Salmo trutta (river trout): 115160726
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Entry
115160726 CDS
T08542
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115160726
Ion channels [BR:
stru04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
115160726
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
PFF1_TM
GPHH
Zip
ATP-synt_B
IQ
New_glue
Motif
Other DBs
NCBI-GeneID:
115160726
NCBI-ProteinID:
XP_029566920
Ensembl:
ENSSTUG00000050918
LinkDB
All DBs
Position
24:13548837..13601109
Genome browser
AA seq
2000 aa
AA seq
DB search
MAQLLVPPGPDSFRPFCRESLDAIERRIADENAKKSKAKPNNNDDDGPKPSSDLEAGKSL
PLIYGDIPKGLVSTPLEDLDTFYSNQKTFIVLNRGKAIFRFNATPALYVLNPFNPLRRIS
IKVLVHSLFSMVIMLTILTNCAFMTLSQPPDWAKNVEYTFTGIYTFESLIKILARGFCVG
KFTFLRDPWNWLDFCVIVMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALI
QSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRNKCLRIPLNSTDLFDDSFDFNGTDLNK
TKSFNWTYYMNDPKNYYYLPGKKDALLCGNGSGAGLCPEGFWCIKAGRNPDYGYTSFDTF
SWAFLSLFRLMTQDYWENLYQQTLRAAGKPYMIFFVLVIFLGSFYLINLILAVVAMAYDE
QNQATIEEAQQKEEEFQKLKKQQEDAQAAAAVTAAESGEFSERGELTDTSSEASKLSSKS
AKERRNRRKKKKQREEEERGDNDKFHRSESEGSVQKSRFRFSIDASNLLNYDMRCSTPHQ
SFLSIRGPLFSSRRNSQASLFSFRERAQDMGSENDFADDENSTFEDNDSRRGSLFVPRRS
DRRSSNLSQNSMSSHVLLPANGKKHSSVDCNGVVSLVGGASLPTSPEGLLLPEVTVDKAS
TDDNGNTTETEYRKAQCESYQASMNFLEDPGARQRAFSVASVITNTMEELEESRQECPPC
WYKFSNTFLIWDCCPAWLRIKKTVKMIVMDPFVDLTITICIVLNTVFMAMEHHPMSGDFK
KMLSVGNLVFTGIFTAEMCFKIIALDPYCYFKEGWNIFDGIIVSLSLMEIGLANVSGMSV
LRSFRLQLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNY
RDCVCKISTDCTLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQSMCLIVFMMVM
VIGNLVVLNLFLALLLSSFSADNLAATDDDSEMNNLTVAIGRIHQGIAFVKALVCRSFHS
ICLRKKKGSLDDLHRTNYNSNHTTVEIMKDPEYVKDDNGTTGGVGMGVGSNAAGKYIVND
NTDYMQFIHNPSLTVTVPIAVGESDFENLNTEDFSSDSSDIEGSKEQLAKDRPLSSSEGS
TVDIRAPGEREGSVDMEPEESMEAEGCFTDGCVRRFQCCQVNVEEGKWKMWWTLRKTCFR
IVEHNWFESFIIFMILLSSGALAFEDIYIEQRKTIKTLLEFADKIFTYIFILEMLLKWVA
YGFAKYFTNAWCWLDFLIVDVSLVSLVANALGYAELSAIKSLRTLRALRPLRALSRFEGM
RVVINALLGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKYYHCINMTTSDRFEVRDVANK
TECLALTGTHWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRNLDDQPDYEVNL
YMYLYFVVFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSK
KPQKPIPRPVNKFQGFVFDFITKQAFDIVIMILICLNMVTMMVETEDQTDDIRKILYKIN
LVFIVMFTGECILKMISLRQYYFTIGWNVFDFIVVILSIIGMFLSELIEKYLVSPTLFRV
IRLARIGRILRLIKSAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKK
ESGIDDMFNFETFGNSMICLFQITTSGGWDLLLAPILNKGEPDCDSRKEHPGSTYKGGDC
GNPPVAIIFFVSYIIICFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWEKFD
ARATQFMEYDKLSDFADALDPPLRISKPNKIQLISMDLPMVSGERIHCLDILFAFTKRVL
GEGEGLDILRGQMEERFMASNPSKVSYEPITTTLRRKLEDMSALVIQRAFRRYLLKRIVK
RASAMYKEKMQSGGTLLDKELLVIDKFNEISTSDRTDMTPSTASPPSYDSVTKPEKNKYE
KDKRKKEVKEKKKYMDVGKI
NT seq
6003 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgcttgtaccgccaggaccagacagcttccgcccgttttgtcgtgagtcc
ctcgatgccatcgagaggcggatcgctgacgagaacgccaaaaagtccaaggcgaagccc
aacaacaatgacgacgacgggcctaagcccagcagtgacctggaggcgggaaaatcactg
ccactcatatatggggacattcccaaaggattggtgtccacaccactggaggatttggac
accttctacagcaaccagaaaacctttatagtgttgaaccgagggaaggccatcttccgc
ttcaacgccactcctgccttgtatgtcttaaaccccttcaaccctcttagaagaatatca
attaaggttttggtacactcattgttcagcatggtaatcatgttgactatccttaccaac
tgtgcgtttatgaccctgagtcagcccccggactgggcaaagaatgtagagtacacattc
actggaatctacacatttgaatctcttataaaaattctggcaaggggcttctgtgtaggg
aagtttacctttctccgagacccatggaactggttggatttctgtgttattgtcatggca
tatgtcacagagtttgtggacctgggcaatgtctcagcactgagaactttcagggttctc
cgagctttgaaaactatatcggtcatcccaggcctcaagaccattgtgggagcgctgatc
cagtcagtgaagaaactatcagatgtgatgatcctcactgtattctgcctaagtgtcttt
gccctggtagggctgcagttgttcatggggaatttaagaaacaaatgtttaaggatccct
cttaactcaaccgacctcttcgatgattcattcgactttaatgggacggacctcaacaag
accaagtcgttcaactggacctattacatgaacgatcccaaaaattattactacctccca
ggtaaaaaagatgctttgctttgtggaaatggcagtggtgctgggctgtgcccagaggga
ttctggtgcatcaaagcgggccggaacccagattacggctacaccagctttgacacgttc
agctgggccttcctgtctctgttcagactgatgactcaggactactgggagaacctctac
cagcagaccctgagggctgctgggaagccatacatgatcttctttgtgttggtcatcttc
ctgggctccttctaccttatcaacctaatcctggctgtggttgccatggcctacgacgag
cagaaccaggccaccattgaggaggctcagcagaaggaggaggagtttcagaagctgaag
aaacagcaggaggacgcacaggcagcggcagcggtgacagcggctgagagcggggagttc
agtgagagaggggagctcactgacacctcctcagaggcctccaaactcagttccaagagc
gccaaagagagacgcaacaggcgcaagaagaaaaagcagagagaggaggaggagagaggg
gacaatgacaagtttcacaggtctgagtctgagggcagtgtgcaaaagagtcgtttccgc
ttctccatagatgcctccaacctgctcaactacgacatgagatgttccacaccacaccag
tccttcctgagtatccgtggacccctgttctcatccagacgaaacagccaggcaagcctc
ttcagcttccgggaacgagcgcaagatatgggctcggagaacgactttgccgacgacgag
aacagtactttcgaggacaacgacagtcgccggggatctctgtttgttccccggcggagc
gaccggcgctccagcaacctcagccagaacagcatgtcgtcacatgtcctgttgccggcc
aatgggaagaagcacagctccgtggactgcaatggggtggtgtccctggtgggcggggct
tcacttcccacatcacctgagggactccttctgccagaggtgacagtagataaagcctct
accgatgacaacggcaacactacggagacagagtacagaaaggcccaatgtgaatcgtac
caggcctctatgaacttcctggaggacccaggggccaggcagagggccttcagtgtagct
agtgttataactaatactatggaagaacttgaagagtcgagacaggagtgccctccttgc
tggtacaagttctccaacactttcctcatctgggactgttgtccggcatggctgaggatc
aagaagacagtcaagatgatcgtgatggacccttttgtagacctgactattaccatatgt
attgttctgaacacagtgttcatggctatggagcaccacccaatgtctggggatttcaaa
aaaatgctttctgtgggaaacctggtgtttacaggtatcttcacagctgagatgtgtttc
aagattattgctttggatccgtactgttattttaaggaaggctggaatatatttgatggt
atcattgtcagtttgagcttgatggagattggcttggccaacgtgtctggaatgtctgtc
ctcagatcattccgattgcagctgagagtattcaaactggccaagtcttggcccacactg
aacatgctgatcaagatcattggtaactcagtgggggctctgggtaacctcaccctggtc
ctggccatcattgtcttcatcttcgcggtggtgggcatgcagctgtttgggaagaactac
agagactgtgtgtgtaagatctctacagactgcacactgccccgctggcacatgcatgac
ttcttccactccttcctgattgtgttccgggtgctgtgtggggagtggatcgagaccatg
tgggactgtatggaggtggctggccagagcatgtgtctcatcgtcttcatgatggtcatg
gtcatcgggaacctggtggtcctgaatctgttcctggccctgctgctgagctcgttcagt
gctgataacctggcggccacggatgatgacagcgagatgaacaatctgacggtggccata
ggccgcatccaccagggcatcgcctttgtcaaggccttggtgtgccgctccttccacagc
atctgtctgaggaaaaagaaggggagcctggatgacctccacagaaccaactacaactcc
aaccacaccactgtggagatcatgaaagaccctgaatacgtgaaggatgacaatggcacc
accggtggggtaggcatgggagtgggtagcaatgcagcagggaaatacatagtcaacgac
aacactgactacatgcagttcatccacaaccccagtctgaccgtcacggtgcccatcgct
gtgggggagtcggactttgaaaatctcaacactgaggacttcagcagcgattcctcggac
atagagggaagcaaagagcagctagctaaagaccgtccactgagctcatcagagggcagt
acagtggacatcagggccccaggagagagagagggctcggtggacatggagcctgaggag
tccatggaagctgaaggatgcttcactgatggctgtgtccgtagattccaatgctgccaa
gtgaacgttgaggagggcaagtggaagatgtggtggacattgaggaagacctgcttcagg
atagtggagcacaactggtttgagagctttatcatcttcatgatcctgctcagcagtgga
gcactggcatttgaggacatctacatcgaacagaggaagaccattaagacattgttggag
tttgcggacaaaatcttcacctacatcttcatcctggagatgttgctgaaatgggtggcc
tatggattcgccaaatacttcaccaacgcctggtgctggttggactttcttattgttgac
gtctctttggtcagccttgtggccaacgccctgggctacgctgagctgagtgccatcaag
tccctgaggacgctgcgagcgctgaggcccctgagagcgctgtcccgcttcgagggcatg
agggtggtcataaacgctctgcttggagccatcccctccatcttcaatgtgctgctggtc
tgcctcatcttctggctcatcttcagcatcatgggtgtcaacctgtttgcagggaaatac
taccattgtatcaacatgaccacgagtgatcgcttcgaagtcagagacgtggctaacaag
acagaatgtttggctttgacaggtacccactggaagaatgtcaagatcaactttgataac
gtgggagcaggctatctggcactgttacaagtggctacattcaaaggctggatggacatc
atgtatgcagctgtggactctcgcaatttggatgatcaacccgactacgaagtgaatctg
tacatgtatctgtactttgtggtattcatcatatttggatccttcttcacactcaatctc
ttcattggtgtcattatagacaacttcaatcagcaaaagaaaaagtttggaggtcaagac
atcttcatgacagaggaacagaagaaatactacaatgctatgaagaagcttggctcaaag
aaaccccaaaagcctatccctaggccagtgaacaagtttcaagggtttgtctttgatttc
attacaaagcaagccttcgacattgtcatcatgattcttatatgccttaatatggtcacc
atgatggtggagacggaagaccagacagacgacattcgtaaaattctctacaagatcaac
ctggtgtttattgtcatgttcaccggggagtgtattctgaagatgatctcactccgacaa
tactattttaccattggttggaatgtatttgactttatcgttgttatcctgtcgataatt
ggtatgtttctctcggaactgatagagaagtacttggtttcaccaaccttattccgagtc
attcgactggcccgaattggtcgcatccttcgcctcatcaagagtgccaagggaatccgt
acactcttgtttgcgttgatgatgtcacttcctgcattgttcaacattggtcttctgctc
ttcttagtgatgtttatctatgcaatctttggcatgtcaaactttgcatacgtcaagaag
gagtctgggattgacgacatgttcaactttgagacgttcggcaacagcatgatctgcctg
ttccagatcaccacgtctgggggctgggatctcctgctggcccccatcctcaacaaggga
gagccagactgcgacagccggaaagagcacccaggaagcacgtacaaggggggagactgt
ggaaacccccctgtggccattatcttctttgtgagctacataatcatctgtttccttgtt
gtggtcaacatgtacattgctgtcattctagagaacttcagtgtggccactgaggagagc
gctgagcccctgagcgaggatgactttgagatgttctatgaggtctgggagaagtttgat
gcgcgagccacccagttcatggagtatgacaagctgtcagactttgctgatgccctagac
cccccgctacgcatctctaagcccaacaagatccagttgatctcaatggatttacccatg
gtgagtggggagcgcatccactgcctggacatcctgtttgccttcaccaaacgtgtcctt
ggcgagggggaaggcttggacatcctcaggggtcaaatggaggagcgatttatggcctcc
aacccctccaaggtgtcctacgaaccaatcaccaccacactgcgccgcaagctagaggac
atgtctgccctggtcatccagagagctttcagacgatatcttctcaagcgtattgttaag
cgggcctctgccatgtacaaggagaaaatgcaaagtggaggcacgctccttgataaagag
cttctcgtcatagacaaatttaacgagatctctacttcagacagaactgacatgacaccc
tccacagcttctcccccatcatatgacagtgtcacaaaacctgaaaaaaacaaatatgaa
aaagacaagagaaagaaggaggtgaaggagaaaaaaaagtacatggatgttgggaagatt
tag
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integrated database retrieval system
