KEGG   Scyliorhinus torazame (cloudy catshark): 140417916
Entry
140417916         CDS       T11303                                 
Symbol
sf3a3
Name
(RefSeq) splicing factor 3A subunit 3
  KO
K12827  splicing factor 3A subunit 3
Organism
stoz  Scyliorhinus torazame (cloudy catshark)
Pathway
stoz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:stoz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    140417916 (sf3a3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:stoz03041]
    140417916 (sf3a3)
Spliceosome [BR:stoz03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    140417916 (sf3a3)
 Complex B
    140417916 (sf3a3)
 Complex C
   U2 SnRNP specific factors
    140417916 (sf3a3)
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd
Other DBs
NCBI-GeneID: 140417916
NCBI-ProteinID: XP_072357452
LinkDB
Position
1:180593218..180645311
AA seq 500 aa
METILEQQRRYHEEKERLMDVMVKEMMVKKSTLRDQINSDHRGRAVLDRYMEVAGNLRDL
YEDKDCMRKDELNAISGPNEFGEFYNRLKMIKEFHRKHPNEISIPMSVEFEELMKTRDNP
SEEAQNLVEFTDEEGYGRYLDLHDCYLKYINLKGSEKSDYITYLITFDQLFDIPKERKNT
EYKRYLEMLLDYLQDYTDRVKPLLDQNELFGKIQIDFEKKWENGTFPGWPKETSSALTHA
GAHLDLSAFSSWEELASLGLDRLKSALMALGLKCGGTLEERAQRLFSTKGKSLEALDPSL
FAKSKSKGTKKDSERNKEIAFLEAQVYEYIEILGEQRQLTRENVQRKQARTGEEREEEDE
EHVSESESEDEENEIIYNPKNLPLGWDGKPIPYWLYKLHGLNINYNCEICGNYTYRGPKA
FQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWAKLKHSKAAERWQPDTEEEYED
SSGNVVNKKTYEDLKRQGLL
NT seq 1503 nt   +upstreamnt  +downstreamnt
atggagaccatcctggagcagcagcgccgctaccatgaggagaaggagcggctgatggat
gtgatggtgaaggagatgatggtgaagaaatccacgcttcgagaccagatcaactctgat
catcgtggtagagcagtgcttgatagatacatggaagtggctggaaatctaagagacttg
tatgaagataaagattgtatgaggaaggatgagttaaatgccatttcgggaccaaatgaa
tttggagaattctataaccggctgaagatgatcaaagaattccacagaaagcacccaaat
gagataagtattccgatgtcggtagagtttgaggaattgatgaagaccagggataatcca
agtgaggaggcacagaatctagtggagttcacagatgaggaaggatatggacgatatctc
gatcttcacgactgttatctcaaatacattaacttgaaaggttcagagaaatctgattat
attacctacttgatcacatttgatcaactttttgatattccgaaagagagaaaaaataca
gaatataagcggtatctggaaatgttgttggattatctccaagattatacagatcgggtg
aagccattactggatcagaatgaactctttggtaaaatacaaattgactttgagaaaaaa
tgggaaaacggcacctttcctggctggccaaaagagacgagcagtgcgctgactcacgct
ggagctcatttagatctgtcggctttctcatcctgggaagaattggcttccttgggattg
gacagactgaaatctgctttgatggctttgggtttgaaatgtggcgggaccttagaagag
agagcccagagattattcagtactaaagggaaatctctggaggcactggacccttcatta
tttgcaaaatctaaatccaaaggcactaaaaaggattccgaacgcaacaaagaaattgct
tttcttgaagctcaggtgtatgaatatatagaaattcttggggaacagagacagctcacc
agagaaaatgtacaacgcaaacaagctcggactggagaggaacgagaggaggaggatgag
gagcatgtcagtgagagtgaaagtgaagatgaggaaaatgaaatcatctacaatcccaag
aacctaccattgggttgggatggcaagcctatcccatattggttgtacaagctgcacggt
ttgaacatcaactacaactgtgaaatctgtggaaattatacttacagaggaccgaaagca
ttccagcgccactttgcagaatggcgtcatgctcatggcatgaggtgtctgggaatccct
aacactgcacattttgcaaatgtcactcaaattgaggatgcagtatccttgtgggcgaaa
ctgaagcattcaaaggcagcagagagatggcagccagacactgaggaggaatatgaagat
tcaagtggaaatgtagttaacaagaagacctatgaagatttaaagcgacaaggactgctc
taa

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