KEGG   Salmo trutta (river trout): 115168037
Entry
115168037         CDS       T08542                                 
Name
(RefSeq) lysine-specific demethylase 5B-B-like isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
stru  Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:stru00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:stru01009]
    115168037
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:stru03036]
    115168037
Enzymes [BR:stru01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     115168037
Protein phosphatases and associated proteins [BR:stru01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     115168037
Chromosome and associated proteins [BR:stru03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    115168037
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_2 PHDvar_NSD PHD-1st_NSD
Other DBs
NCBI-GeneID: 115168037
NCBI-ProteinID: XP_029578747
Ensembl: ENSSTUG00000010021
LinkDB
Position
30:14266215..14301926
AA seq 1543 aa
MTQPRPDEFKPPQECPVFEPSWEEFADPFAYINKIRPIAEKTGICKVRPPPDWQPPFACD
VDRLHFTPRIQRLNELEAQTRVKLNFLDQIAKFWELQGCSLKIPHVERKILDLYQLNKNV
ADEGGFDIVCRDRRWTAIALKMGFAPGKAVGSHLRSHYERLLYPYNLFQSGANLLAPELA
SKLMRLVSAPELDTFVQEPTLPVDTSDKECKPPDLTERQHFVEPTESCCNSAHRAKWMRA
EVDDLVVQSHTHLSEELLLKPSGCVKTEPGTEPCENNRPNLRRRMGSFVAKPEPDIPILV
KQEPIEPVSEADKNKSRYKKKTSIDAPPPAVSVVDLYMCLVCGSGSDEDRLLLCDGCDAS
YHTFCLIPPLHDIPKGDWRCPKCLAQECSKPQEAFGFEQAYRDYSLRAFGEMADSFKSDY
FNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPIKNGRFKVSEKDEK
YLNCGWNLNNMAMMDPSVLTHVTADICGMTLPWLYVGMCFSSFCWHIEDHWSYSINYLHW
GEPKTWYGAPGFAAEQLEAVMKKLAPELFQIQPDLLHQLVTIMNPNTLMSYGVPIYRTNQ
CAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWMALGRQCVDHYRLLHRYCVFSHDEMI
CKMASKANSLDVVLASAVQKDMKDMIREEQDLRDKVRKMGVLHCEQAEYDLLQDDERQCA
KCRTTCFLSAITCPCSPGQLVCLHHIQDLCSCPLTNYTLNYRFTLDDLYPMMNVVKQRAE
SYDEWASRVTETLEAKLDKKKSLSVFRSLINESESKMFPDNDLLRQLRLVTQDAEKCFSV
AQQLLNGKRQTRYRCGGGKTQSQLTVQELRSFVRQLYNIPCSLPQAPKLKDLLNCIEDFQ
QHSEKVLMDEATGTAVIQSLLDVSFDFDVELPELPILRERLEQARWLEGVQQTSAQPSTL
TLETMRRLIDQGVGLTPHPSVEKAMAHLQELLTVSEHWEEKTSILLKARPPPSIEVLSEA
AEKVVGIPAYLPNCMMLKDSISRAREWLQEAEAFQDGDSIPLFDELSDMVIRGQAIPVQL
DPLKHLEFLVAELQAWKESAAKIFLIKNSHFTLLEVLCPRFEVGAGSPKRKSKKAKDCSK
KKMVKLDCLSDVEKALLETKDTTSALATLGEVRLREMWALSSLRAANESKLLPTADCMDL
KVCVCQNPPMGAMLQCELCRDAFHSVCVRAPSDSRSAQAWLCPDCRRSEKPPLDKVMPLL
ASLQRIQVRLPEGDALHYLVERTVSWQHRARQVSASCGLPDLEENFTTSPSPVGKPPCLT
PEWNRTSHDQMVFYTEQRCIPLQGLSVELEELMVEGLLLQVSLPEITQLYHVLLNGLGTH
HTHGRTSQQEDDPSGCDKRKQCNSQGRSSPQKEDGLKKEVVNGVEKKAKRRLEREALETE
RRDKAKKLQNKRQKMNKEKNLERRAASTSSSPRSDFSQSDDSEEEMAMCPAEGCQQPEGD
EVDWVQCDGSCNQWFHQVCVGVTAELAEKEDYVCVSCTISDGR
NT seq 4632 nt   +upstreamnt  +downstreamnt
atgacccagcctcggccggacgagttcaagccgcctcaggagtgcccagtcttcgaacca
agctgggaggaatttgccgatccttttgcttatataaataagatccgtccaattgcggaa
aaaacgggtatttgtaaggtccgcccgcctccggactggcagcctccatttgcatgtgat
gttgacagactgcacttcactcctcggatacagaggctaaatgaactggaggcacagacc
agagttaagcttaacttcttggaccagattgcaaagttctgggagttgcaggggtgttcc
ctgaagattcctcatgtggaaaggaagatattggacctgtatcaactcaacaagaatgtt
gcagatgagggcggatttgatattgtgtgtcgcgatagacgttggacggcgattgcgctt
aagatgggctttgctcctggcaaggctgttggctctcacttacggtcacactatgagaga
cttctctacccctacaacctcttccagagtggagccaacctcctggcaccagagcttgcg
tccaagctgatgcgtttagtgtctgctcctgaacttgacacgtttgtccaggagccaacc
ctgccagttgacacgagtgacaaggagtgtaaaccccctgacttgaccgagaggcagcac
tttgttgagccaaccgagtcctgctgcaacagcgcccacagagcaaagtggatgagagct
gaggtggatgaccttgtcgtacagagccacacacacttgtcagaagaactcctcttaaaa
ccatcaggttgtgtgaagacagaaccaggaactgaaccctgtgaaaacaacagaccaaat
ctgaggaggaggatgggctcttttgttgccaagcccgagccagacattcccattctagtg
aaacaagaacccatcgagccggtgagcgaggcagacaaaaacaagtctcgatataagaaa
aaaacaagtattgatgccccacctcctgcagtgagtgtagtggacctgtatatgtgtctg
gtgtgtggcagcgggagtgacgaggatcgtcttctgttgtgtgatggctgtgatgccagt
taccacacattctgtctcataccccctctacacgacatccccaaaggagactggaggtgc
cccaagtgcctggctcaagagtgcagcaaacctcaggaggcatttggctttgagcaagca
tacagggactactctttgcgggcttttggagaaatggcagactccttcaaatctgattac
ttcaacatgccagttcatatggttcccacagagttggtagaaaaagagttctggcgcttg
gtgagcaccatcgaagaggacgtcacagtggagtacggagcagatatagcctccaaggag
tttgggagcgggttccccatcaagaatggaagatttaaggtttcagaaaaggatgagaag
tacctgaattgtggctggaacctgaacaacatggcgatgatggacccgtcagtgttgact
catgtcacagcagacatctgtgggatgacgctaccttggctctatgtaggcatgtgcttc
tcctccttctgctggcacatcgaggaccactggagctactccatcaactacctgcactgg
ggggaaccgaagacatggtatggagcacctggctttgctgcagaacagttggaggctgtg
atgaagaaactagctccagagctgtttcagattcagccagatctcctccaccaactggtc
accatcatgaaccccaacaccctcatgtcctacggggttccgatttacagaaccaatcag
tgtgctggtgagtttgtcatcactttccccagagcctatcacagtggtttcaaccaaggt
tttaacttcgctgaggctgtcaacttctgcactgtggactggatggcattaggccgccaa
tgcgttgaccactacagactgctgcatcggtactgtgttttctcccacgacgagatgatc
tgcaagatggcctccaaggccaacagtctggatgtggtcctggcgtcggctgtccagaag
gatatgaaggatatgatcagagaggaacaggacctacgagataaagtccgcaagatgggg
gtgttgcattgtgagcaggcggaatacgatctcctgcaggatgatgagcggcagtgtgcc
aaatgtaggaccacctgtttcctgtctgccatcacctgcccctgcagccccggccagctg
gtctgtctccaccacatccaggacctctgctcctgccccctcaccaactacacactgaat
tatagatttacactggatgatctgtaccccatgatgaatgtggtgaagcagcgagctgag
tcctacgacgagtgggcatcccgcgtaacggagactctggaggctaagctggacaagaaa
aaaagcttgtcagtcttccgctccctcattaacgaatcagagtccaagatgttccctgac
aatgacctcttgcgtcagctccgtttagtcacacaggatgcagagaagtgcttctcagtg
gcccagcagctactcaacggcaaaaggcagactaggtatcggtgtggtggggggaagacc
cagagccagctgaccgtgcaggagctgaggtcatttgtcaggcaactttacaacatccct
tgcagccttcctcaagcccccaaattaaaggatctcttgaattgcatcgaagacttccag
cagcacagtgagaaagttctgatggatgaggccaccggcacagcggtgatccagagtctt
ctagacgttagctttgactttgatgtggagctgcctgaacttccgatactacgggagagg
ctggagcaagcccgttggctggagggtgtgcagcagaccagcgcccagccctccaccctc
accctggagaccatgcggaggctgatagaccagggtgtgggcctgacccctcacccctct
gtggagaaggccatggctcatctgcaggagctgctcacggtgtctgaacattgggaggaa
aagaccagcatcctcctcaaggccaggccccccccatctatagaagtcctctctgaagca
gctgagaaggtggtgggtatacctgcttacctccccaactgtatgatgctgaaggactcc
atcagtagggccagggagtggcttcaggaagcagaggcatttcaggatggagattccatt
ccattgtttgacgagctctctgatatggttatacgaggacaagccatcccagtccagctg
gaccctctaaaacatctagagtttctggtagcagagctgcaggcctggaaagagtctgct
gctaaaattttcctcatcaaaaactctcacttcactctacttgaggttctgtgtccaaga
tttgaggttggagcagggtctccgaaaaggaagtcaaaaaaagctaaagactgcagtaag
aagaagatggtgaagctagactgtctcagtgatgtggaaaaagctctcttagagaccaag
gacactacctcagctctggcaactctcggggaagtgcggttacgggagatgtgggccctc
tcctccctccgggcagctaacgagtccaagctcctccctacggcagactgcatggacctg
aaggtgtgtgtgtgtcagaatccccccatgggagccatgttacagtgtgagctctgccgg
gacgccttccacagcgtgtgtgtgagggctccctcagactcccgttcagcccaggcctgg
ctgtgtccagactgccgacgctcggagaagccccccctggacaaggtcatgcccttgctg
gcgtcgctgcagcgtattcaggtgcgtctaccggaaggcgatgcgcttcactatttggtt
gagagaacagtcagctggcaacaccgtgcgcgacaggtctcggcctcctgtggccttcca
gacctggaggagaactttacaacttcaccatctccggttggaaagccaccatgtttgact
ccagagtggaacaggacaagtcatgatcagatggtcttctacactgagcaacgatgcatt
cctctgcagggtctgagtgtggagctggaggagctgatggtggaagggctcctgctgcag
gtgtctctgccagagatcacacagctctaccatgtgttactgaacgggctgggaacgcat
cacacccacggacgcacgtcacagcaagaggacgacccctcgggctgtgacaaacgcaag
cagtgcaactctcagggaagaagctctccacaaaaagaggatggcctgaaaaaggaagta
gttaacggagtagagaagaaggccaagcgacgcctggagagggaggctctggagacagag
cgcagggacaaggccaagaagctccaaaacaagagacagaaaatgaacaaggagaagaac
ctggaacgcagggcagcctcgacctcctcatctcctcgttccgacttctcccagtcagac
gactctgaagaggagatggccatgtgtccagcagagggatgccagcagccagaaggagat
gaggtggactgggtccagtgtgacggcagctgtaaccagtggttccaccaggtctgtgtg
ggtgtgacagccgagttggctgagaaagaggactatgtgtgtgtcagctgtacaataagc
gatggccgctga

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