KEGG   Salmo trutta (river trout): 115167029
Entry
115167029         CDS       T08542                                 
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 2-like isoform X1
  KO
K10165  nucleotide-binding oligomerization domain-containing protein 2
Organism
stru  Salmo trutta (river trout)
Pathway
stru04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:stru00001]
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    115167029
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:stru04054]
    115167029
Pattern recognition receptors [BR:stru04054]
 Cytoplasmic pattern recognition receptors
  NOD-like receptors
   115167029
SSDB
Motif
Pfam: NACHT CARD NLRC4_HD2 LRR_6 NOD2_WH AAA_16 AAA_29 AAA_22 AAA_30 Viral_helicase1 T2SSE Sigma54_activat nSTAND3 ABC_tran
Other DBs
NCBI-GeneID: 115167029
NCBI-ProteinID: XP_029576917
Ensembl: ENSSTUG00000011203
LinkDB
Position
29:complement(18078962..18086356)
AA seq 1002 aa
MSARQLVLRQRAELLRALCCGGSSEGLESVLDLLLSWGMLFWEDYQNVRVPGRTPCANTR
VLLDLVYTKGDETCRLLLAAFKQVLPEAQRAGLSFGNCQTADIENTRDDTKELHGTAIQT
LQTDRPGLVRRLRDRIEGALEVLLHTGSFTPSDCDEVHLPLYTPSQQARRLLDQVRSKGE
PAAKVLLQYFQQTEDHPSPSIQEAPPKECLSYQKKLRSTVSAQSHFLSTYGGTSSLSLED
IYTEVQLELAQGGSEAQPQTGALGLEDVVGLVGTLNQEADTVLVSGEAGSGKSTLLQRLH
LLWARGAALHDFFLLFPFSCRRLSSEQRELSLRELLFLHCCWPDGDQDRIFQFILDHPHL
ILFTFDGLDELMQSFSDSEQRHCCPTQCAPVPTLLFNLLQGSLMKGVRKVVTSRPEAVGP
TLKRYLRKELLLKGFSPGGIDCFVRKHHRDPTVATRVLESLRSNTALLGLCHIPVFCWIV
SKCYKELLGCGEGEASPQTITDVYLMILQHFFQRRASQRNTMGIGWVQEHQDTALHLGQL
AMEGLGASCYVFTGTELQKCAVTEEDICMGFLIRSKDLSSSTNCKHYEFLHITMQCFFAA
LYIVLNNNLDRSTIPKLFQLQDRQPQPGFHRMCLGHCLIQQEGALKEANTAAETPNLQIT
ATFVSGLLSQRHRSLLLLSCPGPTLDRKSKQVVTCLSKGMQKHFKSIPRPVEGEKKSMHA
MPGFVWLIKCIHEMQDSRIARDTMAKLEVEHLKLTYCNIGPVECTALAYVLQHLRNPVGL
QLDYNYVGDVGVEQLLPCLHVCHSVYLRHNNISDEGIRKLIEKGIQCERFQKIALFNNKL
TDACTECFAHLLKMKQNFLSLRLGNNNITAAGAGQLAEGLRFNRSLQFLGLWGNKIGDKG
AEAIANALKDSQTLVWLRCMFHGSLVDNGVGSAGACALAPLIRNSTLEELWLTKNCITRT
GVECLILALESNTSVKAVWLRGNELSPEEVEEMTQREPRLTF
NT seq 3009 nt   +upstreamnt  +downstreamnt
atgagtgcccggcagctggtcctgaggcagagagcagagcttctgcgtgccctgtgctgt
ggtggctcttctgagggtctggagagtgtattggacctactcctgtcctggggcatgctg
ttctgggaggactaccagaatgtacgggtaccaggccgtactccgtgtgccaacacaagg
gtgctactagatctggtgtacaccaagggagatgagacctgtcgactgctcctggctgct
ttcaaacaggtcctccctgaagcccaaagagctggcctctcttttggaaactgtcaaact
gccgatatagaaaatacaagagatgatacaaaagaactacatggtacagctatccagacc
ctacagacagacaggcctggtctggtgaggaggctaagggaccgtattgaaggagctctg
gaggtcctgctgcatacgggcagctttacaccatctgattgcgatgaagtgcatctacct
ctctacaccccctcacaacaggcaaggcgtctactggaccaggtcagatcaaagggggag
cctgcagcaaaggtcctactgcaatactttcagcaaacagaggaccatccctcaccatct
atccaagaggctcctcccaaagagtgcttgtcctatcagaagaagctgcgcagcactgtg
tcggcccagtcacatttcctcagcacgtatggaggaaccagcagtctgtctctagaagac
atctacacagaggttcagctggagcttgcccagggtggcagtgaggcccagccccagact
ggtgctctggggctggaggacgtggtgggcctggtgggcaccctgaaccaggaggctgac
actgtgctagtctctggggaggcaggcagtgggaagagcacccttctccagaggctgcac
ctcctctgggccaggggggcggctctacatgatttcttcctcctctttcccttcagctgt
cgcaggctgagctcggagcagagggagctgtctctcagagagctgctgttcctgcactgc
tgctggccggacggggaccaggacagaatcttccagttcatcctggaccatccgcacctc
atcctcttcaccttcgacggcctggacgagctcatgcagagcttctcagactcagagcag
aggcactgctgccccacccagtgtgcccccgtccccaccctgctcttcaacttgctgcag
ggatccctcatgaagggggtgaggaaggtggtgaccagccggccagaggcagtgggaccc
accctgaagcggtaccttcgcaaggaactcctcttgaaaggcttctcgcccggcgggatc
gactgcttcgtgaggaagcatcatcgcgacccgacggtggccaccagggtcctggagtct
ctacgaagcaacacagctctactgggcctgtgtcacatcccggttttctgctggattgtg
tccaagtgttataaggagctgctgggctgtggagagggagaggccagtccccagaccatc
acagatgtttacctcatgatcctgcagcacttcttccagcgccgggcctctcagaggaac
accatggggataggatgggtgcaggagcaccaggatactgccctgcatctggggcagcta
gccatggagggcctgggggcctcttgttacgtcttcacaggcacagagctacagaagtgt
gcggtgaccgaggaagatatctgcatggggttcctcattcgtagtaaagacctctcctcc
tctacgaactgcaaacactacgagttcctgcacattaccatgcagtgcttctttgctgct
ctctacattgtcctgaacaataacttggaccgctccaccatccctaagctctttcagctg
caggacaggcagccacagcctggctttcacaggatgtgtctggggcactgcttgatccaa
caagaaggggccttgaaggaggccaatacggcagcagagacccccaacctccagataaca
gccacttttgtgtctgggctcttgtctcagcgccaccgcagcctgctgctcctctcctgc
cctgggcccactctggacaggaagtccaagcaggtggtgacgtgcctgtccaaaggcatg
cagaagcactttaaatccatccctcggcccgtggagggggagaagaagagcatgcacgcc
atgccgggcttcgtgtggctcatcaagtgcatccatgagatgcaggacagcaggattgcc
agagacactatggctaagctagaggtggaacacctgaagctgacctattgtaacataggc
cctgtggagtgtactgcgctggcctacgtgctccagcaccttaggaaccctgtggggctt
cagctagactacaactatgtaggagacgttggggtggagcagctgctgccttgcctgcat
gtctgtcactctgtatacctgagacacaataacatatcagatgagggaatccgtaaattg
attgaaaaaggcatccagtgtgagcgctttcagaagattgcgctcttcaacaacaagcta
actgatgcctgcacagagtgcttcgctcacctcctgaagatgaaacagaattttctctct
ctaaggctgggaaacaataacatcacagcagcaggggcagggcaactggcggagggactg
aggttcaatcggtcactacagttcttggggctttggggaaataaaataggtgataaaggt
gcagaggccattgccaatgctctaaaggacagccaaaccttggtgtggctcagatgtatg
tttcatggcagcctggtagacaatggtgttggcagtgcaggagcatgtgctcttgctcca
ctcatcaggaacagtacgctagaggagctgtggttaaccaaaaactgcatcacaagaaca
ggtgtggagtgtctaatactggctcttgaaagcaacactagtgtgaaggcagtgtggttg
agaggtaatgagctcagcccagaagaggtggaggagatgacacagcgggaacctaggctt
acattctga

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