Salmo trutta (river trout): 115164079
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Entry
115164079 CDS
T08542
Name
(RefSeq) nuclear receptor subfamily 6 group A member 1-A-like
KO
K08561
germ cell nuclear factor
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115164079
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
stru03310
]
115164079
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys4 germ cell nuclear factor
115164079
Nuclear receptors [BR:
stru03310
]
6. Germ cell nuclear factor
6A. Germ cell nuclear factor receptor
115164079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
115164079
NCBI-ProteinID:
XP_029572053
Ensembl:
ENSSTUG00000025026
LinkDB
All DBs
Position
27:25113910..25138427
Genome browser
AA seq
477 aa
AA seq
DB search
MNGVPANWEKHEMDTWEVILSLLSDDAADPRVCLICGDRATGLHYGIISCEGCKGFFKRS
ICNKRVYRCSRDKNCEMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQ
ITDEEIERIMSGQEFKEEASLPEHTWSNNGDSSDHSSPSNGASEGNQPSPASTLSSNRSL
EMGGGYTAAARDQYINTPMNTTYQLLPHLFSYATQSGLLAPQPRSLYPQSHPLVMQLVAA
EDLAPLATPMLIEDGYKVTQVELFALLCRLADELLFRQISWIKKLPFFCELSIEDYTCLL
SSTWQELILLSCLTIYSAQIFGDLADVTAKYTPSDEELQGFSEDSMELMERLIYLFRKFH
QLKVSNEEYACMKAINFLNQDIRGLTNVSQLEQLNKRYWYVCQDYTEYKYPQQPKRFPEI
MMCLPEIRFMAGKLVNVPLEQLPLLFKAVLHSCKSSFISNRTGSSPCLTTTGTSPGN
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcgtcccagcaaactgggagaagcatgaaatggatacatgggaagtcattctg
tctcttttgtcagatgatgcagctgacccacgtgtttgccttatctgtggagaccgcgcc
acaggcctgcactatggcatcatctcctgtgagggctgcaagggcttcttcaagcgcagc
atctgcaacaagcgtgtgtaccgatgcagccgagacaaaaactgcgaaatgtcgcgcaag
caacgcaaccgctgccaatactgccgtctgctcaagtgtctacagatgggaatgaaccgc
aaagcaatcagggaagatgggatgccaggagggagaaacaaaagtattgggcctgtccag
atcacagatgaagagattgagcggatcatgtcgggacaggagttcaaggaggaagccagt
ctgccggagcacacctggagcaacaacggtgacagtagtgaccacagttcccctagcaac
ggcgcctccgagggcaaccagccatcacctgcttccactctatcatccaatcgttcttta
gagatgggtggtggctacacggctgctgccagggaccagtacatcaacacccccatgaac
accacctaccagctgctacctcacctctttagctacgctacccagtcaggcctgctggcc
ccccagccccgcagcctctacccccagtcccaccccctggtgatgcagcttgtggctgca
gaagacctggctccactggccacccccatgctgatagaggacgggtacaaggtgactcag
gtggagttgtttgcgctgctgtgtcgtctggccgacgagctgctttttcgtcagatctcg
tggatcaagaagctgccgttcttctgtgagctgtctatcgaggactacacctgtttactc
agctctacctggcaggagctgatcctgctgtcctgcctcaccatctacagtgcacagatc
ttcggagacctggctgacgtcaccgccaagtacactccctctgatgaggagctgcagggg
ttcagtgaggatagcatggagttgatggagaggctgatctatctgttccgcaagttccac
cagttgaaggtcagcaacgaggagtacgcctgcatgaaagccatcaacttcttgaaccaa
gatatccgcggtctgactaacgtctcccagttggagcaactgaacaagcgctactggtac
gtgtgtcaggactacactgagtacaagtaccctcaacagcccaaacgcttccctgagatc
atgatgtgtctgccagagatccgtttcatggcagggaaactggtgaacgttcctctggaa
cagctccccctcttgtttaaagcagttttgcactcctgcaaatccagcttcatcagcaac
aggacaggaagttctccctgcctgactactactggtacctcccccgggaactga
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