Streptomyces sp. PBH53: QR97_10990
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Entry
QR97_10990 CDS
T10303
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
stpb Streptomyces sp. PBH53
Pathway
stpb00040
Pentose and glucuronate interconversions
stpb01100
Metabolic pathways
stpb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
stpb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
QR97_10990
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
QR97_10990
Enzymes [BR:
stpb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
QR97_10990
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
AKN70297
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Position
2470276..2471619
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AA seq
447 aa
AA seq
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MAAPSHRRSLRKRRTLAVSAAVVAAGVGAGVFVMSANADGVDLYHQTLAAKDGWAASGTG
TTGGAKADSAHTFTVSTRAQLVKALGSASDTTPRIIKVKGTIDANTDDSGRKLTCADYAS
GTGYSLSAYLKAYDPATYGRSKLPSGTQEKARAAAQAKQAKNIVFKVPANTTIVGVPGTD
AGITGGMLQIQNVDNVIVRNLTFSATEDCFPQWDPTDGDDGNWNSNYDSVSLRGATHVWA
DHNTFTDAPHFDKANPTYFGREYQIHDGALDITKGSDLVTVERNRFTDHDKTMLIGSSDK
DSTGKLRVSIHHNVWKGIVQRAPLARLGQIHIYNNVYDTTTVNGYAPQYSINSRAKAQVV
AEANHWTVPSGGKVAKLLSGDGTGSVAGSGNLVNGTVTDLVAAYNAASSKKIRTTVNWTP
TLTAGFQASAKNLPAELAGTTGAGVLK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
gtggcagctccctcccaccgccggtccctccgcaagcggcgcaccctcgccgtgtccgcc
gccgtcgtggccgcgggtgtcggtgccggggtgttcgtgatgagcgcgaacgccgacggc
gtcgacctgtaccaccagaccctcgccgccaaggacggctgggccgcctccggcacgggg
accaccggcggcgcgaaggccgactccgcgcacaccttcaccgtctccacccgggcccag
ctcgtgaaggcgctgggttcggcctccgacaccacgccccgcatcatcaaggtcaagggc
acgatcgacgccaacaccgacgacagcggcaggaagctgacctgcgccgactacgcgtcc
ggcaccggctactcgctgtcggcctacctcaaggcctacgacccggccacctacggccgc
tccaagctgccctccggcacccaggagaaggcccgcgccgccgcccaggccaagcaggcg
aagaacatcgtcttcaaggtgccggccaacaccaccatcgtgggcgtgcccggcaccgac
gccgggatcaccggcggcatgctccagatccagaacgtggacaacgtcatcgtccgcaac
ctgaccttctccgccaccgaggactgcttcccgcagtgggacccgaccgacggcgacgac
ggcaactggaactccaactacgactcggtcagcctgcgcggagcgacccacgtctgggcg
gaccacaacacgttcaccgacgcgccgcacttcgacaaggcgaacccgacgtacttcggc
cgcgagtaccagatccacgacggcgccctcgacatcaccaagggctccgacctggtgacc
gtcgagcgcaaccggttcaccgaccacgacaagacgatgctgatcggcagcagcgacaag
gacagcaccggcaagctgcgcgtctcgatccaccacaacgtgtggaagggcatcgtccag
cgcgccccgctggcccgcctcggtcagatccacatctacaacaacgtgtacgacacgacg
accgtcaacggctacgcgccccagtacagcatcaactcccgcgcgaaggcccaggtcgtc
gcggaggccaaccactggacggtgccgtccggcggcaaggtcgccaagctgctcagcggc
gacggcacgggctccgtcgcgggcagcggcaacctggtcaacggcacggtgaccgacctg
gtcgccgcctacaacgccgcgtcgtcgaagaagatcaggacgacggtgaactggaccccg
accctcaccgcgggcttccaggcgtcggcgaagaacctgccggcggaactggcgggcacg
accggcgccggcgtgctgaagtaa
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