Scyliorhinus torazame (cloudy catshark): 140426188
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Entry
140426188 CDS
T11303
Symbol
rad54l
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Pathway
stoz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
140426188 (rad54l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stoz03400
]
140426188 (rad54l)
DNA repair and recombination proteins [BR:
stoz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
140426188 (rad54l)
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Rad54_N
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
140426188
NCBI-ProteinID:
XP_072366757
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All DBs
Position
7:49032550..49085539
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AA seq
740 aa
AA seq
DB search
MRRSLAPSQLAKRKPGHLPDEDTNPKRQKVRSEYDAGESFVSPFRKPLAQLTNQPVCLDS
SQHEAFIRSILAKPFRVPIPNYTGSLGLRALGIKRAGARRSLHDPYEEGALVLYEPPPLS
AHDQLKADKEKLPVHVVVDPILSSVLRPHQREGVKFMWDCVTGRRIVDGFGCIMADEMGL
GKTLQCISLMWTLLRQSPDVKPEIEKIIVVTPSSLVKNWYNEVEKWLTGKLQSLTIDGGT
KSEIDQKLATFMSQHGLRIPTPILIISYETFRLHADVLCKSAVGMVICDEGHRLKNSDNQ
TYQALDNLKAKRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQEFKKRFELPILKGRDA
AASENERQHGEEKLKELIGIVNRCLIRRTSDILSKYLPVKIEQIVCCRLTTLQSELYKLF
LKQAKPAVEMEQSHSGKMSVSSLSSITSLKKLCNHPTLIYEKCVEGEEGFQGALDLFPSG
YSTKSVEPQLSGKMLTLDYILAITRSTSSDKVVLVSNYTQTLDLFEKLCRDRRYLYVRLD
GTMTVKKRAKIVERFNNPTSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAM
ARIWRDGQKKICYIYRLLSTGTIEEKIFQRQTHKKALSSCVVDEEQDVERHFSLGELKEL
FTLNENTTSDTHDRLKCRRCVNGHQVRCPPEGSDCTSDLSQWNHCAGKRGLHDMVLQSAW
DAAVSFVFHHYSHEQQRGVI
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaagcttagccccgagtcagcttgccaagcgtaagccaggacatttgcctgat
gaggatacgaatccaaaaaggcaaaaggtgcgatccgagtatgacgctggtgaaagtttt
gtgtcaccatttcggaaaccactagcccagctgaccaatcaacctgtgtgccttgacagc
agccagcatgaggctttcattcggagcatcttggccaaacctttccgagtgcctattcca
aactacacaggttctcttggattgagggcacttgggattaagcgtgcaggagccagacga
tctctccatgatccatatgaagaaggtgctctggtactctatgaacctccacctctgagt
gcacatgaccaactaaaggctgacaaagagaagcttccagtacatgtggtggtcgatcct
atcctatcctctgtcttaagaccacatcagagagagggtgtgaagttcatgtgggactgt
gtgacaggccgacgtattgtggatggctttggctgtattatggcagatgaaatgggattg
ggaaaaacattgcagtgcatttccctgatgtggaccctcctgcgacaaagcccagatgtc
aagccagagattgagaaaatcattgttgtgactccatccagtttggtgaaaaactggtac
aatgaggtggagaagtggctgacaggaaagttacaatcattgactattgatggaggaact
aagtccgagattgaccagaaactggctacattcatgagccagcatgggttacggattcca
actccaatcctgatcatttcttatgagacattccggctacatgccgacgtgctttgcaag
agtgctgttggcatggtcatttgtgatgagggccacaggttgaagaattccgacaaccag
acataccaggccctggacaatctaaaggccaagcgccgtgtgttgatctcggggactcca
atccagaatgacctacttgagtacttcagccttgtacattttgtcaatgctggaatactc
gggactgcacaggaatttaagaagcgatttgaattgcccatattgaagggccgtgacgca
gctgcaagtgagaatgaaagacagcatggtgaggagaagctaaaagaattgattggcatt
gtgaacaggtgtttaattcgaagaacatcagatattctctccaaatacttgccggtgaag
attgagcagattgtctgctgcagactgacgactctgcagtcagagttgtacaaactgttc
ttaaaacaagccaaaccagcagtagaaatggaacaatctcacagtgggaagatgagcgtc
tcttctctatcttcaattacttcactgaaaaaactttgtaaccacccgacattgatctat
gagaagtgtgtggaaggtgaagaaggatttcagggagcactcgatctctttccatcagga
tacagcacaaaatctgtggaacctcagttgtctggcaagatgcttacccttgattatatc
ctggccataactcgaagtactagctctgataaggtggtactcgtatcaaactacacacag
actcttgatttgtttgagaagctctgcagagacaggagatacctgtatgttagactggat
ggtaccatgacagtgaaaaagagggccaaaattgtggaacgtttcaataatcccacaagt
ccggaatttatcttcatgctgagcagcaaagctggtgggtgtggcttgaatctgattggt
gccaatcggttagtcatgtttgatccagactggaatccagctaatgacgaacaagcaatg
gctcgtatatggcgagatggacagaagaaaatttgctacatctacaggcttttgtcgact
gggacaatcgaggagaagattttccagcgtcagacacataaaaaggccctgagtagctgt
gtcgtggatgaggaacaagatgttgaacgacacttctcgctcggagaacttaaggagctc
tttactctaaatgagaacacaactagtgacacgcacgataggttgaagtgtcgccgatgt
gtcaatggacaccaggtgcgctgtcctcctgagggctcagattgtacgtctgatctctcc
cagtggaaccactgtgcaggtaaacgtggactacatgacatggtccttcagtctgcctgg
gatgccgcagtctcctttgtgtttcatcactactcccatgagcaacagcgtggagttatc
tga
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