Salmo trutta (river trout): 115164986
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Entry
115164986 CDS
T08542
Symbol
aptx
Name
(RefSeq) aprataxin
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
115164986 (aptx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stru03400
]
115164986 (aptx)
Enzymes [BR:
stru01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
115164986 (aptx)
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
115164986 (aptx)
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
115164986 (aptx)
DNA repair and recombination proteins [BR:
stru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
115164986 (aptx)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
115164986 (aptx)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
FHA_2
zf-C2HE
HIT
FHA
zf-C2H2_4
zf-C2H2
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
115164986
NCBI-ProteinID:
XP_029573830
Ensembl:
ENSSTUG00000033812
UniProt:
A0A674BZJ7
LinkDB
All DBs
Position
27:complement(37244515..37246039)
Genome browser
AA seq
348 aa
AA seq
DB search
MSICLLISKNGKHKPIHLPHLQTVILGRGPETTIKDKKCSREQVELKADCNKGYISVKQL
GVNPTSVDSEVVGKGNQVGMRSGQQLHMVNELYPYTVCFKEDPSNSQSSVGTKRPCGPAS
EERELHREPHGHKVPRKTEDSTQCKHGGSTSTNTRSEPQTTEKTETLGYWSQGLKASMED
PKMQVYKDDRVVVIMDKYPKAHYHWLVLPWESIPSLKTLRREHCDLLRHMNQVADRIVQQ
QCPDAGLLHFRQGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFTTDYFIESQEVIQM
LEKDGKVTVKEGTNELLKLPLCCHVCGMALSTIPQLKEHLKSHPYGRL
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgtctatctgtttgctgatcagcaaaaatggaaagcataaaccgattcatctacctcac
ctacagacagttatcttgggtcgaggtccagaaacaacgataaaagacaaaaaatgttcc
agagagcaggttgagctcaaggcagactgcaacaaagggtatatcagtgtaaaacaactg
ggtgtcaaccccactagtgtggactctgaggtggtgggtaaaggcaaccaagtggggatg
agatctggccagcagctgcacatggtaaatgagctgtacccgtatactgtgtgcttcaaa
gaggatccatccaactctcagtccagtgtgggcaccaagaggccctgtgggcctgcctca
gaggagcgggagcttcacagagagccccatgggcataaagtaccaaggaaaacagaggac
tccactcagtgcaagcatggagggtccacctccactaacacacggtctgaacctcaaaca
acagagaaaacagaaactttaggatattggagccaaggattgaaagcctcaatggaagac
cccaaaatgcaggtctacaaggatgacagagtagttgttatcatggacaagtaccccaag
gctcactaccactggcttgtcctgccctgggagtccatccccagtctgaagacactgcgc
agggagcactgtgatttgttgaggcacatgaaccaggtagcagacaggattgtacaacag
cagtgccccgatgccggcctgctacacttccgccagggctaccacgccatccccagtatg
agccatgtccatctacacgtgatcagccaggactttgactccccttgtttaaagaacaag
aaacactggaattcattcacaaccgactatttcatagaatctcaagaagtcattcagatg
ctggaaaaggatgggaaggtcacggtaaaagaagggacaaatgagttgttgaaactacct
ctctgctgtcacgtgtgtggcatggcgctgtccaccataccacaacttaaggagcacctg
aaatctcacccctatggtagattgtga
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integrated database retrieval system