Scyliorhinus torazame (cloudy catshark): 140426743
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Entry
140426743 CDS
T11303
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Pathway
stoz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
140426743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stoz03019
]
140426743
03012 Translation factors [BR:
stoz03012
]
140426743
Messenger RNA biogenesis [BR:
stoz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
140426743
Translation factors [BR:
stoz03012
]
Eukaryotic type
Release factors
140426743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
140426743
NCBI-ProteinID:
XP_072367978
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Position
7:complement(187063703..187217474)
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AA seq
437 aa
AA seq
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MADDPTAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGTGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLFISSDKVNVAGLILAGSADFKTELSQSD
MFDPRLQSKVLKLVDISYGGENGFNQAIELSAEVLSSVKFIQEKKLIGRYFDEISQDTGK
YCFGVDDTLKALEMGAVEILIVYENLDIMRYVLRCHGTEEEKILYLTPEQEKDKSHFTDK
ETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQ
GMEYQGDEDDFYDLDDY
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgacccgaccgcagccgacaggaacgtggagatctggaagatcaagaaactc
atcaagagcctggaggccgccagagggaatggcaccagtatgatttcgctcatcattcct
cccaaagaccagatctcacgagtagcaaagatgttggcggatgaatttggcactgcctca
aacatcaaatctcgagtgaaccgtctatctgtgctgggggccattacgtctgtgcaacag
cgtcttaaactatataataaagtaccgcctaatggtttggttgtctactgtggaacaatt
gtaacggaagaaggcaaagaaaagaaagttaacattgattttgagcctttcaaaccaatt
aacacatcactatacctctgtgacaataaatttcacacagaagctctcactgcgctactg
tcagatgacagcaaatttgggttcatcgtaattgacggtactggagctttgttcggtact
ctccaggggaacacacgggaggtactacacaagttcactgtggatctaccaaagaagcat
ggcagaggaggtcagtccgccttgcgttttgctcgcctgagaatggaaaagagacataac
tacgtgcggaaggtagcagagacggctgtgcagctgttcatcagcagtgacaaggtgaac
gtggcgggtctcatcttggctggttccgctgatttcaaaactgagctcagccagtccgac
atgtttgatccgcgattacagagcaaagtgctgaaactagtggacatctcctacggaggt
gagaatggtttcaatcaagcaatcgaactgtcggctgaggtcttgtctagtgtgaagttc
attcaggaaaagaaactaatagggcgatactttgatgaaatcagccaggatacagggaag
tactgcttcggagtggatgacacgttgaaagcgctggagatgggtgcagttgagatcctg
atagtttacgaaaatctggatattatgcgatatgtacttcgttgtcatggcacagaagaa
gagaaaatcttgtacctgacacctgaacaagagaaggataaatcccatttcacggacaaa
gagactggacaggaacatgaacttatagaaagcatgcccctcttggagtggtttgctaac
aactacaaaaaatttggagctacactggagatcgtcacagacaagtcacaagaagggtcc
cagtttgtgaagggctttggtgggattggtggtatcctgcggtaccgtgtggactttcaa
ggtatggaataccagggagatgaggatgacttttacgacctggacgactactag
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