Salmo trutta (river trout): 115149970
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Entry
115149970 CDS
T08542
Symbol
slc6a11
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
stru
Salmo trutta (river trout)
Pathway
stru04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
115149970 (slc6a11)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
stru02000
]
115149970 (slc6a11)
Transporters [BR:
stru02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
115149970 (slc6a11)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
115149970
NCBI-ProteinID:
XP_029548670
Ensembl:
ENSSTUG00000046750
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Position
16:4366746..4452024
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AA seq
611 aa
AA seq
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MTGEKKVSVINGKPEDALDFESANDKKPVNERGHWNNKIEFVLSVAGEIIGLGNVWRFPY
LCYKNGGGAFFVPYIIFFICCGIPVFFLETALGQFTSEGGITCWRKCCPLFEGIGYATQV
IVAHLNVYYVVILSWAIFYLFNCFTTELPWASCDHYWNTENCVDFQRNGTNFTFNPNATS
PVVEFWERRVLKISSGIEHIGKLRWELALCLALAWVICYFCIWKGPKSTGKVVYVTATFP
YAMLLVLLIRGVTLPGAWEGIKFYLYPDISRLSDPQVWVDAGTQIFFSYAICLGCLTALG
SYNSYDNNCYRDCIMLCCLNSGTSFVAGFAIFSVLGFMALEQGVPIEAVAESGPGLAFIA
YPKAVTMMPLSPLWACLFFMMLIFLGLDSQFVCVESLVTAVIDMYPETFRRGYRREMLIL
GLSICSFFVGLIMLTEGGMYVFQLFDSYAASGMCLLFVAIFESICIGWVYGSDRFYMNIE
DMIGYRPAIFIKWCWMLLTPGICAGIFLFFLIKYKPLKYNNVYIYPDWGYGIGWMMALSS
MVCIPLGVIIQLWKTPGSFSERMTFLTTPSPDLVMRGKLAGMSPFTIRPKPSKESKKAAK
ISTITEKETHF
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgacaggcgagaagaaagtctcagtaatcaatggcaaaccagaggacgccctggacttc
gagtcagccaacgacaagaaaccggtcaacgagaggggccactggaacaacaagattgag
tttgtcctgtcggtggcaggagagatcatagggctgggaaacgtgtggcgcttcccctac
ctgtgttacaagaatggaggaggtgcgttcttcgttccatatataatcttctttatatgt
tgtggtatcccggtgttcttcctggagacagctctgggacagttcaccagcgaaggaggc
atcacatgttggaggaaatgctgcccgctctttgaaggtattggctatgcgacccaggtg
atcgtggcccatttgaatgtgtattatgtagttatcctgtcctgggctatcttctacctg
ttcaactgctttaccacggagctaccctgggcctcgtgtgatcactactggaacacagag
aactgtgtggatttccagaggaacggcaccaatttcaccttcaaccccaacgccacctca
cctgtcgtagagttctgggaacgtcgtgtcctcaagatctccagtgggattgaacacatc
gggaagctacgctgggaactggctctgtgtctggctctggcttgggtcatctgctacttc
tgcatatggaaagggcccaaatccaccggaaaggtggtgtacgtaaccgctaccttcccc
tatgccatgctgttggtcctgctgatccgaggggtgactctgccgggggcgtgggaagga
atcaagttctacctgtaccctgatatctcccgcctctcagacccacaggtgtgggtggat
gctgggacacagatcttcttctcctatgccatctgtctggggtgcctgacggccctcggg
agctacaacagctacgacaacaactgttacagggactgcatcatgctgtgctgtctgaat
agtgggaccagctttgtggcgggcttcgccatcttctctgtgcttggcttcatggcctta
gaacagggtgtgcccatcgaggccgtggcagagtctggtccaggcttagccttcatagcc
taccctaaagctgtgaccatgatgcctctgtctcctctgtgggcttgtctcttcttcatg
atgctcatcttcctggggctggacagccagtttgtgtgtgtagagagcctggtgacagcg
gtaatagacatgtacccagagaccttcaggagaggctaccgtcgagaaatgctcatcctg
ggcttgtctatatgctctttcttcgtggggctcatcatgttgacagagggtggaatgtac
gtgttccagctgtttgactcgtacgcggccagcgggatgtgtctgctgtttgtggctatc
ttcgagtcaatatgtatcggctgggtatacggaagtgacaggttctatatgaacatcgag
gatatgattggataccggcctgccatcttcatcaaatggtgctggatgctgctgacccca
ggcatctgtgctggtatcttcctgttcttcctgattaagtacaagcctctgaagtacaac
aacgtgtatatctacccagactggggctacggtataggctggatgatggccctgtcctcc
atggtctgcattcccctaggagtcatcatacagctctggaaaacacctggaagcttctca
gagaggatgactttcctgaccacccccagtccagatctggtgatgagaggtaaactggct
ggtatgagccccttcaccatcagacccaagcccagtaaagagtcaaagaaagctgcaaag
atctctaccatcacagagaaggagacccatttctaa
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