Salmo trutta (river trout): 115168601
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Entry
115168601 CDS
T08542
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 19-like isoform X1
KO
K11847
ubiquitin carboxyl-terminal hydrolase 19 [EC:
3.4.19.12
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
stru01002
]
115168601
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115168601
Enzymes [BR:
stru01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115168601
Peptidases and inhibitors [BR:
stru01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
115168601
Ubiquitin system [BR:
stru04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
115168601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP19_linker
UCH_1
zf-MYND
CS
USP7_C2
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
115168601
NCBI-ProteinID:
XP_029579887
Ensembl:
ENSSTUG00000028807
LinkDB
All DBs
Position
30:complement(37521007..37555530)
Genome browser
AA seq
1518 aa
AA seq
DB search
MASSSESGRRNGGQRSADDSTSKKKQKDRANQESREAKRAAAGANAEHKKDVFVDWKQNA
NEVIARLRCGDGVQRVEDVTTTFTDTYCQARFPDGHQWDCHLHEEIEGSCSKVQYKEKSG
FLLLVMHKKIPFHSWPSLMQNKKEKQSVKVEAKNGKDQKQPPLVKPVVKPEKSVPETADM
AELSAQTSAPPAQCEQRRGKAERGVKRIMNYKPADRPESGVKAGGEGQTKPVSVSKGDLP
QEPSAKRTVHPPKDPTSEMPRDTHSKSTSNGKPHSPTGRDLQTSTAGDNRAELLGNGHEG
TTPEVAVSHTQQELKVQMEDKKAPESDFKAGAEEVIIPAATVSSAEISPKAGASTNRTER
PGEAERTDSETLVRQPPNEADQATETLTPTIQSGSGKPVTATATKQAESPNSSSTQEEKR
DRSKEEPLEMKQEEAVPEPMVNLKLLKNDSYEKGTDLMVVNVYMKGIFRETARVIFREQD
FTLIFQTSDANFLRLHADCGANTVFKWQVKLRNLIQPEQSTYAFTPSRLDITLKKRHSQR
WGGLEAPATQGAVGGAKVAVPSAPSSQASQPGSSKHSLPAKEEPPWVGEGKPKPPRTVDG
CLDSVSSRTVSDHVPIKQEPAVTPKPTCMVQPMTHAPPAGSQRSVEEEEEEEEEKVCLPG
FTGLVNLGNTCFMNSVIQSLSNTRELRDYFHDRAFENEINCNNPLGTGGRLAIGFAVLLR
ALWKGTHHAFQPSKLKAIVACKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTET
VDSDGRLDEVGEIKVVADEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCSKVSITFDPFL
YLPVPLPQKQKVLTVFYFAKEPHKKPMKFLVSVSKENSSTAEVLESISRSVRIKAENLRL
AEVVKSRFHRIFLPSNSLDTVSSSDMLFCFEVLSKELAKERVVVLRVQQRPQVPSIPISK
CAACLKPPLSDEEKLKRCTRCYRVGYCNQVCQKKHWSSHKVLCGPNIENVGLPFLVSVPE
SRLTYARLSQLLEGYSRYSVNVFQPPFQSGRTSPEVTQCLADLPPPAETPEGVGSGDKAR
GGGGGAGDSEQEDSSLVPESPLETAQASAHPAGDPAGDPDALSTHTTDSGFIEPSSGSQD
SQGEKETSCEKAVRPEGKAAVTGYQQPSESASSHTSQFYITILHSNSKEQTLEEKEEAVL
DLPEDSSLELVWKNNERLKEYVLVRSKELEFEEDPGSVNETARAGHFTLEQCLNLFTRPE
VLAPEEAWYCPKCQQHREASKQLLLWRLPNVLIIQLKRFSFRSFIWRDKINDMVDFPIRN
LDLSKFCIGQKDDMQQPPIYDLYAVINHYGGMIGGHYTAYARLPSAQNSQRSDVGWRLFD
DSTVTMVEESQVVTRYAYVLFYRRRNSPVERPPRLLGPLGAESPTAAGATASQASLIWQE
LEQEEEGVEEGPRGLFRPRLGRRRAARREEGVEGQVWRLLRQRIPHYSDDDCVRYFVLGT
LAALLALLVNLLYRANWG
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atggccagcagcagtgagtcaggccggcggaatgggggtcagcgcagcgcagatgacagc
accagcaagaagaagcagaaggacagggccaaccaggagagcagggaggccaagcgagca
gcagcaggggccaacgcagagcacaagaaagatgtgtttgtggactggaagcagaatgct
aatgaggtgatcgcgaggctgcgctgtggagacggggtgcagagggtggaggacgtcacc
actaccttcaccgacacatactgtcaggcccgcttcccagatgggcaccagtgggactgt
catctgcatgaggagattgagggctcctgcagcaaagtgcagtacaaagagaagagtggc
ttcctcctgctggtcatgcacaagaagatccccttccactcctggccttcccttatgcaa
aataaaaaggagaagcagtctgtgaaagtggaggccaagaacggtaaagaccagaaacag
ccgccgctggtaaagcctgtggtaaagcctgagaagtctgtcccggagacggcagacatg
gccgaactgtccgcccagacgtctgctccaccggcacagtgtgaacagaggcgtggcaaa
gcagagcgaggtgtcaaacgcatcatgaactacaaaccagccgacaggccagagtctggg
gtgaaggctggaggagaggggcagaccaagccggtcagtgtcagtaaaggggacctgcct
caggagcccagtgccaagcgcactgtccatccccccaaggaccccacctcagagatgccc
agggatacacactccaagtccacatccaatgggaaaccacacagccccactggccgggac
ctccagacatctacagctggtgacaatcgagctgagctgctaggcaatggccatgagggt
acaacacctgaggtagccgtcagccacacgcagcaggagttgaaagttcagatggaggac
aagaaggccccagagtctgatttcaaggctggtgcagaagaggtaatcataccggcagcc
actgtgtccagtgctgagatcagccccaaggctggagcctccaccaacagaacagagagg
ccaggggaggctgagaggactgactctgagacgctagtgagacagcctccgaatgaggct
gaccaggccactgagactctaacaccaaccatacagtcaggatcagggaagcctgtgact
gcaacagccaccaagcaggctgagtcccccaacagcagcagcacacaggaggagaagaga
gacaggtctaaggaggaacctctggagatgaagcaggaggaagctgttccagagccaatg
gtgaacctgaagttgttgaagaacgactcgtacgagaaagggacagacctgatggttgtc
aacgtgtacatgaagggtatcttcagagagacagccagggtgatcttcagggaacaggac
ttcacactcatcttccagaccagcgatgcaaatttcttgcgtcttcatgcggactgcgga
gcgaatactgtctttaagtggcaagtcaaactccggaacctcatccagcctgaacagtct
acgtatgccttcaccccgtcccgtttagacatcaccctgaagaagaggcacagccagcgc
tgggggggcctggaggcccctgcaacacaaggtgcagtgggtggcgccaaggttgctgtg
ccctccgcaccgtcctctcaggcaagtcagccgggcagcagcaagcactccctccctgcc
aaggaggagccaccctgggtgggggaggggaaacccaagccccctcggacagtggacgga
tgcctggacagtgtgtcatcccgcaccgtctcagaccatgtccccatcaaacaggagcct
gcagtcacgcccaagcccacctgtatggtccagcccatgacccacgcacctcctgccggc
agccagcgcagcgttgaggaggaagaggaggaggaggaggagaaggtgtgtctgccaggc
ttcacaggcctggtcaacctgggcaacacatgctttatgaacagcgttatccagtctctg
tccaacacccgggaactcagggactactttcatgaccgggcgtttgagaatgagatcaac
tgtaataacccgttggggacgggtggtcggctggccatcgggttcgctgtgctgctccgg
gctttgtggaagggtacccaccatgcgtttcagccctctaagttaaaggcgatcgtggcc
tgtaaggccagtcagtttacaggctatgcccagcacgatgcccaggagttcatggccttc
ctcctggatgggctccacgaggacctgaaccgcatccagaacaagccctacacagagacc
gtggactcagacggacggctggacgaggtgggtgaaataaaggtggtggcagatgaggcg
tggcagaggcacaagatgagaaacgactcgttcatcgtagacctctttcagggccagtac
aaatccaagctcgtctgcccagtgtgctccaaggtttccataacctttgacccattcctc
taccttcccgtgcccctgccccagaagcagaaggtcctcaccgtgttctactttgctaaa
gagcctcacaagaaacccatgaagttcctggtgagtgtgagtaaagagaactcgagcaca
gccgaggtcctggagtccatctctcggagtgtgaggatcaaggcagagaacttgagactg
gctgaggtagtgaagagtcgcttccatcggatctttctcccatccaactccctggacacg
gtctcctcctcagacatgctcttctgcttcgaagtgctgtctaaagagctggccaaggag
agggtggtggtgctccgagtccagcagaggcctcaggtccccagtattcccatctctaag
tgtgctgcctgcctgaagcctcctctctcggatgaagagaaactgaagcgatgtacccgc
tgctaccgcgtgggttactgcaaccaggtttgccagaaaaaacattggtccagccacaag
gttctgtgtgggcccaacatagagaacgtggggcttcccttcctggtcagcgtccctgag
tccagactcacctacgcccggctgtcccagctgctggaaggatattcaaggtattcagtg
aacgtgttccagcctcccttccagtctggcaggacgtccccagaggtcacccagtgcctg
gctgaccttccccctccagcagagacccctgaaggtgtggggtcaggggataaggccagg
ggcggtgggggtggggcaggggactcagagcaggaggactcctctctggttcctgagtct
ccactagagacagcccaggcctcagcacatccagccggagacccagccggagacccagac
gccctctccacccacaccacagactcaggtttcattgagccctcctctggctcccaggac
tcccagggagagaaggagacctcctgtgagaaggctgtcagaccagaaggtaaagctgct
gtgaccggctaccagcaaccatcagagtctgcgtccagccacacctctcagttctacatc
accatcctccactccaacagcaaggaacagacactggaggaaaaggaagaggccgttctg
gacctccctgaggactccagcctggagctggtgtggaagaacaacgagcgtctcaaggag
tatgtcctggttcggtccaaggagctggaatttgaggaggaccctgggtcggtcaacgag
acggccagggctggacacttcaccctggagcagtgcctcaacctcttcactaggcctgag
gtgctggcaccagaggaggcatggtactgtccaaagtgccagcagcacagagaggcctcc
aagcagctgctgctatggcgtctgcccaacgtcctcatcatccagctcaaacgcttctcc
ttccgcagcttcatctggagggacaagatcaacgacatggtcgacttccccatcaggaac
ctagacctcagtaagttctgtattggtcagaaggacgacatgcagcagccgcctatctat
gacctctatgcagtcatcaatcactacgggggcatgatcggaggtcactacactgcctac
gcacgcctgcccagcgcccagaacagccagcgcagtgatgttggctggcgtctttttgat
gacagtacggtgacgatggtggaggagagccaggtggtgacacgctatgcctacgtgctg
ttctaccgccgtcgcaactcccctgtggaacgaccacctcgcttactggggcccctgggg
gccgagtcccccaccgctgcaggagccaccgccagccaggcatctctgatatggcaggaa
ctggagcaggaagaggagggtgttgaagagggcccccggggcctgttccgtcccaggctg
gggaggagaagagcagccaggagggaggagggggtggaggggcaggtgtggcggctgctg
cgccaaaggatcccgcattattccgatgacgactgtgtccgatattttgtcctgggtacc
ttggctgctctactagcgttgttagtgaacctactctacagagccaactggggctaa
DBGET
integrated database retrieval system
