Streptomyces sp. CNQ-509: AA958_21055
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Entry
AA958_21055 CDS
T03968
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
strc
Streptomyces sp. CNQ-509
Pathway
strc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
strc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AA958_21055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
strc03021
]
AA958_21055
03400 DNA repair and recombination proteins [BR:
strc03400
]
AA958_21055
Enzymes [BR:
strc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AA958_21055
Transcription machinery [BR:
strc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AA958_21055
DNA repair and recombination proteins [BR:
strc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AA958_21055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
AKH84266
LinkDB
All DBs
Position
4887515..4891000
Genome browser
AA seq
1161 aa
AA seq
DB search
MAASRTASTASTNNGASTAPLRISFAKIKEPLEVPNLLALQTESFDWLLGNDAWKARVEE
ALDHGQDVPTKSGLEEIFEEISPIEDFSGSMSLTFRDHRFEPPKNSIDECKERDFTYAAP
LFVTAEFTNNETGEIKSQTVFMGDFPLMTDKGTFVINGTERVVVSQLVRSPGVYFDSSID
KTSDKDIFSVKVIPSRGAWLEMEIDKRDMVGVRIDRKRKQSITVLLKALGWTNEQILEEF
GEYESMRATLEKDHTQGQDDALLDIYRKLRPGEPPTKEAAQTLLENLYFNPKRYDLAKVG
RYKINKKLGAAAPLDAGTLTVEDIIASIKYLVKLHAGEVETVGDNGQSVVVETDDIDHFG
NRRIRNVGELIQNQVRTGLARMERVVRERMTTQDVEAITPQTLINIRPVVASIKEFFGTS
QLSQFMDQTNPLSGLTHKRRLNALGPGGLSRERAGFEVRDVHPSHYGRMCPIETPEGPNI
GLIGSLASYGRVNAFGFIETPYRKVVGGVVTDDVDYLTADEEDRFVIAQANAPLTNDLHF
AENRVLVRRRGGEVDYIPGDDVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGSNMMRQ
AVPLIRAEAPLVGTGMEYRCAVDAGDVIKADKDGVVQEVSADYVTVANDDGTYTTYRVNK
FHRSNQGTSFNQKVLVDEGSRVIEGQVLADGPSTDEGEMALGKNLLVAFMPWEGHNYEDA
IILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEVLADLDERGIIRIGA
EVVAGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGETGRVIGVRVFD
REEGDELPPGVNQLVRVYVAQKRKITDGDKLAGRHGNKGVIAKILPIEDMPFMEDGHPVD
IILNPLGVPSRMNPGQVLEIHLGWLAAQGWDVSGIKEEWAERLQGIGADQVASGTNVATP
VFDGAREDELAGLIQNTLPNRDGDRMVQPSGKAQLFDGRSGEPFPEPISVGYMYILKLHH
LVDDKLHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDD
VTGRVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSSDGMSIEMRDTDEDVF
RAAEELGIDLSRREPSSVEEV
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
ttggccgcctcgcgcaccgcctcgaccgctagtacgaacaacggcgccagcaccgccccg
ctgcgcatctctttcgcgaagatcaaggaacccctcgaggttccgaaccttcttgcgctc
cagaccgagagcttcgactggctcctcggcaacgacgcctggaaggctcgtgtcgaggag
gccctggatcatggacaggacgtccccaccaagtccggcctcgaggagatcttcgaggag
atctccccgatcgaggacttctccgggtcgatgtcgctgaccttccgcgaccaccgcttc
gagcccccgaagaactccatcgacgagtgcaaggagcgcgacttcacctacgccgcgccg
ctcttcgtcaccgccgagttcaccaacaacgagaccggggagatcaagtcccagacggtc
ttcatgggcgacttcccgctcatgacggacaagggcaccttcgtgatcaacggcaccgag
cgtgtcgtggtctcgcagctcgtccggtccccgggcgtctacttcgactcctccatcgac
aagacctccgacaaggacatcttctccgtcaaggtcatcccctcccggggcgcctggctg
gagatggagatcgacaagcgcgacatggtcggtgtccgcatcgaccgcaagcgcaagcag
tcgatcaccgtgctgctcaaggccctcggctggacgaacgagcagatcctcgaggagttc
ggcgagtacgagtccatgcgcgccaccctggagaaggaccacacccagggccaggacgac
gcgctgctcgacatctaccgcaagctgcgtccgggcgagccgccgaccaaggaggccgcg
cagacgctgctggagaacctgtacttcaaccccaagcgctacgacctcgccaaggtcggc
cgctacaagatcaacaagaagctgggcgccgccgcgccgctcgacgccggcacgctgacg
gtcgaggacatcatcgcctcgatcaagtacctggtgaagctgcacgccggtgaggtcgag
accgtcggggacaacggccagtccgtggtcgtcgagaccgacgacatcgaccacttcggc
aaccgccgcatccgcaacgtcggcgagctgatccagaaccaggtgcgtacgggcctcgcc
cgtatggagcgcgtcgtgcgcgagcgcatgacgacccaggacgtcgaggcgatcacgccg
cagaccctgatcaacatccggccggtcgtcgcctccatcaaggagttcttcggcaccagc
cagctctcgcagttcatggaccagacgaacccgctgtccgggctcacccacaagcgccgg
ctcaacgcgctgggccccggcggtctctcccgtgagcgggccggcttcgaggtccgcgac
gtgcacccgtcgcactacggccgcatgtgtccgatcgagacgccggaaggcccgaacatc
ggcctcatcggctcgctcgcctcgtacggccgggtcaacgccttcggcttcatcgagacc
ccgtaccgcaaggtcgtcggcggcgtcgtcaccgacgacgtggactacctgacggccgac
gaggaggaccgcttcgtcatcgcgcaggccaacgcgccgctcacgaacgacctgcacttc
gccgagaaccgggtcctggtccgccgccgcggcggtgaggtcgactacatccccggcgac
gacgtcgactacatggacgtctcgccgcgccagatggtgtcggtcgcgaccgcgatgatc
cccttcctggagcacgacgacgccaaccgcgcgctcatgggctccaacatgatgcgccag
gccgtgccgctgatccgggccgaggccccgctcgtcggcaccggcatggagtaccgctgc
gcggtcgacgccggcgacgtcatcaaggccgacaaggacggcgtggtccaggaggtctcc
gcggactacgtcaccgtcgccaacgacgacggcacgtacaccacgtaccgcgtcaacaag
ttccaccgctccaaccagggcacctccttcaaccagaaggtgctcgtggacgagggctcc
cgcgtcatcgagggccaggtgctcgccgacggcccctcgaccgacgagggcgagatggcg
ctcggcaagaacctcctggtggcgttcatgccgtgggagggccacaactacgaggacgcc
atcatcctcagccagcgcctcgtgcaggacgacgtcctgtcctcgatccacatcgaggag
cacgaggtcgacgcccgcgacaccaagctgggccccgaggagatcacccgggacatcccg
aacgtctccgaggaggtcctggccgacctcgacgagcgcggcatcatccgcatcggtgcc
gaggtcgtcgccggcgacatcctggtcggcaaggtcacgcccaagggcgagacggagctg
accccggaggagcggctgctgcgcgcgatcttcggcgagaaggcccgcgaggtccgtgac
acgtccctgaaggtcccgcacggcgagaccggccgcgtcatcggcgtccgcgtcttcgac
cgcgaggagggcgacgaactgccgcccggcgtgaaccagctcgtccgggtctacgtcgcc
cagaagcgcaagatcaccgacggcgacaagctcgccggccggcacggcaacaagggcgtc
atcgccaagatcctgccgatcgaggacatgccgttcatggaggacggccacccggtcgac
atcatcctcaacccgctcggcgtgccttcccggatgaacccgggtcaggtgctggagatc
cacctgggctggctcgccgcccagggctgggacgtctccggcatcaaggaggagtgggcc
gagcgcctgcagggcatcggcgccgaccaggtcgcatccggtacgaacgtggcgacgccg
gtcttcgacggcgcccgtgaggacgagctggccggcctcatccagaacacgctgcccaac
cgcgacggcgaccgcatggtgcagccgtccggcaaggcgcagctcttcgacggccgctcc
ggcgagccgttcccggagccgatctccgtcggctacatgtacatcctcaagctgcaccac
ctcgtggacgacaagctccacgcccggtccaccggcccgtactcgatgatcacccagcag
ccgctgggcggtaaggcgcagttcggcggccagcggttcggcgagatggaggtgtgggcc
ctggaggcgtacggcgccgcctacgcactgcaggaactgctcaccatcaagtcggacgac
gtgaccggccgcgtgaaggtctacgaggccatcgtcaagggcgagaacatccccgagccg
ggcatccccgagtccttcaaggtgctcatcaaggagatgcagtccctgtgcctgaacgtg
gaggtgctctcctccgacggcatgtccatcgagatgcgcgacacggacgaggacgtcttc
cgtgccgccgaagagcttggcatcgacctgtcccggcgcgagccgagcagcgtcgaagag
gtctga
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integrated database retrieval system
