KEGG   Salmo trutta (river trout): 115154511
Entry
115154511         CDS       T08542                                 
Name
(RefSeq) bromodomain and WD repeat-containing protein 3-like isoform X1
  KO
K11798  bromodomain and WD repeat domain containing protein 1/3
Organism
stru  Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:stru00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:stru04121]
    115154511
Ubiquitin system [BR:stru04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     115154511
SSDB
Motif
Pfam: WD40 Bromodomain WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st WDR55 Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_DCAF12 Beta-prop_SPT8 Beta-prop_HPS5 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_VPS8 Auxin_resp
Other DBs
NCBI-GeneID: 115154511
NCBI-ProteinID: XP_029556652
Ensembl: ENSSTUG00000029632
LinkDB
Position
19:complement(37055320..37086673)
AA seq 1773 aa
MAEEQCSEIEAELYYLIARFLQSGPCKKSAQILVEELEEYELIPKRWSWDGKQYKRNFQD
WVILNQHIPADYLLRVCQQIGPLIDKEAPPSVPGVQTLLGLGRQSLLRTAKSCSHTEWSG
TAVAALHRGRPPEPPVSFGKPPSIVSIMGARQATGTARFGHALPSYTYQHVKMHRRILGH
LSSVYCVAFDRSGRRIFTGSDDCLVKIWSTDDGRLLSTLRGHAAEISDMAVNYDNTLIAS
ASCDKVIRVWCLRTCAPITVLQGHAASITSIQFCPAVKGPMRYLASTGADGMVCFWQWHS
LSMKFVDRPVKFIERSRPGVQISTSSFSCGGMFLATGSTDHVIRVYYLGSETPMKLSELD
SHMDKVVVVQFCNNSYSLRFVSGSRDGTARIWHYQQQEWKSITLDIATRLPGTAVVNGED
KTKLVPTMVAWDRGDRTVVTAVSNYLLKVWSSTTGQLLHVLSGHDDEVFVLEAHPFDHRI
MLSAGHDGNIYMWDLSKGSKIRNFFNMIEGQGHGAVFDCKFSADGQHFACTDSHGHLLIF
GFGCSRPYEKIPDQMFFHTDFRPLIRDANNFVLDEQTQQAPHLMPPPFLVDVDGNPHPTH
YQRLVPGRESCKDEHLVPQLGYMANGDGEVVEQVIGQQTAEEGHGESPLDVLIRQLQNQP
DERRDQDGLPEGEGAVEGAEVVGSPPNVGLRRSGQVEGVRQMHHNAPRSQMATERDLLAW
SRRVVVNEVQQGVLRVMEETRRAKGEVECSLYNTERRKKPVLSAPKTEEQAPCKRSLRRT
QRKKKKQTRPAPAYQTRSARDRRPVDRGRNSDSQMDSDSDGEAEEQAEASDASSDGEAQW
QSDSSSSVSSSDYSDWTADAGINLQPPKRTSRRQVRPPGGSSSSEEAEGQGEEARRKQAE
EKKKPKQTKQKKPSSSLSLAGCDAEEWLPPSWIMETIPRRSPFVPQMGDELMYFRQGHQA
YVRAVRRAKAYSINPQKQSWNKLNLRDQESVKVVGIKYEVGPPTLCCLKLAFLHPISGKM
TNESFSLKYHDMPDVIDFLVLQQFYDEAKEHNWQTGMRFRSIIDDAWWFGSVEDQQPLQP
EYPDSLFQCYTVKWDNSEREKMSPWDMEPIPDEAELPEDVGDGVVVTEEEVKARLYSPQE
GEWGAHTRDEDCQRVIFGIDELLTLDLAKAFASPVDLRDYPLYCTVVAYPTDLSTIRRRL
ENRFYRRISALMWEVRYIEHNARTFNEPQSPIVAAAKVVTDVLLRYIGDQSCTDILDLYH
KVKTELSSGEDEVKHKDTAEVDMDSDTPGTSTGQQRANPSPKKRGVVLDVRAWRGQCREL
LRRMMDGPDSEPFRQPVDLFTYQDYRDIIDTPMDLGTVTETLIIGNYENPMEFAKDVRLI
FSNSKAYTPNKKSQIYTMTLSLSAFFERQIISIISDYKSAVQNQRRKSRQSVSYRKRLHS
GGSSPPTSRPSSPKGKHKSRKKPTPKELQTSSKKRSRRPSQASETSSVIVDEDSQPSSSS
NSGTGSHSGGPGADRVTRSQTTPVKNSDGNRPLTNGTRQSHRRRVLQEDEGEGSGGSNSS
SSSSSSSSSSSSSSSSSSSDSESDSESEVGKFVDGGDHDYSKAPRLKTGHKVKGKMAVSG
KRMLEEEEAPERAKRARVQAEEQEEEDEDEQGEDEEEGEQPQPPQQEEGGEPEDEEEEPE
DEEEPEEKEESEEEEDSEQGEGGAEGGQKSSSRSKSGQVNTRNQGRRTVLYNDESDDESG
TTEDPLNLGMSRSGRVRRMTEKARVSHLMGWKH
NT seq 5322 nt   +upstreamnt  +downstreamnt
atggcagaagaacagtgttcagaaatcgaagctgaattgtattacctcattgctagattt
ctccagtcgggaccgtgtaaaaaatcggcacagatactggttgaggaactagaagagtat
gagttgatcccgaaacgatggagttgggacggcaaacaatataaacgaaacttccaagac
tgggtgatcttgaaccagcacatccctgcagactacctgctgagagtatgccagcagata
ggtcctctcatagacaaggaggccccacctagtgtccctggggtccaaaccctcctgggc
ttgggaaggcagtctttgcttcgcacagctaaaagttgtagccacacagaatggagcgga
actgctgttgctgcgctccaccggggtcgccccccagaaccaccagtcagctttgggaag
ccccccagcatcgtgtccatcatgggtgctcgccaggctactggcactgcccgcttcggc
catgctctgccatcctacacctatcagcatgtgaagatgcacaggcgcatcctgggtcac
ctgtcctctgtgtactgtgtggctttcgaccgcagtggcagacggatatttacaggttct
gatgactgtctggtaaagatatggtctacagatgatggccggctgctgtccaccctgcgt
ggccacgcggccgagatctccgacatggcggtgaactacgacaacacgctaatcgcctca
gccagctgtgacaaggtcatcagagtgtggtgcctgcgcacctgcgcccccatcactgtg
ctgcagggccatgcagcctccatcacctccatacagttttgtccggcggttaaaggacca
atgcggtacctggcctccaccggagcagacggcatggtgtgtttctggcaatggcactcg
ctcagcatgaagttcgttgaccggccagtcaagttcattgagcggtcaaggcctggggtc
cagatctccacctcctccttcagctgtggtgggatgttcctggccacaggcagcacggat
catgtaatcagggtgtattaccttggctctgaaacacccatgaagctctctgagttggac
tctcacatggacaaagttgtggtggtccagttttgtaataacagttacagcctaaggttt
gtgagtggtagtcgtgacggcacagccaggatatggcattaccagcagcaggagtggaag
agcattactctggacatagccactagactgccagggactgctgttgtgaatggcgaggac
aagaccaagctggtgccgacaatggtggcctgggaccgtggtgaccgcactgttgtcaca
gcggtctctaactacctactcaaagtgtggagctccaccaccggccagctgctgcatgtg
ctgtctggtcatgatgatgaggtgtttgtcctggaggcccacccctttgaccaccgcatc
atgctctctgccggccacgacggcaacatctacatgtgggacctctccaagggatccaag
atccgcaacttcttcaacatgattgagggccaaggtcacggagctgtatttgactgtaag
ttctcagctgatggacaacattttgcctgcactgactcccatggccacctgctcatcttt
ggcttcggctgcagcagaccctatgagaagattcctgaccaaatgttcttccacactgac
ttcaggccgctaatccgagatgccaataactttgtcctggacgagcagacccagcaggcg
ccccaccttatgccccctcccttccttgtggatgtggacggtaacccccaccccacccac
taccagcgcctggtgcccggcagggagagctgcaaggatgagcatctggtgccccagctt
ggctacatggcgaatggtgatggtgaggtggtggagcaggtgatcggccagcaaacggcg
gaggagggtcacggagaaagccctttggatgtcctgatcagacagttgcagaaccaaccg
gatgagaggcgggaccaagatggactgcctgaaggagagggtgctgttgagggagcagag
gtagtgggatcgccccctaacgtgggcctgaggaggagtggtcaggtggagggagtgcgt
caaatgcaccacaacgcccctcgcagtcagatggccacggagagggacctgctggcctgg
agcaggagggtggttgtcaacgaagtccagcaaggggtcctccgggtgatggaggagacc
aggcgggccaaaggtgaggtggagtgttccctctacaacacagagaggaggaagaaacct
gtactcagtgctcccaagactgaggagcaggctccatgcaagcgctccctgcggcgaacc
cagaggaagaagaagaagcagaccagacctgcaccagcgtaccagacccgctcagcacga
gatcgccgccctgtggatagggggaggaactctgacagccagatggactccgacagcgat
ggagaggcagaggagcaggcagaggccagtgatgcttcctctgatggggaagcacagtgg
cagagtgacagcagttccagtgtctcctccagtgactactctgattggacagctgatgcg
gggatcaacctccagccccccaagcgtaccagcagaaggcaggtgcggccgcccggtggc
tccagcagctcggaggaggcggagggccagggagaggaggccaggaggaagcaggcggag
gagaagaagaagcccaagcagaccaaacagaagaaacccagttcgtctctgtctctggct
ggctgtgacgcggaggaatggcttcccccttcctggatcatggagaccatcccccgccgc
tcgccttttgtgccacagatgggtgatgagctgatgtacttcaggcagggccaccaggcc
tatgtcagggcggtgcgcagagccaaggcctacagcatcaaccctcagaaacagtcctgg
aacaagctgaacctcagggaccaggagtctgtgaaggtagttggtatcaagtatgaagtg
ggcccccccaccctctgttgcctaaaactggccttcctgcaccccatctcaggcaaaatg
accaatgagtcgttctccctaaagtaccatgacatgccggatgtcatcgatttcctggtg
cttcagcagttctatgacgaagctaaagagcacaactggcagacaggtatgcgcttccgg
agcatcatcgatgacgcctggtggtttggctcagtggaggaccaacagccactccagcca
gagtacccagacagcctgttccagtgctacactgtcaagtgggataatagcgagagggag
aagatgagcccttgggacatggagcccattcctgatgaagcggagttgccagaggatgtt
ggtgacggggtggtggtgacggaggaggaggtgaaggctcgcctctacagcccccaggag
ggggagtggggggctcacacacgggacgaggactgccagagggtcatctttggcatcgac
gagctgctcacactggacttggccaaggcgtttgcgtcaccagtggacctgcgggactac
cctctctactgcactgtggtggcctaccccactgacctcagcaccatccgcagacggctg
gagaaccgcttctacaggaggatctcggctctgatgtgggaggtgcgctacatcgagcac
aacgcccgcactttcaacgagccccagagccccatcgtggcagcagccaaggtggtgact
gacgtgctcctccgctacattggggaccagagctgcacagacatcttagatctgtaccac
aaggtgaagacggagctgagcagtggagaggatgaggtgaaacataaagatactgctgag
gtggacatggactctgacactccagggacctccacaggacaacagcgggccaatcccagt
cctaagaagcgtggggtggtgttagatgtgcgtgcttggcggggccagtgtcgggaactg
ctgcggcgtatgatggacggccctgactctgagcccttcagacagcctgtggacctcttc
acctaccaagactatcgagacatcatagacactcccatggacctggggactgtaacagag
actctgatcatcgggaactacgagaaccccatggagtttgccaaagatgtccgcctcatt
ttcagcaactccaaggcctacacgcccaacaagaagtcacagatctacaccatgaccctg
agcctatcagccttctttgaaagacaaatcatctccatcatctcggattacaagtctgca
gtccagaaccagcggaggaagagtcgccagagtgtcagctacaggaagagactgcacagt
ggaggcagctcccctcccaccagccgaccctccagtcctaaagggaagcacaagtcaagg
aagaaacctacaccaaaagaattacagacctcatccaagaagcggtctcgcaggccatct
caagcgtcagagacgagcagcgtgatagtggatgaggacagccaaccctcgtcatcgtct
aactcagggacaggaagccacagtgggggtccaggggctgaccgtgtcacccgcagccaa
accactcccgtcaagaactcagacggtaacagacctctcactaacggcaccagacagagc
cacaggagacgagtgctgcaggaggatgagggagagggatctggaggatccaatagctca
tcttcgtcatcgtcttcctcgtcttcctcatcatcctcctcctcctcctcctcatcagac
agtgagtcggacagtgagtcggaggttggaaagtttgtggacgggggagatcacgactac
agcaaagctccccgcttaaaaacgggccacaaagtcaagggcaagatggccgtctctggg
aagaggatgctggaagaagaggaggctccagaaagagccaagagagcacgagtccaggca
gaggagcaggaagaggaggatgaagacgaacaaggtgaagacgaggaagagggggagcag
ccacagccgccgcagcaagaggaagggggggagcctgaggacgaagaggaggagcctgag
gacgaagaggagcctgaggaaaaggaggaatcagaagaggaggaggactcagagcagggt
gagggtggggcagagggcggtcaaaaaagcagcagccgcagtaagtctggtcaggtgaac
actcggaaccagggccgcaggacagtgttgtacaacgacgagtcagacgacgagtcaggg
accacagaggacccactcaacctaggcatgtcccgctcaggacgggtacggcgcatgacc
gaaaaggcccgggtcagccaccttatgggctggaaacactga

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