Salmo trutta (river trout): 115153336
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Entry
115153336 CDS
T08542
Name
(RefSeq) sodium/calcium exchanger 1-like isoform X1
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
stru
Salmo trutta (river trout)
Pathway
stru04020
Calcium signaling pathway
stru04260
Cardiac muscle contraction
stru04261
Adrenergic signaling in cardiomyocytes
stru04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
115153336
04020 Calcium signaling pathway
115153336
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
115153336
04261 Adrenergic signaling in cardiomyocytes
115153336
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
stru02000
]
115153336
00536 Glycosaminoglycan binding proteins [BR:
stru00536
]
115153336
Transporters [BR:
stru02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
115153336
Glycosaminoglycan binding proteins [BR:
stru00536
]
Heparan sulfate / Heparin
Others
115153336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
CFSR
Motif
Other DBs
NCBI-GeneID:
115153336
NCBI-ProteinID:
XP_029554534
Ensembl:
ENSSTUG00000008176
UniProt:
A0A673X210
LinkDB
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Position
18:complement(42915530..43095846)
Genome browser
AA seq
946 aa
AA seq
DB search
MGHFQISPILSLGLRFVVVIAILFLKFQHVTAMSSDVDFDQFVSPTASSNITVCTTAGTA
CEKGVILPIWEPQNPSFGDKVARATVYFVALVYMFLGVSIIADRFMASIEVITSQEKEIT
IKRPNGETTTTTVRIWNETVSNLTLMALGSSAPEILLSVIEVCGHGFDAGALGPSTIVGS
AAFNMFVIIGICVWVVPDGEVRKVKHLRVFFVTATWSIFAYIWLYLILAVISPGIVQVWE
GLLTLFFFPICVLFAWVADRRLLFYKYVYKRYRTGKQRGMIIETEGDRPLPSKVDIEMDG
KMLNSHAADFLDGPLGLDLNVKDLDEEETRRDMAKILKELKQKHPDKEVEQLIELANYQV
LSSQQKSRAFYRCQATRLMTGAGNILKKHAADQARKAISLHEVRSDVADNDPVSKIYFDP
GSYQCLENCGTVAVNVLRRGGDLTKTVSVEFRTEDGSANAGSDYEFTEGVVVFKPGETQK
EIRVGIIDDDIFEEDENFLIHLSNVKVLLAEGEEVENPETNHVEAVACLGLPATATVTIF
DDDHAGIFTFEEPVAHVSESVGTMEVKVLRTSGARGVVMVPYKTVEGTARGGGEDFEDTH
GVLEFQNDEIFKCIKVRIIDDEEYEKNKTFYVEMGEPRLMETNDSKATEVAEKEVEEVVP
LTGVDDEEQRIADMGRPMLGDHVKLEIIIEESYEFKNTVDKLIKKTNLALLVGTNSWRDQ
FIEAITVSAGEDDEDEECGEEKLPSCFDYVMHFLTVFWKVLFAFVPPTDYWNGWACFVVS
ICMIGLLTAFIGDLASHFGCTVGLKDSVTAVVFVALGTSVPDTFASKVAAIQDQYADASI
GNVTGSNAVNVFLGIGVAWSIAAIYHNSKGNDFKVDPGSLAFSVTLFTIFAFICVGVLMY
RRRPSIGGELGGPRTPKILTTMLFVSLWLLYILFSSLEAYCHFKAF
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgggacactttcagatctcccccattctctcccttggccttcggttcgtggttgtcata
gcgatcctgttcctcaaattccaacatgtgacggctatgtcctcggacgtggactttgat
cagttcgtgtctcctactgccagcagcaacattactgtgtgcaccacagcaggcacagca
tgcgaaaaaggggtgattctgcctatctgggaacctcagaatccctcgttcggggacaaa
gttgcacgggcgacagtctacttcgtggccctggtgtacatgttcctcggagtatccatc
atcgctgaccgtttcatggcatccatcgaggtcatcacctctcaggagaaagagatcact
attaagagacccaacggagagaccaccaccaccaccgtgcggatctggaacgagaccgtg
tccaacctcacgcttatggccctgggttctagtgcccctgagatcctactgtccgtcatt
gaggtttgtggacacggttttgatgcgggagccttgggccccagcaccatcgtgggcagc
gccgccttcaacatgtttgtcatcatcggcatctgtgtgtgggtggtgcccgacggggag
gtccgtaaggtcaagcacctgcgcgtcttcttcgtcacagccacctggagcatcttcgcc
tacatctggctctacctgatcctggctgtcatctcccctggcatagtgcaggtatgggag
ggcctgctcaccctcttcttcttccccatctgcgtgttgttcgcctgggtcgctgaccga
cgcctgctcttctacaagtatgtctacaagcgctaccgtaccggcaagcagcggggcatg
atcattgaaaccgagggtgaccgtccgctcccgtccaaagtcgacatcgagatggatggg
aagatgctcaactctcacgcggcggacttcctggacgggcctctggggctggacctgaac
gtgaaggacctggatgaggaggagacccggcgcgacatggccaagatcctcaaggagctg
aagcagaagcacccagataaggaggtggagcagctgattgaactggccaactaccaggta
ttgagttcgcagcagaagagcagggccttctaccgctgccaggccaccaggctcatgacc
ggcgctgggaacatcctgaagaagcatgcagccgaccaggcccgcaaggccatcagcttg
cacgaggtccgctctgatgtggctgataacgaccccgtctccaagatctactttgacccc
ggctcctaccagtgcctggagaactgcggcacagtggcagtgaacgtgctacgccgaggt
ggcgacctgaccaagactgtgtcggtggaattccgtacggaggatggatcagccaacgcg
ggctcggactacgaatttaccgaaggggtggtggtgttcaagcccggagagacccagaaa
gagatccgcgtgggtattatcgatgatgacatctttgaggaggacgagaacttcctgatc
catctgagcaatgtcaaagtgctgctggcagagggggaggaggtagagaacccagagacc
aatcacgtggaggcggtggcctgtctcggtctgcccgctacagcaaccgtgaccatcttt
gacgacgaccacgccggcatcttcacgttcgaggagccggtggcgcacgtgagtgagagc
gtgggcaccatggaggtgaaggtgctgcgtacatcgggtgcacgtggggtcgtcatggtg
ccctacaagactgtggagggcacggcacgcggaggtggagaggactttgaagatactcac
ggggtcttggagttccagaatgatgaaatcttcaaatgtataaaggtcagaatcattgac
gacgaggagtacgagaaaaacaagaccttctacgtggagatgggagagcctcgcctgatg
gagaccaatgacagtaaagctacagaggtggctgagaaagaggtggaagaggtggtgccg
ctaacaggagtggatgatgaggagcaacgcatcgctgatatgggtcgacccatgcttggg
gatcacgtcaaacttgaaatcatcatcgaggaatcctatgagtttaagaacactgtggac
aagttgattaagaagacaaacctggccctgctggtggggactaacagctggagagaccag
ttcatcgaggccatcactgtcagcgccggtgaggatgacgaggatgaagagtgcggcgag
gagaagctgccgtcctgcttcgactacgtcatgcacttcctcaccgtcttctggaaggtt
ctgtttgcgttcgtgcccccgacagactactggaacggctgggcctgcttcgtggtgtcc
atctgcatgatcggcctgctcacagccttcatcggggacctggcctcccacttcggctgc
accgtgggcctcaaggactctgtcaccgccgtggtgttcgtggccctggggacctccgtg
ccagacacctttgccagtaaggtggcagccatccaggaccagtatgctgatgcatccatc
ggcaacgtgacgggcagcaacgcggtcaatgtgttcctgggcatcggcgtggcctggtcc
atcgccgccatctaccacaactccaagggcaacgacttcaaggtagacccggggagcctg
gccttctccgtcaccctcttcaccatctttgcgttcatctgcgtgggagtgctgatgtac
cggcggcgaccttcgatcggcggcgagctggggggtccgcggactcccaagatactgacc
accatgctgtttgtcagcctgtggctgctttacattctgttctcctcactggaggcctac
tgccacttcaaggccttctaa
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