Streptomyces sp. 4F: ASR50_21290
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Entry
ASR50_21290 CDS
T04265
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
strf
Streptomyces sp. 4F
Pathway
strf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
strf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ASR50_21290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
strf03021
]
ASR50_21290
03400 DNA repair and recombination proteins [BR:
strf03400
]
ASR50_21290
Enzymes [BR:
strf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ASR50_21290
Transcription machinery [BR:
strf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ASR50_21290
DNA repair and recombination proteins [BR:
strf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ASR50_21290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
TarH
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
ALV51690
LinkDB
All DBs
Position
4743232..4747143
Genome browser
AA seq
1303 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITYVDEERRTRDLPSLEAHVSVERQQIENRRDADLEARAKKLETD
LAELEAEGAKADVRRKVREGAEREMKQLRDRAQREIDRLDEVWNRFKNLKVQDLEGDELL
YRELRDRFGTYFDGSMGAAALQKRLESFDLEEEAEKLREIIRTGKGQKKTRALKRLKVVS
AFLQTSNSPKGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDGEMRDLKGE
GRSFASVAEAIMAFDAGELSLQSKIDIRFPVGTIPPRGWTPPVGEDGETEGGAEWQQGDP
FRLNTTLGRALFNELLPEDYPFVDYEVGKKQLSEIVNDLAERYPKVIVAATLDNLKAAGF
YWATRSGVTVAISDVVVPEAKKEIVKGYEAQDEKVQKQYERGLITKDERTQELINIWTKA
TNEVAEAMNDNFPKTNPIFMMVNSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASFR
EGLSVLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTDRGLRLKI
ASRDETGVLRKEGDVETSVYARCLAEDIVVDGQVLAPAGTDLGDVLIEELVQRGVEEVKT
RSVLTCESAVGTCAMCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAG
DDITQGLPRVVELFEARTPKGVAPISEASGRVRIEETEKTKKLVVTPDDGSDETAYPISK
RAKVLVSEGEHVEVGQQLTVGATNPHDVLRILGQRAVQVHLVGEVQKVYNSQGVSIHDKH
IEIIIRQMLRRVTIIESGDAELLPGELVERSKFETENRRVVQEGGHPASGRPQLMGITKA
SLATESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLSRYRNIRVE
PTEEAKAAMYSAVGYDDIDYSPFGTGSGQAVPLEDYDYGPYNQ
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagctccggatcggtctggccaccgctgacgacatc
cgtcagtggagccacggcgaggtcaagaagcccgagaccatcaactaccgcaccctcaag
cccgagaaggacggactcttctgcgagaagatcttcggtccgacccgggactgggagtgc
tactgcggcaagtacaagcgcgtccgcttcaagggcatcatctgtgagcgctgtggcgtc
gaggtcacgcgcgccaaggtgcgccgtgagcggatgggccacatcgagctcgccgcgccc
gtcacgcacatctggtacttcaagggtgtcccgagccggctgggctacctgctcgacctg
gccccgaaggacctcgagaaggtcatctacttcgccgcgtacatgatcacgtacgtggac
gaggagcgccgtacccgcgacctgccgtcgctggaggcccacgtctccgtcgagcgtcag
cagatcgagaaccgccgggacgccgacctggaggcccgcgccaagaagctcgagaccgac
ctggccgagctcgaggccgagggcgccaaggccgacgtccgccgcaaggtgcgcgagggc
gccgagcgtgagatgaagcagctgcgcgaccgtgcgcagcgcgagatcgaccgcctcgac
gaggtgtggaaccggttcaagaacctcaaggtccaggacctcgagggcgacgagctgctc
taccgcgagctgcgtgaccgcttcggcacgtacttcgacggctcgatgggcgccgcggcg
ctgcagaagcgcctggagtccttcgacctcgaggaggaggccgagaagctccgcgagatc
atccgcaccggcaagggccagaagaagacccgcgccctgaagcggctgaaggtcgtctcc
gcgttcctgcagacctccaacagccccaagggcatggtcctggactgcgtcccggtcatc
ccgccggacctgcgtccgatggtgcagctggacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgtgtcatcaaccgcaacaaccgcctgaagcggcttctcgacctc
ggcgcgcccgagatcatcgtgaacaacgagaagcgcatgctccaggaggccgtggacgcg
ctcttcgacaacggccgtcgtggccgcccggtgacgggccccggcaaccgtccgctgaag
tcgctgtccgacatgctcaagggcaagcagggccgcttccgtcagaacctgctcggcaag
cgagtcgactactcggcgcgttccgtcatcgtcgtcggcccgcagctgaagctgcaccag
tgcggtctgcccaaggccatggcgctggaactcttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccacgcgcagaacatcaagtcggccaagcgcatggtcgagcgcggccgc
acggtcgtgtacgacgtgctggaagaggtcatcgcggagcacccggttctgctgaaccgt
gcgcccacgctgcaccgcctcggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtccacctgccgctctccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctcaagccggccgacggccgcccggtgacgatgccgacccaggac
atggtcctcggtctgttcttcctcaccaccgacggcgagatgcgcgacctcaagggcgag
ggccgttccttcgcctcggtcgcggaggcgatcatggccttcgacgcgggcgagctctcg
ctccagtcgaagatcgacatccgcttcccggtcggcaccatcccgccgcgcggctggacc
ccgccggtgggcgaggacggcgagaccgagggcggcgccgagtggcagcagggggacccg
ttccgcctgaacaccaccctgggccgggcgctcttcaacgagctgctgcccgaggactac
ccgttcgtcgactacgaggtcggcaagaagcagctctccgagatcgtcaacgacctcgcc
gagcggtacccgaaggtcatcgtggcggcgacgctcgacaacctgaaggcggccggcttc
tactgggcgacccgttccggcgtcaccgtggccatctccgacgtcgtcgttcccgaggcg
aagaaggagatcgtcaagggctacgaggcgcaggacgagaaggtccagaagcagtacgag
cgcggtctgatcaccaaggacgagcgcacgcaggagctcatcaacatctggaccaaggcg
accaacgaggtcgccgaggcgatgaacgacaacttcccgaagaccaacccgatcttcatg
atggtgaactcgggtgcacgaggcaacatgatgcagatgcgtcagatcgccggtatgcgt
ggtctggtgtcgaacgcgaagaacgagacgatcccgcgtccgatcaaggcgtcgttccgt
gagggcctgtccgtgctggagtacttcatctccacgcacggtgcccgtaagggtctggcg
gacaccgctctgcgtaccgccgactcgggttacctcacccgtcgtctggtcgacgtctcc
caggacgtcatcatccgcgaggaggactgcggcaccgaccgcggtctgcgcctgaagatc
gcgagccgggacgagacgggcgtgctccgcaaggagggcgacgtcgagacgtccgtgtac
gcgcgctgcctcgccgaggacatcgtcgtcgacgggcaggtgctggccccggccggcacc
gacctgggcgacgtcctcatcgaggagctcgtccagcgcggcgtcgaggaggtcaagacc
cgctcggtcctgacctgcgagtccgccgtcggcacctgcgcgatgtgctacggccgttcg
ctggccacgggcaagctggtcgacatcggtgaggcggtcggcatcatcgccgcccagtcc
atcggtgagcccggcacccagctgacgatgcgtaccttccacaccggtggtgtggccggt
gacgacatcacccagggtctgccgcgtgtcgtcgagctcttcgaggcccgtaccccgaag
ggtgtcgccccgatctccgaggcctccggccgcgtgcggatcgaggagacggagaagacg
aagaagctcgtcgtcaccccggacgacggcagcgacgagacggcgtacccgatctcgaag
cgcgccaaggtcctggtctccgagggcgagcacgtcgaggtgggccagcagctcaccgtg
ggtgccaccaacccgcacgacgtgctgcgcatcctgggtcagcgtgccgtccaggtccac
ctggtcggcgaggtccagaaggtctacaactcgcagggcgtgtcgatccacgacaagcac
atcgagatcatcatccggcagatgctgcgccgcgtgacgatcatcgagtccggcgacgcc
gagctgctgcccggcgagctggtcgagcggtcgaagttcgagaccgagaaccgtcgtgtg
gtccaggagggcggtcacccggcctccggtcgtccgcagctcatgggtatcaccaaggcc
tcgctggccacggagtcctggctgtcggcggcgtccttccaggagacgacgcgagtcctc
acggacgcggcgatcaacgccaagtccgactcgctcatcggcctcaaggagaacgtcatc
atcggtaagctcatcccggccggtacgggtctgtcccgctaccgcaacatccgggtcgag
ccgaccgaggaggccaaggccgcgatgtactcggccgtcggctacgacgacatcgactac
tcgccgttcggcaccggctccggccaggccgttccgctggaggactacgactacggtccg
tacaaccagtaa
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integrated database retrieval system
