Scyliorhinus torazame (cloudy catshark): 140396984
Help
Entry
140396984 CDS
T11303
Symbol
tia1
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stoz03019
]
140396984 (tia1)
03041 Spliceosome [BR:
stoz03041
]
140396984 (tia1)
Messenger RNA biogenesis [BR:
stoz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
140396984 (tia1)
Spliceosome [BR:
stoz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
140396984 (tia1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Nup35_RRM_2
Calcipressin
Motif
Other DBs
NCBI-GeneID:
140396984
NCBI-ProteinID:
XP_072342095
LinkDB
All DBs
Position
20:complement(24807942..24872747)
Genome browser
AA seq
378 aa
AA seq
DB search
MMMEDDGQPRTLYVGNLSRDVTEALILQLFSQIGPCKSCKMIVETGNDPYCFVEFYEHRH
AAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPF
GRISDARVVKDLATGKSKGYGFVSFYNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAP
KSTSEPSTKQLSYEEVVNQSSPSNCTVYCGGIAVGLTEQLMRQTFSPFGQIMEIRVFPEK
GYSFVRFSSHESAAHAIVSVNGTTIEGHIVKCYWGKETPDGMSQFQQPSQMGYAQPWSQF
GQWYGNTQQFSQYMPNGWQMPPYGVYGQAWNQQGFRMDQTPSTAAWMGANYGVQPAQAQN
PSVITNQAGFGMAGYQTQ
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggaggacgacgggcagccgagaaccctctatgtgggaaatctctccagagat
gtgacggaagccctcattcttcaactcttcagtcagattggaccatgcaaaagctgtaaa
atgatcgttgagactggcaacgatccatattgctttgtggagttctacgagcaccgacat
gcagcagcagcattagcagctatgaatggacggaaaattatgggtaaggaagtcaaagtg
aactgggccacaactccaagcagccagaagaaagacacgagtaatcacttccacgtattt
gttggcgacttgagcccagaaatcaccacagaagatataaaagcagcttttgcaccattt
ggaagaatatccgatgctagagtggtcaaagatttggcaacagggaaatccaaagggtat
ggctttgtgtccttctacaacaagtgggacgccgaaaatgccattcaacagatgggaggc
cagtggcttgggggaaggcagatccgaacaaactgggctactcgcaagcctcctgcccca
aagagtacttcagagccgagcaccaaacagctctcctatgaggaagttgtcaaccagtcc
agtcccagcaactgcactgtttactgcggtggcatagcggttggacttacagagcaactc
atgcgccagacgttttcaccctttggacagattatggagatcagagtgtttcctgagaaa
ggatattcatttgtacgtttttcatcgcacgaaagtgctgcacacgctattgtgtcagtc
aatggaaccaccatagaaggacacattgtcaaatgctactgggggaaagaaacgcctgac
ggaatgagtcaatttcagcagccaagtcagatgggctacgctcagccttggagccagttt
gggcagtggtatgggaatacgcagcagttcagccagtacatgcccaatggctggcaaatg
ccaccctatggagtttacgggcaagcttggaaccaacaaggattcagaatggatcaaaca
ccgtccaccgctgcgtggatgggcgccaactatggagtgcagcctgcgcaagctcaaaac
cccagtgtgataaccaaccaagcaggattcggcatggcaggctaccagacccagtga
DBGET
integrated database retrieval system
