Salmo trutta (river trout): 115167029
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Entry
115167029 CDS
T08542
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 2-like isoform X1
KO
K10165
nucleotide-binding oligomerization domain-containing protein 2
Organism
stru
Salmo trutta (river trout)
Pathway
stru04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
115167029
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
stru04054
]
115167029
Pattern recognition receptors [BR:
stru04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
115167029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
CARD
NLRC4_HD2
LRR_6
NOD2_WH
AAA_16
AAA_29
AAA_22
AAA_30
Viral_helicase1
T2SSE
Sigma54_activat
nSTAND3
ABC_tran
Motif
Other DBs
NCBI-GeneID:
115167029
NCBI-ProteinID:
XP_029576917
Ensembl:
ENSSTUG00000011203
LinkDB
All DBs
Position
29:complement(18078962..18086356)
Genome browser
AA seq
1002 aa
AA seq
DB search
MSARQLVLRQRAELLRALCCGGSSEGLESVLDLLLSWGMLFWEDYQNVRVPGRTPCANTR
VLLDLVYTKGDETCRLLLAAFKQVLPEAQRAGLSFGNCQTADIENTRDDTKELHGTAIQT
LQTDRPGLVRRLRDRIEGALEVLLHTGSFTPSDCDEVHLPLYTPSQQARRLLDQVRSKGE
PAAKVLLQYFQQTEDHPSPSIQEAPPKECLSYQKKLRSTVSAQSHFLSTYGGTSSLSLED
IYTEVQLELAQGGSEAQPQTGALGLEDVVGLVGTLNQEADTVLVSGEAGSGKSTLLQRLH
LLWARGAALHDFFLLFPFSCRRLSSEQRELSLRELLFLHCCWPDGDQDRIFQFILDHPHL
ILFTFDGLDELMQSFSDSEQRHCCPTQCAPVPTLLFNLLQGSLMKGVRKVVTSRPEAVGP
TLKRYLRKELLLKGFSPGGIDCFVRKHHRDPTVATRVLESLRSNTALLGLCHIPVFCWIV
SKCYKELLGCGEGEASPQTITDVYLMILQHFFQRRASQRNTMGIGWVQEHQDTALHLGQL
AMEGLGASCYVFTGTELQKCAVTEEDICMGFLIRSKDLSSSTNCKHYEFLHITMQCFFAA
LYIVLNNNLDRSTIPKLFQLQDRQPQPGFHRMCLGHCLIQQEGALKEANTAAETPNLQIT
ATFVSGLLSQRHRSLLLLSCPGPTLDRKSKQVVTCLSKGMQKHFKSIPRPVEGEKKSMHA
MPGFVWLIKCIHEMQDSRIARDTMAKLEVEHLKLTYCNIGPVECTALAYVLQHLRNPVGL
QLDYNYVGDVGVEQLLPCLHVCHSVYLRHNNISDEGIRKLIEKGIQCERFQKIALFNNKL
TDACTECFAHLLKMKQNFLSLRLGNNNITAAGAGQLAEGLRFNRSLQFLGLWGNKIGDKG
AEAIANALKDSQTLVWLRCMFHGSLVDNGVGSAGACALAPLIRNSTLEELWLTKNCITRT
GVECLILALESNTSVKAVWLRGNELSPEEVEEMTQREPRLTF
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcccggcagctggtcctgaggcagagagcagagcttctgcgtgccctgtgctgt
ggtggctcttctgagggtctggagagtgtattggacctactcctgtcctggggcatgctg
ttctgggaggactaccagaatgtacgggtaccaggccgtactccgtgtgccaacacaagg
gtgctactagatctggtgtacaccaagggagatgagacctgtcgactgctcctggctgct
ttcaaacaggtcctccctgaagcccaaagagctggcctctcttttggaaactgtcaaact
gccgatatagaaaatacaagagatgatacaaaagaactacatggtacagctatccagacc
ctacagacagacaggcctggtctggtgaggaggctaagggaccgtattgaaggagctctg
gaggtcctgctgcatacgggcagctttacaccatctgattgcgatgaagtgcatctacct
ctctacaccccctcacaacaggcaaggcgtctactggaccaggtcagatcaaagggggag
cctgcagcaaaggtcctactgcaatactttcagcaaacagaggaccatccctcaccatct
atccaagaggctcctcccaaagagtgcttgtcctatcagaagaagctgcgcagcactgtg
tcggcccagtcacatttcctcagcacgtatggaggaaccagcagtctgtctctagaagac
atctacacagaggttcagctggagcttgcccagggtggcagtgaggcccagccccagact
ggtgctctggggctggaggacgtggtgggcctggtgggcaccctgaaccaggaggctgac
actgtgctagtctctggggaggcaggcagtgggaagagcacccttctccagaggctgcac
ctcctctgggccaggggggcggctctacatgatttcttcctcctctttcccttcagctgt
cgcaggctgagctcggagcagagggagctgtctctcagagagctgctgttcctgcactgc
tgctggccggacggggaccaggacagaatcttccagttcatcctggaccatccgcacctc
atcctcttcaccttcgacggcctggacgagctcatgcagagcttctcagactcagagcag
aggcactgctgccccacccagtgtgcccccgtccccaccctgctcttcaacttgctgcag
ggatccctcatgaagggggtgaggaaggtggtgaccagccggccagaggcagtgggaccc
accctgaagcggtaccttcgcaaggaactcctcttgaaaggcttctcgcccggcgggatc
gactgcttcgtgaggaagcatcatcgcgacccgacggtggccaccagggtcctggagtct
ctacgaagcaacacagctctactgggcctgtgtcacatcccggttttctgctggattgtg
tccaagtgttataaggagctgctgggctgtggagagggagaggccagtccccagaccatc
acagatgtttacctcatgatcctgcagcacttcttccagcgccgggcctctcagaggaac
accatggggataggatgggtgcaggagcaccaggatactgccctgcatctggggcagcta
gccatggagggcctgggggcctcttgttacgtcttcacaggcacagagctacagaagtgt
gcggtgaccgaggaagatatctgcatggggttcctcattcgtagtaaagacctctcctcc
tctacgaactgcaaacactacgagttcctgcacattaccatgcagtgcttctttgctgct
ctctacattgtcctgaacaataacttggaccgctccaccatccctaagctctttcagctg
caggacaggcagccacagcctggctttcacaggatgtgtctggggcactgcttgatccaa
caagaaggggccttgaaggaggccaatacggcagcagagacccccaacctccagataaca
gccacttttgtgtctgggctcttgtctcagcgccaccgcagcctgctgctcctctcctgc
cctgggcccactctggacaggaagtccaagcaggtggtgacgtgcctgtccaaaggcatg
cagaagcactttaaatccatccctcggcccgtggagggggagaagaagagcatgcacgcc
atgccgggcttcgtgtggctcatcaagtgcatccatgagatgcaggacagcaggattgcc
agagacactatggctaagctagaggtggaacacctgaagctgacctattgtaacataggc
cctgtggagtgtactgcgctggcctacgtgctccagcaccttaggaaccctgtggggctt
cagctagactacaactatgtaggagacgttggggtggagcagctgctgccttgcctgcat
gtctgtcactctgtatacctgagacacaataacatatcagatgagggaatccgtaaattg
attgaaaaaggcatccagtgtgagcgctttcagaagattgcgctcttcaacaacaagcta
actgatgcctgcacagagtgcttcgctcacctcctgaagatgaaacagaattttctctct
ctaaggctgggaaacaataacatcacagcagcaggggcagggcaactggcggagggactg
aggttcaatcggtcactacagttcttggggctttggggaaataaaataggtgataaaggt
gcagaggccattgccaatgctctaaaggacagccaaaccttggtgtggctcagatgtatg
tttcatggcagcctggtagacaatggtgttggcagtgcaggagcatgtgctcttgctcca
ctcatcaggaacagtacgctagaggagctgtggttaaccaaaaactgcatcacaagaaca
ggtgtggagtgtctaatactggctcttgaaagcaacactagtgtgaaggcagtgtggttg
agaggtaatgagctcagcccagaagaggtggaggagatgacacagcgggaacctaggctt
acattctga
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