttccagtggtgaaccttctggagaaccttctggagaacctgtaactagtgga
gaaccttctggagaacccattaccagtggagaaccttctggagaacccattaccagtgga
gaaccttctggagaacctcttaccagtggagaaccttctggagaaccttttaccagtgga
gaaccttctggagaacctgttaccagtggagaaccttctggagaacctgtttccagtgga
gaagcttctggagaacgtgttaccagtggggaaccttctggagaacctgtttccagtgga
gaaccttctggagaacctgtttccagtggggaaccttctggagaatctgttaccagtgga
gaaccttctggggaatttgtttccagtggagaaccttctggagaacctgtttccagtgga
gaaccttctggggaatttgtttccagtggagaaccttctggagaaccatattccagtgga
gaagcttctggaatacctgatgccagtggattaccatctggaataccaaagatcagtgtg
gaaccatctgaaatacaggtaatcctgattactccagaagataaagaatatccaacaatc
ccgtctatttttgtagaagcaggtgaaggacccattgatgagcaaatttcaggggttcca
atttctagtggggatttggaagccaatggaaaaccctacgacagtagtggagaaccctct
ggagctcctgatggtagtggggaaccttttggattaccccaaattgttattgcaacttcc
agaattattgacacaagtaaggaaccttctggcattcctgaaggtagtggagaactttcc
ggagttacagaagttgctgaagaaccttcaggagtccatgaagttagcgacgatctttca
ggattgcttcaaattagcaaagaactgtctggtgctcctgacgttagtgaacttcctgca
acacttttgcctctaattccaaatgtttctggagacttttcattacctgatgtggtagtg
agcactgcaccaacgcagcttgagataacccgggtggaaacaaaagtgcctgaggaagct
gaacgtgaaggcgatgaggtttcttcagtgtccatagacagtgcagcatctggccaaaca
gaagtgtcaattgagcccaagagtgtaggggtcctgacggtgacgtccgctgccccagta
gtactcacaactgttccacctcaaatctcgccagacgttgtgacaattgtggctgaaccg
gtgatagcagaagttgtccctggtccgtgtcaaggcaatctctgtggcagtggaacatgt
gtactgagggatggcagctttgcttgtgaatgcccagctggattcatgggagagcattgc
gagatagacattgacgagtgccactcgagcccttgtctgaatggagctacatgtatcgat
ggcatcgactctttcaaatgcttgtgcctacccagctatggaggggacctctgtgaagtt
gatgtggaacagtgcgaagatggttgggctaagtttcagggtcactgctacaagcacttt
gttgaccgacagacatgggaatccgcagagcatcaatgcagggaacacaaagctcacttg
gccagtattatcactccagaggaacaagagtttgttaacaatcatgcccaggattatcaa
tggatcggacttaacgacaagacaatagagggggatttccattggtccgatgccagccca
ctgttgtacgagaattggcgacccaatcaacccgacagtttcttcaacagtggcgaagat
tgtgttgtcatgatatggcatgaaagcggccagtggaatgatgtcccgtgtaattatcat
ctgccttacacgtgcaagaaggggacagttgcttgtggtcaacctccggtagtagataat
gccaaaacctttggcaaaaagagagaacgttttgaaattaactccttggtgcgttatcag
tgtaaaaatggctacttacagcgccattttcccaacatcaagtgtaagccagatgggcat
tgggagcagccaaggataatgtgcatagacactgccacatataaccgcaggcctctgaag
agggttgatacaagtaggccgcatcctcaatctgaatcgaatgcttcacacggctcttac
ccttaa
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