Scyliorhinus torazame (cloudy catshark): 140399007
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Entry
140399007 CDS
T11303
Name
(RefSeq) tubulin alpha chain-like
KO
K07374
tubulin alpha
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Pathway
stoz04145
Phagosome
stoz04210
Apoptosis
stoz04517
IgSF CAM signaling
stoz04530
Tight junction
stoz04540
Gap junction
stoz04814
Motor proteins
stoz05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
140399007
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
140399007
09143 Cell growth and death
04210 Apoptosis
140399007
09144 Cellular community - eukaryotes
04530 Tight junction
140399007
04540 Gap junction
140399007
09142 Cell motility
04814 Motor proteins
140399007
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
140399007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stoz03019
]
140399007
03036 Chromosome and associated proteins [BR:
stoz03036
]
140399007
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
stoz04812
]
140399007
04147 Exosome [BR:
stoz04147
]
140399007
Messenger RNA biogenesis [BR:
stoz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
140399007
Chromosome and associated proteins [BR:
stoz03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
140399007
Cytoskeleton proteins [BR:
stoz04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
140399007
Exosome [BR:
stoz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
140399007
Exosomal proteins of other body fluids (saliva and urine)
140399007
Exosomal proteins of colorectal cancer cells
140399007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin_C
Tubulin
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
140399007
NCBI-ProteinID:
XP_072344155
LinkDB
All DBs
Position
22:complement(36209751..36212597)
Genome browser
AA seq
415 aa
AA seq
DB search
MPSDKTIGGGDDSFNTFFSETGAGKHIPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITG
KEDAANNYARGHCSIGKEIVDLVLDRIRKVADQCTGLQGFLIFHSFGGGTGSGFTSLLME
RLSVDYGKKSKLEFSIYPAPQISTAVVEPYNAVLVTHCTLEHSDCAFMVDNEAIYDVCRR
NLDIERPTYTNLNRLMAQVVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLLTYAPL
ISAEKAYHEQLSVSEITNSCFEPANQMVKCDPRQGKYMACCMLYRGDVVPKDVNAAIATI
KTKRSISFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRALCMLSNTTAIALAWTRLNLKF
DKMYAKRAFVHWYVGEGLEEGEFQDAREDMASLEKDYEEVAVDSSSLDRKAEEEE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcccagtgacaagaccatcggaggtggtgacgactccttcaacaccttcttcagtgag
acaggagcggggaaacacatcccacgagctgtgtttgtagatctggagcccaccgtgatt
gatgaggttcgcactggcacctaccgacagctctttcacccggaacagctcatcacaggc
aaggaggatgcagcgaataactatgcacggggccactgctccatcggaaaggaaattgtg
gatctggtcttggatcgcatacggaaggtggctgatcaatgcaccggactccagggtttc
ctcatcttccacagttttgggggtggcacgggctcgggttttacttccctcctgatggag
agactctccgttgactacgggaagaaatccaagctggagttttccatttaccctgctccc
cagatttccactgcggtggtcgagccatataatgctgtgctcgtcacccactgcaccctg
gagcactctgactgtgccttcatggtggacaatgaggccatttacgatgtctgtcggcgt
aaccttgacatcgagagaccaacttacaccaacctcaaccgtctcatggcacaggtagtg
tcatccatcacggcctcactcaggttcgacggtgccctcaatgtggacctgactgagttt
caaaccaacctggtcccctatccccgcattcactttccattgttaacctacgcgcccctt
atatcagctgagaaagcttaccacgagcaactctcggtgtcggagatcaccaactcttgc
tttgaacctgctaaccagatggtgaagtgtgacccccgccagggcaagtacatggcgtgc
tgcatgctgtaccgaggagacgtggtgccaaaggatgtcaacgccgccatcgccaccatc
aagaccaaacgctcaatctcgtttgttgactggtgcccgactggattcaaggttggcatc
aactaccagcccccgacagtggtgccagggggtgacctggcaaaggtacaacgggccctc
tgtatgctgagcaacaccactgccattgccttggcttggacccgactgaacctcaaattc
gataagatgtacgccaagcgggcctttgtccattggtatgtgggggaagggctggaggaa
ggggagttccaggatgcacgtgaggacatggcgtcactcgagaaggattatgaagaagtg
gccgtcgattcttcctcactggacagaaaggcagaggaggaagaataa
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