Salmo trutta (river trout): 115153731
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Entry
115153731 CDS
T08542
Name
(RefSeq) LOW QUALITY PROTEIN: neuropilin-1a-like
KO
K06724
neuropilin 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
115153731
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
stru04090
]
115153731
CD molecules [BR:
stru04090
]
Proteins
115153731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
F5_F8_type_C
DUF3481
MAM
F5_F8_type_C_2
CUB_animal
DUF3789
Motif
Other DBs
NCBI-GeneID:
115153731
NCBI-ProteinID:
XP_029555183
Ensembl:
ENSSTUG00000021217
LinkDB
All DBs
Position
2:25482016..25580497
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AA seq
929 aa
AA seq
DB search
MHCGLVLFLLMGIFLVAEAFKNDKCGDNIRITNANYLTSPGYPTSYLPSQKCVWVITAPG
PHQRILINFNPHFDLEDRECKYDYVEVRDGVDENGQLVGKYCGKIAPSPVVSSGNQLYIK
FVSDYETHGAGFSIRYEVFKTGPECSRNFTSNSGVIKSPGFPEKYPNNLDCTFMIFSPKM
SEIILEFESFELEPDTTPPTGVFCRYDRLEIWDGFPGVGPYIGRYCGQNTPGRIISYTGI
LALIINTDSAIAKEGFSANFTVLERTVPEDFDCSDPLGMESGEIASEQIVASSQYNPGWS
PERARLNYYENAWTPGEDNNKEWIQVDLGFLRFVSAVGTQGAVSQETKKTYWVKSYKVDV
SSNGEDWITLKEGSKQKVFQGNTNPTDVARTMLPKPTLTRFIRIRPVAWETGIALRFEVY
GCKISEYPCSGMLGMVSGLITDAQITASSHTDRSWVPENARLLTSRSGWTLLPQPQPFTS
EWLQVDLGEEKLVRGLIIQGGKHRENKVFMKKFRLGYSNNGSDWKMVQDASGNKPKIFEG
NQNYDTPELRTVEPLLTRYIRVYPERSTPAGMGLRLELLGCEIEAPTIPPTTPAPTTVPS
DDCDDDQASCHSGTGDDYEVTGGTTMPEAMTDVDTIPAFLWFACDFGWANNPSFCGWTSE
DSGFRWQIQSSGTPTLNTGPNMDHTGGSGNFIYTLATGAQETEVARLVSPGVTVGQSDLC
VSFWYHMFGSHIGTLHIKQRKETVDGMADILLWTVSGHQGNRWREGRVLVPHSSKPYQVV
IEGLVERKSWGDIAVDDIKILDNLNMADCKDPDVPTEPMLPEDRFNEITVVDITDFPEIV
ENNEILNGVSGGAGNMLKTLDPILITIIAMSALGVFLGAICGVVLYCACSHGHMADRNLS
ALENYNFELVDGVKLKKDKLNSQKSYTEA
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgcattgtggattagtgctgttcctcttaatgggaatcttcttagtcgctgaggctttc
aaaaatgacaagtgtggggacaacatcagaataacgaatgcgaattacctcacctcgcct
ggctatccgacatcatatttgccatctcagaaatgcgtttgggtgataacagcgcctgga
cctcaccaaagaattctaatcaactttaacccgcattttgatctcgaggacagggagtgc
aagtatgactatgtggaggtgcgtgacggcgtggatgagaatggtcagctggtggggaag
tactgtgggaagatcgccccgtcacccgtggtgtcttctgggaaccagctctacatcaag
tttgtgtccgactacgagacccatggagcaggcttctccatccgctatgaggtcttcaaa
acaggtccggaatgttccaggaacttcacgtctaacagcggggtgataaagtcacctggt
ttcccggagaagtatcccaacaacctggactgcaccttcatgatcttctcccccaagatg
tccgagatcatcctggagttcgagagcttcgagctggagcctgacaccactcctcccacc
ggggtcttctgtcgatacgataggctagagatctgggacggcttccctggagttggtccg
tacattgggcggtactgtggccagaacacccctggtcgtatcatctcctacacgggcatc
ctggccctgataatcaacacagacagtgccatcgccaaggagggcttctctgccaacttc
actgtgctggaacggactgtgccagaagactttgactgttcagacccgttgggtatggag
tcaggggagatagcatcagagcagatcgtagcttcgtcccagtacaaccctggctggtcc
ccggagcgagccagactcaactactatgagaatgcatggacaccaggagaggacaacaac
aaagagtggatacaggtggacttgggtttcctccggttcgtgtcggccgtcggaacacag
ggggccgtttcccaggagaccaagaagacctactgggtcaagtcctacaaggtggacgtc
agctctaacggagaagactggatcacactgaaggagggttcaaaacagaaggttttccaa
gggaacaccaaccccactgacgtcgccaggacgatgcttcccaaacccacgctcacccgc
ttcatccggatccggcccgtcgcctgggaaacaggcatcgctctgcgcttcgaggtgtac
ggctgtaaaatatcagagtatccatgttcaggcatgctaggcatggtatcgggcctgatc
actgatgcccagatcacagcttcgtcccacacggaccggagctgggtacccgagaacgcc
cgcctgctgaccagccgctccgggtggaccctgctgccccagccccagcccttcacctca
gagtggctacaggtggacctgggggaggagaagctggtacgagggctcatcatccaggga
gggaaacacagagagaacaaggtgttcatgaagaagttcagactgggatatagtaacaac
ggatctgattggaagatggtccaggacgccagcggcaacaagccaaagattttcgagggg
aatcagaactacgatacaccagagctgaggaccgtggagcccttgctgacccgatacatc
agggtttacccagagaggtccacccctgctgggatgggcctgcgtctcgagctcctcggc
tgtgagatcgaagctcccacaatcccccccaccacgcccgcccccaccaccgtcccatca
gacgactgtgatgatgaccaggccagctgccacagtggaacaggtgatgactacgaagtg
acaggtggaaccacaatgccagaggctatgacagatgtggacaccatcccagcattcctg
tggtttgcgtgtgactttggctgggccaacaacccctcgttctgcggttggacctcagag
gacagcggcttcagatggcagatacagtccagcggcacgcccacgctcaacactggaccc
aacatggaccacacaggtggatctggtaatttcatctacaccctagcgacaggcgcccag
gaaacggaggttgctaggctggtcagtccgggggtaacagtcggtcagtctgacctgtgc
gtctcgttctggtaccacatgtttggctcgcacatcggcacgctacacatcaaacagagg
aaggagacggtggacggcatggccgacatacttctgtggaccgtgagcggtcaccagggc
aaccgctggagagagggacgcgtgctggtgccgcactccagtaaaccctatcaggtggtg
attgaagggttggtggagaggaagagctggggtgatatcgctgtggacgatatcaagatc
ctggacaatctgaacatggctgactgcaaggatcctgatgttcctacagagcccatgctg
cctgaagacagattcaatgaaatcacagttgtggacatcacagacttccctgagatcgtg
gagaacaatgagatcctgaacggtgtcagtggcggggcaggtaacatgctgaagacactg
gaccctatcctcatcaccatcatcgctatgagcgccctaggggtcttcctgggggccatc
tgtggggtcgtcctctactgtgcctgctcacatggccacatggctgacaggaacttatcc
gctctggagaactataactttgagctggtggatggagtcaagctaaagaaggacaaactc
aattcacagaagtcatatacagaggcgtga
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