Salmo trutta (river trout): 115160085
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Entry
115160085 CDS
T08542
Symbol
ddx4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115160085 (ddx4)
Enzymes [BR:
stru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115160085 (ddx4)
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Gene silencing
piRNA pathway
115160085 (ddx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CCDC154
Utp25_C
CMS1
Motif
Other DBs
NCBI-GeneID:
115160085
NCBI-ProteinID:
XP_029566236
Ensembl:
ENSSTUG00000011345
UniProt:
A0A673Y4E1
LinkDB
All DBs
Position
23:42034335..42045428
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AA seq
653 aa
AA seq
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MDNWDEVTTSNESGMSSWTSGGQSSSFGRPTDNKVSSWNSGGGGFGGGGRGRGSRGGGGD
FRSFSSGADENGDEDKGSCWNTGGGGGFRGRGRGGGRGSRGGGFQNGDDGNDGGFGGSRG
GRGGRGGFRSGGGDGGGFGGGGYRGRDEEVFSKGSTMDGEGGGDGGNPGPPRVTYVPEAL
CEKESSIFAHYESGINFDKYDDILVDVSGSNPPTAIMGFEEAALCESLNRNVIKSGYKKP
TPVQKHGIPIIAAGRDLMACAQTGSGKTAAFLLPILQQLMVDGVAASQFSEIQEPEVIIV
APTRELINQIYMEARKFAHGTCVRPVVVYGGISTGHTIREILKGCNVLCGTPGRLMDMIG
RGKIGLSKLRYLVLDEADRMLDMGFEPAMRKLVASPGMPAKEDRQTLMFSATYPEDIQKL
AADFLKKDYLFLAVGVVGGACSDVEQVVVQVTKFSKRDQLLEILKTTGSERTMVFVETKR
QADFIATFLCQENVNTTSIHGDREQREREQALGDFRSGKCPVLVATSVAARGLDIKDVQH
IVNFDLPNNIDEYVHRIGRTGRCGNTGRAVCFFDPEVDSNLARSLVKVLSGAQQEVPKWL
EEAAFSAYGTTGFNPGGRTFASTDSRKGGSFQRDGASHLAAALSSGADDDEWE
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggacaactgggatgaggttaccacaagtaatgaaagtggaatgagctcgtggaccagt
ggtggccaaagttccagttttgggagaccgactgataataaagtcagttcctggaacagt
ggaggtggtgggtttggtggtggcggcagaggccgagggtccaggggaggtggtggagac
ttcaggagtttctcttcgggagctgatgagaatggggatgaagataaaggcagctgctgg
aacactggtggaggaggcggcttcaggggaagaggcagaggaggtggcagaggatcaagg
ggaggaggcttccaaaacggggatgatggcaacgatggcgggtttggaggtagtcgggga
ggtagaggtggccggggaggcttccgatcaggtggtggtgatggaggaggatttggcgga
ggaggttatcgtggacgagatgaggaagttttctctaaaggctcaaccatggatggggag
ggtggtggagatggtggcaatccaggtcccccaagggtgacctacgtgcccgaagccctc
tgtgagaaggagtcgtctatttttgctcattatgagtcaggcatcaactttgacaagtac
gatgacatcttggtcgatgtcagcggcagcaatccgccaacggccatcatgggttttgaa
gaggctgccctgtgtgaatctctgaacaggaacgtcattaagtctggctataagaagccc
accccagtacagaagcatggcattcccatcattgctgctggccgggacctcatggcctgt
gcccagactggatctgggaaaacggctgcattcctactgcccatcctgcagcagctgatg
gtggacggcgtggcagctagtcagttcagcgagatccaggagccagaggttattatagtg
gccccaaccagggagttgatcaaccagatctacatggaagccaggaagtttgcccatgga
acttgtgtgcgtccagtggtggtttatggtggtataagcaccggtcacaccattcgcgag
atactgaagggctgcaatgtgctgtgtgggactccaggaagactgatggacatgattgga
agaggaaagattggattgagcaagctgcgttacctggtgctggacgaggctgacaggatg
ctggacatgggctttgagcctgcgatgcgcaagctggtggcgtccccaggcatgccagct
aaagaggaccgccagacccttatgttcagcgctacctaccccgaggacatccaaaaactg
gctgctgacttcctgaagaaggactatctgttccttgctgtgggcgtggtaggcggagcc
tgtagtgacgtggagcaggtcgtggttcaggtgaccaagttctccaaaagagaccaacta
ctggagatcctcaagactacagggtctgaacgcacaatggtctttgtggaaaccaagagg
caggctgactttatcgcaacgttcctgtgtcaggagaatgttaatactactagtattcat
ggtgaccgtgagcagagggagcgtgaacaggcgctcggtgacttccgctcaggaaagtgt
cctgtcctggtggccacctctgttgctgcccgcggactggacatcaaggatgtccaacac
atagtcaactttgacctccccaacaacattgatgagtatgtccaccgcatcgggagaacg
ggtcgctgtgggaacaccgggagagctgtgtgtttctttgacccggaggtcgacagcaac
ctggcacgctccctggtcaaagtcctgtctggggcccagcaggaggtacccaaatggctg
gaggaagctgcgttcagtgcttatggcactacagggttcaacccaggtgggagaaccttc
gcctccactgatagcaggaagggtggatctttccagagagatggggcaagtcatctagct
gctgccctgagcagtggcgcagacgacgacgaatgggagtga
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