Salmo trutta (river trout): 115164916
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Entry
115164916 CDS
T08542
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
stru
Salmo trutta (river trout)
Pathway
stru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115164916 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115164916 (ttc37)
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
115164916 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_14
TPR_8
TPR_17
TPR_16
TPR_11
TPR_19
TPR_9
TPR_12
TPR_CcmH_CycH
ANAPC8
PPTA
TPR_15
ANAPC3
HAT_PRP39_N
Motif
Other DBs
NCBI-GeneID:
115164916
NCBI-ProteinID:
XP_029573696
Ensembl:
ENSSTUG00000041193
LinkDB
All DBs
Position
27:33000094..33029146
Genome browser
AA seq
1568 aa
AA seq
DB search
MSNKEVKSALKNARDAIKNKEFKEVLKHCKAALKLEKNNYNAWVFIGVAASELEQPDQAQ
TAYRKALELEPEQLLAWQGLANLYEKSDQMDFKAELPKVYLKLIELYESSDKTKCYEVIR
KLADIFHMEKDYLQVARVWRRLIQLKEGEGADKAELLQLWQQMTCLLSDSMEEHDNETQQ
HLIAAFEKAMVLSDNVPGEDHRKLSADYLKCLSQLSHEECKMREACESILALYPSQTFPL
EILGAHHLKSGVCSEDAGRCFSRLLELDPDSGLGHLGLGIRALEEGKCDDSIKYLAQGLK
RMRSSLVGWFSLAQAQLKMHRYSDCATSCSQGLKLGGAGEEALRQKLLRLRLEALVRTGD
EHTADQALESLSQLLDANNDPVLVALKGRGYLQKGQVDQVLQVSTELLNSHPDLAEGLAL
RGLAHIAQGHHQLAEQSLLQAAAQNPACGEYYFLLGRLYWDMGEESRRDRSKAHTHLLKA
AKLDPYLGSVFCYLGHYYREVAKDQGRARGCYKRAFELDSNDAESGAASVDLSMKEGDMD
TALAVLQSVIQRATPGSAKWAWMRRGLYHLKVGQHPQACADLQAALRADPQDWVCWECLG
EAYLNRRSFTSALKAFAKAQLLNPSSIYSLYQTAAIKQTLGKFKEAAAEYLQIIAREDYV
PALKGLGECLLSLARGLMEDYRDGGAIDVIQQAIQYLFRAVELRPDLSCLWKLLGDACTS
VSTVAPNRARVVVPGPLAGLQPPDQGHLLNQGHTLRVGERCYGRALKLMPESSSLWYDLG
LNYYHQACLPRCLQEMEHNTLLLLLEKALQCVKKAIMLNSSNHSYWNALGVVAMSKGLEN
YALAQHSFIKSVQVEPNNVVAWTNLGALYLKKDSVELSHEAFKIAQSLEPLYVNCWIGQA
LIAEMVGSYDTMDLFRHTTELSTHTEGVKGYAYWVCATLLDKSNRDSELYRYNIVQMNAV
SAAQVALSKYTERIQTDPDAFVMLGFLNEHLQLKKQAVLAYQRAVELLQTMPSVELLAFS
LGSYGRALCNTGQWEEAVRVYSSTSLEVLHDLAGLALAYCRAGLIPESISAYEKALMVAT
TEKEKAYILTSLALLQHRLGNMDSAKTLLFKCSMLKEPVPESLLCLCALGLVHGDSTLAS
AALTELLKQGRAAGAAVEQRCLLTCTLLALQGNYSAVQREASRAVHSNPGNPSLWALLSR
LVPQYYPRKAKGGAVAGHVACLSSMTQGKRALLYSGVNQLACGRHSGEDRSRNALKTMQR
AVLLCPDDPAMWAGLMAACHTENTACSLSGSTPGRRGLEQVLMAVVSEKVQNVEEVEQPL
AQALEGWVLQQAVTGLTSGGQLEQAEALCSQVLSVSPEHPAVVLLLRQVQCEHLLLSSAG
TALPASVLEQLSSAVLANHTSVAAWHWLAEVYRTQGLLVQAVMAYRQSLQLASQLDLHSG
KMACLLRLALLALSPCMAKVPGDEWKELVLEATTEALKLGPSPVALLVQALLHFATKMAA
RETRRLLERLVYFPSQGYPETVACVARWYLLRHLHAKDDLELMDTLVDDAKASGDGRLLE
FHTRLTSC
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacaaagaagttaaatcagctctaaaaaatgccagagatgccataaagaacaag
gaatttaaagaggtgctaaaacactgcaaggctgccctgaagctagagaagaacaattac
aatgcctgggtgttcattggtgtggccgcgagcgagctggagcaaccagaccaggcccag
acagcctacaggaaggctctggagctggagccagagcagctgctggcctggcagggatta
gcaaacctgtatgagaaaagtgaccagatggatttcaaagcagaactacccaaagtctac
ctgaaactcattgagctttatgaaagttcagacaaaacaaaatgttatgaggtgatcaga
aaactggcagacatcttccacatggagaaggactatttacaggtggccagggtgtggcga
aggctgattcagctgaaggaaggagaaggtgctgacaaggcagagctgctgcagctatgg
caacagatgacctgccttctctcagacagcatggaggaacacgacaatgagactcagcag
cacttaattgcagcctttgagaaggccatggttctctccgacaatgtgcctggcgaggac
catcggaagctctcagctgactacctcaaatgcctttcacaactttcgcatgaagagtgt
aaaatgagagaggcctgtgagtccatattggccctctatccctcacaaacattccctttg
gagatcctcggtgcacatcatctcaagtcaggggtctgcagtgaggacgcgggccgttgt
ttctcccgtctcttggagttggacccagacagtggcttaggccatctgggtttgggcatc
agagctctagaggagggaaaatgtgacgactccattaagtacctggcccaaggactgaag
cgaatgcgctccagcttggtaggctggttcagccttgctcaggcccagctgaaaatgcac
cgatattccgactgcgcaacatcctgctcccaaggtctgaagctgggtggggctggagaa
gaagcactgcgacaaaagctcctgaggctgagactagaggcccttgtgaggactggggat
gagcacactgcagaccaagccctggagagcctctcacagcttttagatgctaacaatgac
cctgtcctggtagccttaaaaggaagagggtatttgcaaaaaggccaagttgaccaagtg
ctccaggtgtccacggagctgctgaactctcaccctgacctggctgagggactggcgctg
aggggactggcacacattgcacagggccatcaccaactagcagaacaaagcctcctgcag
gctgcagcccaaaacccagcctgtggagagtactacttcctgttggggcggctgtactgg
gacatgggggaggagagtcgcagggacaggagcaaggcccacacccatctactgaaggct
gccaaactggatccatacctgggctctgtgttctgctacctgggccattactaccgggag
gtggccaaggaccagggtcgagccaggggctgctacaagagagcctttgagctggacagc
aacgacgcagagtccggggctgcctctgtggatctgagcatgaaggagggggacatggac
actgccctggctgtgctccagtcagtgatccagagagccacccctggttcagcaaagtgg
gcctggatgagacgaggcctctaccacctgaaggtgggccagcacccccaggcctgtgca
gatctgcaggctgctctgagggctgacccccaggactgggtgtgctgggaatgtctgggc
gaggcctacctgaaccgccggagcttcacgtcggccctgaaggcctttgccaaggcccag
ctgctcaacccctcctccatatacagcctctaccagactgctgccatcaaacagaccctg
ggcaagttcaaagaggctgctgcagagtacctgcagatcatagcccgggaagactatgtg
cctgcactcaaaggccttggggagtgtctgctgtctttggccagaggcctgatggaggac
tatagagatggaggagccatagacgtcatccagcaggccatccagtacctcttcagggct
gtagagctgcgtccagacctgtcctgtctgtggaagttactgggagatgcctgcacctca
gtcagcactgtggcccccaacagggcccgcgttgtggtgccaggacccctggccgggtta
caacccccagaccagggccaccttctcaaccagggacacaccctccgagtgggggagaga
tgctatgggcgtgctctgaagctgatgcctgagagctccagcctgtggtatgacctgggt
ctcaactactaccaccaggcctgtctgccccgctgccttcaggagatggagcacaacacc
ctgctactgctgctggagaaggccctgcagtgtgtgaagaaggccatcatgttgaacagt
agtaaccatagctactggaacgccctgggagtggtcgccatgagcaaaggacttgagaac
tatgcccttgcccaacacagcttcattaagtcagtgcaagtggaacccaataatgttgtt
gcttggacaaacctgggtgctttgtatctgaagaaagacagtgttgagctctcccatgaa
gcctttaagatcgcccagtctttggaaccactgtatgtcaactgctggattggacaggcc
cttattgcagagatggtgggcagttatgataccatggacctgttcagacacaccacagag
ctcagtacacacacggagggggtaaagggctatgcttactgggtttgtgccactctgctg
gataagagtaacagggactctgagctctatcgctataacatcgtccagatgaacgcggtg
tctgctgctcaggtggctttgagcaagtacacagagcgtatccagacagaccctgatgcc
ttcgtcatgctgggtttcctcaacgagcacctgcagctaaagaagcaggcagtgctagct
taccagagagctgtggagttgctgcagacgatgccttctgtggagttactggccttctcc
ctgggaagctatggccgggccctctgcaacacaggccaatgggaggaggcggtgcgcgtt
tactcttccacatctctagaggtgctccatgacttggcaggcctggcgctggcctactgc
agagcaggactcatcccagagagcatcagtgcctatgagaaggctctgatggtggccacc
actgagaaagagaaggcctacattctgacttctctggctctgctgcagcacagactgggg
aacatggactccgctaaaacactgcttttcaaatgctccatgctgaaggaacctgtgcca
gagtctctgctgtgcctgtgtgctctggggctggtccatggggacagcacactggccagc
gcggccctcactgagctgctgaagcagggcagggccgctggggctgctgtggagcaacgc
tgcctgctcacctgcaccctgctggccctgcagggcaactacagcgctgtgcagcgagag
gcctccagggccgtccacagtaaccctggcaacccttccctctgggccctgctttccaga
ctggtgccacagtattaccccaggaaggccaagggaggtgcagtggcaggccacgtggcg
tgtctctccagcatgacccaaggaaagagggcactgctgtacagtggagtgaaccagctg
gcttgtggcaggcactctggagaagaccgcagcaggaacgccctgaagaccatgcagagg
gctgtgctgctctgccccgatgacccggcgatgtgggcggggctaatggctgcttgtcac
acagagaacacagcttgctccctctctggctccacgcctggcagacgaggcttggagcag
gtgctcatggccgtggtgtcagagaaagtgcagaatgtggaggaggtggaacagcctctg
gcccaggctctggagggttgggtgctgcagcaggctgtgacaggactgacaagtggaggc
cagctagagcaggctgaggccctctgctctcaggtcctgagtgtgtctcctgagcacccc
gctgtagtcctgctgttgaggcaggtgcagtgtgaacacctcctcctgtccagtgccggt
actgccctgccagcttccgtcctggagcagctcagcagtgccgtcctagccaatcacacc
tcagtggccgcctggcactggctggcggaggtgtatcgtacccagggtctgctggtacag
gcagtaatggcctacagacaaagcctgcagctggcctcccagcttgacctccacagtggg
aaaatggcatgtcttctgcgcctagccctgctggccctcagcccctgcatggcgaaagtc
cctggtgatgaatggaaggagctggttctggaggcgaccactgaggctctgaagctgggc
ccctcccctgtagccctccttgtccaggccctgctacactttgccaccaagatggccgcc
agggagacgaggcgtctgttggagaggctggtgtacttcccctcccagggttacccagag
acggtggcgtgtgtggctcgctggtacctcctacgccacctgcatgccaaagacgacctg
gagctgatggacaccctggtggatgacgccaaagccagtggagatggcagactgctggag
ttccacacacggctcacctcttgctga
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integrated database retrieval system
