Scyliorhinus torazame (cloudy catshark): 140388447
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Entry
140388447 CDS
T11303
Symbol
slc6a11b
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Pathway
stoz04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
140388447 (slc6a11b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
stoz02000
]
140388447 (slc6a11b)
Transporters [BR:
stoz02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
140388447 (slc6a11b)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
140388447
NCBI-ProteinID:
XP_072328697
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Position
13:complement(188290120..188499442)
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AA seq
622 aa
AA seq
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MTADKAIPAINGKPEDAMDTEASNVNLVRTNDKKVTDRGQWNNKIEFVLSVAGEIIGLGN
VWRFPYLCYKNGGGAFLVPYVIFFIGCGIPVFFLETALGQYTSEGGITCWRKVCPLFEGI
GYATQVIEAHLNVFYIIVLAWAIFYLFNCFTTELPWATCGHDWNTKNCVEFQKLNSTNCS
HTALPNATSPVIEFWERRVLGLSSGIDHIGSIRWELALCLLAAWIICYFCIWKGPKSTGK
VVYVTATFPYLMLLVLLIRGVTLPGAGEGIRFYLYPDISRLSDPQVWLDAGTQIFFSYAI
CLGCLTALGSYNPYHNNCYRDCIMLCCLNSGTSFVAGFAIFSVLGFMAYEQGVPIAEVAE
SGPGLTFIAYPKAVTMMPLAPLWAVLFFLMLIFLGLDSQFVCMESLVTAIIDMYPKIFRT
GYRREQLICIIAIASYLVGLIMVTEGGMYVFQLFDAYASSGMCLLFVAIFECICIGWAYG
SDRFYDNIEDMIGYRPLILFKWCWNFITPGICSAIFIFFIVRYKPLKYNNTYTYPDWGYA
LGWALALSSMVCIPLGFIFKLWTTEGTFLERIKKLTTPSPDLRRRGIGPSNADTCCSIIN
ECDGKLKGDGRIPTITEKETHF
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacagcggacaaagcgatcccggccatcaatggcaagccagaagatgcgatggacacc
gaggcttccaatgtcaatttagtccgcaccaacgacaagaaagtgacagataggggccag
tggaataacaagatcgagtttgtcttgtctgtggcgggggagatcattggattaggaaac
gtgtggcggttcccctacctctgttacaagaacggaggcggggcctttcttgtaccttac
gtgatatttttcatcggctgtgggataccggtgtttttcctggagactgcactgggccag
tacaccagcgagggagggattacgtgttggaggaaagtttgcccgctctttgaaggtatc
ggatatgcaacccaggtgattgaggcgcatttgaatgtgttttacatcattgtactggcg
tgggccatattctacctgttcaattgcttcaccactgaacttccctgggctacctgcgga
catgactggaacacaaaaaactgtgtcgagtttcagaagctgaattccaccaattgcagt
catacagctctaccaaatgcaacctcgcctgtcattgagttctgggaacgtagagtgctt
ggattatcaagtgggattgaccatattggaagtatacgatgggaactggctctatgtctt
cttgccgcttggattatctgttatttctgcatttggaagggaccaaagtccactggaaag
gtggtgtatgtaacagcaacgttcccctacctgatgctgctggttttattgattcgagga
gtgactcttcccggagctggagagggaataaggttttatctttacccggatatctcccgc
ttatcggaccctcaggtctggctggatgctggtacccagattttcttctcgtatgccatt
tgccttggttgcttgactgcgttaggaagctataatccctatcataacaactgctacagg
gattgcataatgctatgctgcctgaacagtggcaccagctttgttgctggttttgctatt
ttctctgtgttgggattcatggcttacgaacaaggagtgccgatagcagaagtggccgaa
tcaggtcctgggttgacattcattgcttatccgaaggctgtcactatgatgcctcttgca
ccattatgggctgttctattcttcttgatgctcattttccttggactggacagtcagttt
gtctgtatggaaagtctggtgacagctataatagacatgtatccaaagatattccgcaca
ggatacagaagagagcagttaatttgcattatcgcaattgcgtcttacctggttggatta
ataatggtaacagagggaggaatgtacgtcttccagctcttcgatgcatacgcttcgagt
ggcatgtgtcttctcttcgttgccattttcgagtgtatttgtataggctgggcctatgga
agtgatcggttctacgataatattgaagacatgattgggtacagaccattaattctattt
aaatggtgctggaatttcatcactcccggcatatgttcagcgattttcattttcttcatt
gtgaggtataaaccacttaagtataacaacacgtacacctatccagactggggttatgcg
ctagggtgggccctggccctttcttccatggtttgcatacctcttggatttatcttcaaa
ttatggacgactgaaggaacctttctagagagaattaagaagcttacaacaccgagtcca
gacttgcggcgaagaggaatcggaccgtccaatgcagacacgtgctgcagcataattaat
gaatgtgatggtaaacttaaaggcgatggacgtattcctaccatcacagaaaaagagacg
cacttctga
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