Salmo trutta (river trout): 115167035
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Entry
115167035 CDS
T08542
Name
(RefSeq) terminal nucleotidyltransferase 4A-like
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115167035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115167035
03016 Transfer RNA biogenesis [BR:
stru03016
]
115167035
Enzymes [BR:
stru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
115167035
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
115167035
Transfer RNA biogenesis [BR:
stru03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
115167035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
TUTase
PAP_NTPase
Motif
Other DBs
NCBI-GeneID:
115167035
NCBI-ProteinID:
XP_029576929
Ensembl:
ENSSTUG00000011736
LinkDB
All DBs
Position
29:complement(18357670..18382478)
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AA seq
648 aa
AA seq
DB search
MDPRIAWFQPEQRGPANSLWMQIWETTQGLGNLYFNNNCNTGSLSSTSSLSPKSNINGTL
GNEISSKNGAVTNSEPRNKGMSNSTKDIDVVEQRDFIPLEANNNHNNRSSLGRGSGGWQV
GTRVSGVSGHPNKRKRDNKASTYGFNSSLETGGCGYTGTPWKVKNYSEGILGLHEEINDF
YKHMSPRAEEERMRMEVVDRIERVIKDLWPTADVQVFGSFSTGLYLPTSDIDLVVFGNWE
NLPLWTLEEALRKKNVTDENSIKVLDKATVPIIKLTDFRTEVKVDISFNVKNGVKAALLI
KDYKKKYPVLPKLVLVLKQFLLQRDLNEVFTGGIGSYSLFLMAVSFLQLHYREDACSPNA
NVGVLLIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVQKSTDLYRPSMLFIEDPLAPDN
DVGRSSYGVLQVKQAFDYAYVVLNHAVSPIAKYYPNNESESILGRIIRVTQEVAEYRDWI
TKLWGPQSQNEPALNGNDVTLLVKPQQLDECNNNLTEEVTASRSKTSSNSSSLSSSSSST
VSSSSDVDSDGTPCKSVKQLPGRGSSAHRESSGGVTNHRTQRHTTSTPTDNKGGKARLFR
SSSKNTHHVQQNSSSSNIKSHPSSKPHYQGNSKKRKPQQHSEAQDLCR
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggatccaagaatcgcttggtttcagccagaacaacgtgggccagccaacagcctgtgg
atgcagatttgggaaacaacacaaggactggggaatctgtacttcaataacaactgtaac
acgggtagtttgtctagcacgtcaagcctcagtccgaaatcgaacatcaacgggacattg
ggtaacgagatctcgagcaagaacggagctgtcactaacagcgaacccaggaacaaggga
atgtccaactcaacgaaagacatagatgtggtcgaacaacgagactttattccgttggaa
gctaataacaaccacaacaaccgttcatcgttggggaggggcagtggagggtggcaagtg
ggcactcgggtctctggggtctcaggacaccccaacaaaaggaaaagagacaacaaggct
agcacttatggattcaacagtagcctcgagaccggaggctgtggttacacgggaacacca
tggaaagtcaagaactactctgaaggaatcttggggctccatgaggagatcaatgacttc
tacaaacacatgtctcctcgggcggaggaggagaggatgaggatggaggtggtggacagg
atcgagagggtcatcaaagacctgtggcccactgctgacgttcaagtgtttgggagtttc
agcacgggcctctatctgccaaccagtgacatcgatctggtggtgtttgggaactgggaa
aacctgcccctttggaccctggaagaggccctgcggaagaaaaacgtgactgacgagaac
tccatcaaagtgctggacaaggccacggtacccatcatcaagctgacagacttccgcaca
gaggtgaaggtggacatcagcttcaatgtgaagaatggagtcaaagctgcccttctcatc
aaagactacaaaaagaaatacccagttcttccgaagctggttctggtgctgaagcagttc
ctgctccagagggatctgaacgaggttttcactggagggatcggctcctacagcctcttc
cttatggctgtcagcttcctgcagcttcactacagagaagatgcgtgcagccccaatgcc
aacgtgggcgttctccttatagagttctttgagctctatgggcgccacttcaactacctg
aagacgggcatccggatcaaagatggcggcagctatgtggccaaagacgaggttcagaag
agcactgacctctacaggccctccatgctcttcattgaggaccccctagcaccagataat
gacgttggccgcagctcatacggtgtgttgcaggtgaagcaggcctttgactatgcctac
gtagtgctcaaccacgccgtatcgcccatcgccaagtactaccccaacaacgagtctgag
agtatactcggcagaataattcgggtgacccaggaagtggctgagtacagggactggatc
accaagctctggggaccacagtctcagaatgaacctgccctgaatggaaatgatgtcaca
ctgttggtgaagcctcagcagctggacgagtgcaacaacaacctgacggaggaggtgact
gcatctcgcagcaagacctcctccaactcctcctcattatcgtcatcctcatcctccacg
gtatctagttccagcgacgttgattctgacgggacgccctgtaagtcagtgaagcaactg
cctgggcggggctccagcgcccacagagaatcctcaggtggcgtgaccaatcacagaaca
cagaggcacaccaccagcactcctactgacaacaaggggggcaaggccaggttgttccgc
tcgtccagtaaaaacacccaccatgtccagcagaactcgtcctcatccaacatcaagagc
cacccaagcagcaagccacactaccagggcaacagcaagaagaggaaacctcagcagcac
tcagaggcccaggacctctgcagatag
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