Scyliorhinus torazame (cloudy catshark): 140393192
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Entry
140393192 CDS
T11303
Symbol
tial1
Name
(RefSeq) nucleolysin TIAR isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stoz03019
]
140393192 (tial1)
03041 Spliceosome [BR:
stoz03041
]
140393192 (tial1)
Messenger RNA biogenesis [BR:
stoz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
140393192 (tial1)
Spliceosome [BR:
stoz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
140393192 (tial1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Nup35_RRM_2
RRM_Nup35
RBD_AKAP-17A
Calcipressin
Tmrp11_N
Motif
Other DBs
NCBI-GeneID:
140393192
NCBI-ProteinID:
XP_072335453
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Position
16:162745133..162790101
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AA seq
390 aa
AA seq
DB search
MEDDSYPRTLYVGNLSRDVTEALILQLFSQIGPCKSCKMITEQTASRRVNSSVGFSVLQH
SSNDPYCFVEFYEHRDAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTTNHFHVFVGDL
SPEITTEDLKSAFAPFGRISDARVVKDLATGKSKGYGFVSFYSKLDAENAIVHMGGQWLG
GRQIRTNWATRKPPAPKSAPESSSKHLKFEEVVNQSSSTNCTVYCGGIASGLTEQLMRQT
FSPFGQIMEIRVFPEKGYSFVRFATHDSAAHAIVSVNGTTIEGHIVKCYWGKETTDSANK
YQQMEFAQPWGQWGQWYGNAQQYGQYVANGWQVPSYGMYGQAWNQQGFGVDQPQSAAAWV
GGFSAQPAQGQGTAVIPNQAGFGMAGYQTQ
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgattcgtacccgcgcaccctctacgtaggcaacctctccagagatgtgaca
gaagcccttatacttcaactttttagtcagattggcccatgcaaaagttgtaaaatgatt
accgagcaaaccgcaagcagaagggtgaactcttctgttggattttctgttttgcagcat
tccagcaatgacccgtattgctttgtggaattctacgagcatagggatgcagcagctgca
ttggctgcaatgaatggccgtaaaataatgggtaaggaagtcaaagtaaactgggcaaca
acaccaagtagccagaagaaagatacaaccaatcattttcatgtgtttgttggtgactta
agccctgagataaccactgaggatctaaaatctgcatttgcgccctttggtagaatatcg
gatgctcgtgttgtaaaagacttggcaacagggaaatctaaaggctatggatttgtatct
ttctacagtaaactggacgcagaaaatgcaattgtgcacatgggtggtcaatggctggga
ggccgacaaattcgaacaaactgggcaacgcgcaagccaccagctccaaagagtgcacca
gagagtagttcgaaacatctaaaatttgaagaagttgtcaatcagtctagttccacaaat
tgtactgtctattgtggaggtattgcttcaggcctaacagagcagcttatgcgtcaaact
ttctctccatttgggcaaatcatggaaattcgagttttcccagaaaagggttactcattc
gttaggtttgcaacacatgatagtgctgctcatgctatagtgtcagttaatggaaccact
attgaaggccatattgttaaatgctattggggtaaagaaactactgattcggccaacaag
tatcagcagatggaatttgcccagccctggggtcaatggggccagtggtatggcaatgct
caacagtatggtcagtatgtagccaatggttggcaggtgccctcttacggcatgtatggc
caagcgtggaatcagcaaggatttggagtagatcaacctcaatctgcagctgcctgggta
ggtggatttagtgctcagccagcccaagggcagggtacagctgttatacctaaccaagcc
ggctttgggatggcaggttaccagacgcaatga
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