Scyliorhinus torazame (cloudy catshark): 140398799
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Entry
140398799 CDS
T11303
Name
(RefSeq) tubulin alpha chain-like
KO
K07374
tubulin alpha
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Pathway
stoz04145
Phagosome
stoz04210
Apoptosis
stoz04517
IgSF CAM signaling
stoz04530
Tight junction
stoz04540
Gap junction
stoz04814
Motor proteins
stoz05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
140398799
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
140398799
09143 Cell growth and death
04210 Apoptosis
140398799
09144 Cellular community - eukaryotes
04530 Tight junction
140398799
04540 Gap junction
140398799
09142 Cell motility
04814 Motor proteins
140398799
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
140398799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stoz03019
]
140398799
03036 Chromosome and associated proteins [BR:
stoz03036
]
140398799
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
stoz04812
]
140398799
04147 Exosome [BR:
stoz04147
]
140398799
Messenger RNA biogenesis [BR:
stoz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
140398799
Chromosome and associated proteins [BR:
stoz03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
140398799
Cytoskeleton proteins [BR:
stoz04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
140398799
Exosome [BR:
stoz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
140398799
Exosomal proteins of other body fluids (saliva and urine)
140398799
Exosomal proteins of colorectal cancer cells
140398799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin_C
Tubulin
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
140398799
NCBI-ProteinID:
XP_072343866
LinkDB
All DBs
Position
22:complement(36112368..36116413)
Genome browser
AA seq
415 aa
AA seq
DB search
MPSDKTIGGGDDSFNTFFSETGAGKHIPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITG
KEDAANNYARGHCSIGKEIVDLVLDRIRKVADQCTGLQGFLIFHSFGGGTGSGFTSLLME
RLSVDYGKKSKMEFAIYPAPQISTAVVEPYNAVLVTHCTLEHSDCAFMVDNEAIYDVCRR
NLDIERPTYTNLNRLMAQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLLTYAPL
ISAEKAYHEQLSVSEITNSCFEPANQMVKCDPRQGKYMACCMLYRGDVVPKDVNAAIATI
KTKRSITFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRALCMLSNTTAIALAWTRLNLKF
DKMYAKRAFVHWYVGEGLEEGEFQDAREDMASLEKDYEEVAVDSSSLDRKAEEEE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcccagtgacaagaccatcggaggtggtgacgactccttcaacaccttcttcagtgag
acaggggcggggaaacacatcccacgagctgtgtttgtagatctggagcccaccgtgatt
gatgaggtccgcaccggcacctaccgccagctctttcacccggagcagctcatcacaggc
aaggaggatgcggcgaataactatgcacggggccactgctccatcggaaaggaaattgtg
gatctggtcttggatcgcatacggaaagtggctgatcaatgcaccggactccagggtttc
ctcatcttccacagttttgggggtggcacgggctcgggttttacttccctcctgatggag
agactctccgtcgactacgggaagaaatccaagatggagtttgccatttaccctgctccc
cagatttccactgcggtggtcgagccatataatgctgtgctcgtcacccactgcaccctg
gagcactctgactgtgccttcatggtggacaatgaggccatttacgatgtctgtcggcgt
aaccttgacatcgagagaccgacttacaccaacctcaaccgtctcatggcacagatagtg
tcatccatcacagcctcactccggttcgatggtgccctcaatgtggacctgactgagttc
caaaccaacctggtcccctatccccgcatccattttccattgttaacctacgcgcccctt
atatcggctgagaaagcttaccacgagcaactctcggtgtcggagatcaccaactcctgc
tttgaacctgctaaccagatggtgaagtgtgacccccgccagggcaagtacatggcgtgc
tgcatgctgtaccgaggagacgtggtgccaaaggatgtcaacgccgccatcgccaccatc
aagaccaagcgctcaatcacgtttgttgactggtgcccgactggattcaaggttggcatc
aactaccagcccccgacagtggtgccagggggtgatctggcaaaggtacaacgggccctc
tgtatgctgagcaacaccacagccattgccttggcttggacccgactgaacctcaaattc
gataagatgtacgccaagcgggcctttgtccattggtatgtgggggaggggctggaggaa
ggggagttccaggatgcacgtgaggacatggcctcactcgagaaggattatgaagaagtg
gccgtcgattcttcctcactggacagaaaggcagaggaggaagaataa
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